RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W GEF1P37020 779 aa7.87□□□□□ -1.15
CTF3YLR381W SPP381P38282 291 aaPredicted RBP7.87□□□□□ -1.15
CTF3YLR381W VMA22P38784 181 aa7.87□□□□□ -1.15
CTF3YLR381W FYV8P46949 817 aaKnown RBP7.87□□□□□ -1.15
CTF3YLR381W URB2P47108 1174 aa7.87□□□□□ -1.15
CTF3YLR381W YJR054WP47114 497 aa7.87□□□□□ -1.15
CTF3YLR381W UBA2P52488 636 aa7.87□□□□□ -1.15
CTF3YLR381W VPS16Q03308 798 aa7.87□□□□□ -1.15
CTF3YLR381W YML082WQ04533 649 aaKnown RBP7.87□□□□□ -1.15
CTF3YLR381W CSR1Q06705 408 aaKnown RBP7.87□□□□□ -1.15
CTF3YLR381W OSW1Q08692 278 aa7.87□□□□□ -1.15
CTF3YLR381W RTP1Q12751 981 aa7.87□□□□□ -1.15
CTF3YLR381W PDC1P06169 563 aaKnown RBP7.87□□□□□ -1.15
CTF3YLR381W PDE2P06776 526 aa7.87□□□□□ -1.15
CTF3YLR381W KGD2P19262 463 aaPredicted RBP7.87□□□□□ -1.15
CTF3YLR381W MSB1P21339 1137 aaKnown RBP7.87□□□□□ -1.15
CTF3YLR381W PYC2P32327 1180 aaKnown RBP7.87□□□□□ -1.15
CTF3YLR381W PLC1P32383 869 aa7.87□□□□□ -1.15
CTF3YLR381W SLA2P33338 968 aa7.87□□□□□ -1.15
CTF3YLR381W RCN1P36054 211 aa7.87□□□□□ -1.15
CTF3YLR381W MCX1P38323 520 aaPredicted RBP7.87□□□□□ -1.15
CTF3YLR381W TMN3P40071 706 aa7.87□□□□□ -1.15
CTF3YLR381W ESL1P40456 1118 aa7.87□□□□□ -1.15
CTF3YLR381W RNR4P49723 345 aaKnown RBP7.87□□□□□ -1.15
CTF3YLR381W CTF18P49956 741 aa7.87□□□□□ -1.15
CTF3YLR381W CTF4Q01454 927 aa7.87□□□□□ -1.15
CTF3YLR381W JIP5Q06214 492 aaPredicted RBP7.87□□□□□ -1.15
CTF3YLR381W OPY2Q06810 360 aa7.87□□□□□ -1.15
CTF3YLR381W ALR1Q08269 859 aa7.87□□□□□ -1.15
CTF3YLR381W UIP4Q08926 304 aa7.87□□□□□ -1.15
CTF3YLR381W ACF2Q12168 779 aa7.87□□□□□ -1.15
CTF3YLR381W DUR1,2P32528 1835 aaKnown RBP7.87□□□□□ -1.15
CTF3YLR381W YOR093CQ12275 1648 aa7.86□□□□□ -1.15
CTF3YLR381W LAM4P38800 1345 aa7.86□□□□□ -1.15
CTF3YLR381W RPB2P08518 1224 aaKnown RBP7.86□□□□□ -1.15
CTF3YLR381W UBA1P22515 1024 aaKnown RBP7.86□□□□□ -1.15
CTF3YLR381W CNA1P23287 553 aa7.86□□□□□ -1.15
CTF3YLR381W MNN2P38069 597 aa7.86□□□□□ -1.15
CTF3YLR381W MRX3P38172 270 aa7.86□□□□□ -1.15
CTF3YLR381W MDV1P47025 714 aa7.86□□□□□ -1.15
CTF3YLR381W OCA1P50946 238 aaPredicted RBP7.86□□□□□ -1.15
CTF3YLR381W MCM6P53091 1017 aaKnown RBP7.86□□□□□ -1.15
CTF3YLR381W DYN3Q04949 312 aa7.86□□□□□ -1.15
CTF3YLR381W MDM36Q06820 579 aa7.86□□□□□ -1.15
CTF3YLR381W LEU1P07264 779 aaKnown RBP7.86□□□□□ -1.15
CTF3YLR381W LPD1P09624 499 aaKnown RBP7.86□□□□□ -1.15
CTF3YLR381W CLB2P24869 491 aa7.86□□□□□ -1.15
CTF3YLR381W UBC6P33296 250 aaPredicted RBP7.86□□□□□ -1.15
CTF3YLR381W MKT1P40850 830 aaKnown RBP7.86□□□□□ -1.15
CTF3YLR381W UBP6P43593 499 aaKnown RBP7.86□□□□□ -1.15
CTF3YLR381W ATP25Q03153 612 aa7.86□□□□□ -1.15
