RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C YDJ1P25491 409 aaKnown RBP10.93□□□□□ -0.66
ARP6YLR085C PER1P25625 357 aa10.93□□□□□ -0.66
ARP6YLR085C RPN3P40016 523 aaKnown RBP10.93□□□□□ -0.66
ARP6YLR085C ATG3P40344 310 aa10.93□□□□□ -0.66
ARP6YLR085C SEC5P89102 971 aa10.93□□□□□ -0.66
ARP6YLR085C VPS60Q03390 229 aa10.93□□□□□ -0.66
ARP6YLR085C ISU2Q12056 156 aa10.93□□□□□ -0.66
ARP6YLR085C FKS1P38631 1876 aaKnown RBP10.93□□□□□ -0.66
ARP6YLR085C SPO12P17123 173 aa10.92□□□□□ -0.66
ARP6YLR085C DAL7P21826 554 aa10.92□□□□□ -0.66
ARP6YLR085C ESS1P22696 170 aa10.92□□□□□ -0.66
ARP6YLR085C UBP11P36026 717 aa10.92□□□□□ -0.66
ARP6YLR085C VAB2P40003 282 aa10.92□□□□□ -0.66
ARP6YLR085C VFA1P40080 203 aa10.92□□□□□ -0.66
ARP6YLR085C HFM1P51979 1187 aa10.92□□□□□ -0.66
ARP6YLR085C TOF1P53840 1238 aa10.92□□□□□ -0.66
ARP6YLR085C ALD6P54115 500 aaKnown RBP10.92□□□□□ -0.66
ARP6YLR085C FUS2Q05670 677 aa10.92□□□□□ -0.66
ARP6YLR085C COG4Q06096 861 aa10.92□□□□□ -0.66
ARP6YLR085C SPH1Q06160 661 aa10.92□□□□□ -0.66
ARP6YLR085C PUS5Q06244 254 aa10.92□□□□□ -0.66
ARP6YLR085C MTF2P10849 440 aa10.91□□□□□ -0.66
ARP6YLR085C MAK16P10962 306 aaPredicted RBP10.91□□□□□ -0.66
ARP6YLR085C MRF1P30775 413 aaPredicted RBP10.91□□□□□ -0.66
ARP6YLR085C STO1P34160 861 aaKnown RBP10.91□□□□□ -0.66
ARP6YLR085C SHP1P34223 423 aa10.91□□□□□ -0.66
ARP6YLR085C MCD4P36051 919 aa10.91□□□□□ -0.66
ARP6YLR085C SEC9P40357 651 aa10.91□□□□□ -0.66
ARP6YLR085C CEP3P40969 608 aa10.91□□□□□ -0.66
ARP6YLR085C HUL4P40985 892 aa10.91□□□□□ -0.66
ARP6YLR085C GPD2P41911 440 aaKnown RBP10.91□□□□□ -0.66
ARP6YLR085C NBP1P52919 319 aaPredicted RBP10.91□□□□□ -0.66
ARP6YLR085C CAF130P53280 1122 aaPredicted RBP10.91□□□□□ -0.66
ARP6YLR085C ALF1P53904 254 aa10.91□□□□□ -0.66
ARP6YLR085C DUS3Q06053 668 aaKnown RBP10.91□□□□□ -0.66
ARP6YLR085C YDL057WQ07379 328 aa10.91□□□□□ -0.66
ARP6YLR085C WHI4Q07655 649 aaKnown RBP10.91□□□□□ -0.66
ARP6YLR085C PGK1P00560 416 aaKnown RBP10.9□□□□□ -0.66
ARP6YLR085C CDC60P26637 1090 aaKnown RBP10.9□□□□□ -0.66
ARP6YLR085C YKR018CP36114 725 aa10.9□□□□□ -0.66
ARP6YLR085C XDJ1P39102 459 aa10.9□□□□□ -0.66
ARP6YLR085C CCM1P48237 864 aaPredicted RBP10.9□□□□□ -0.66
ARP6YLR085C YGL039WP53183 348 aaKnown RBP10.9□□□□□ -0.66
ARP6YLR085C UTP5Q04177 643 aaKnown RBP10.9□□□□□ -0.66
ARP6YLR085C CRD1Q07560 283 aa10.9□□□□□ -0.66
ARP6YLR085C GUD1Q07729 489 aa10.9□□□□□ -0.66
ARP6YLR085C YPL277CQ08989 487 aa10.9□□□□□ -0.66
ARP6YLR085C SCP160P06105 1222 aaKnown RBP RIP-Chip data10.89□□□□□ -0.67not detected
ARP6YLR085C SSB1P11484 613 aaKnown RBP10.89□□□□□ -0.67
ARP6YLR085C VMA2P16140 517 aaKnown RBP10.89□□□□□ -0.67
ARP6YLR085C APL1P27351 700 aa10.89□□□□□ -0.67
ARP6YLR085C CLB5P30283 435 aa10.89□□□