CTF3YLR381W MEU1Q07938 337 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
CTF3YLR381W YOL036WQ08206 761 aa7.86□□□□□ -1.15
CTF3YLR381W YOR352WQ08816 343 aa7.86□□□□□ -1.15
CTF3YLR381W SMC1P32908 1225 aa7.85□□□□□ -1.15
CTF3YLR381W JNM1P36224 373 aa7.85□□□□□ -1.15
CTF3YLR381W MAL33P38157 468 aa7.85□□□□□ -1.15
CTF3YLR381W PCF11P39081 626 aaPredicted RBP7.85□□□□□ -1.15
CTF3YLR381W MDR1P53258 950 aa7.85□□□□□ -1.15
CTF3YLR381W SEC10Q06245 871 aa7.85□□□□□ -1.15
CTF3YLR381W ATG13Q06628 738 aa7.85□□□□□ -1.15
CTF3YLR381W SOG2Q08817 791 aa7.85□□□□□ -1.15
CTF3YLR381W ELG1Q12050 791 aa7.85□□□□□ -1.15
CTF3YLR381W YRM1Q12340 786 aa7.85□□□□□ -1.15
CTF3YLR381W YBL113CQ7M4S9 792 aa7.85□□□□□ -1.15
CTF3YLR381W VTH1P40438 1549 aa7.85□□□□□ -1.15
CTF3YLR381W VTH2P40890 1549 aa7.85□□□□□ -1.15
CTF3YLR381W RPS3P05750 240 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W MVD1P32377 396 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W SSE1P32589 693 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W PGM2P37012 569 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W SNL1P40548 159 aa7.84□□□□□ -1.15
CTF3YLR381W NOP9P47077 666 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W BFA1P47113 574 aa7.84□□□□□ -1.15
CTF3YLR381W SSN8P47821 323 aa7.84□□□□□ -1.15
CTF3YLR381W YGR054WP53235 642 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W CEG1Q01159 459 aaPredicted RBP7.84□□□□□ -1.15
CTF3YLR381W LAM6Q08001 693 aa7.84□□□□□ -1.15
CTF3YLR381W POM152P39685 1337 aa7.84□□□□□ -1.15
CTF3YLR381W RPO21P04050 1733 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W TEF1P02994 458 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W REC107P21651 314 aa7.84□□□□□ -1.15
CTF3YLR381W PHO3P24031 467 aa7.84□□□□□ -1.15
CTF3YLR381W SMI1P32566 505 aa7.84□□□□□ -1.15
CTF3YLR381W YKT6P36015 200 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W ULP2P40537 1034 aaPredicted RBP7.84□□□□□ -1.15
CTF3YLR381W IRR1P40541 1150 aa7.84□□□□□ -1.15
CTF3YLR381W ALT1P52893 592 aa7.84□□□□□ -1.15
CTF3YLR381W SNZ1Q03148 297 aa7.84□□□□□ -1.15
CTF3YLR381W YPL277CQ08989 487 aa7.84□□□□□ -1.15
CTF3YLR381W DCS2Q12123 353 aa7.84□□□□□ -1.15
CTF3YLR381W GET4Q12125 312 aa7.84□□□□□ -1.15
CTF3YLR381W YLR125WQ12138 136 aa7.84□□□□□ -1.15
CTF3YLR381W TAF3Q12297 353 aa7.84□□□□□ -1.15
CTF3YLR381W RIB2Q12362 591 aaKnown RBP7.84□□□□□ -1.15
CTF3YLR381W PIF1P07271 859 aa7.83□□□□□ -1.16
CTF3YLR381W RPA135P22138 1203 aaKnown RBP7.83□□□□□ -1.16
CTF3YLR381W APL1P27351 700 aa7.83□□□□□ -1.16
CTF3YLR381W APS3P47064 194 aa7.83□□□□□ -1.16
CTF3YLR381W USA1Q03714 838 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms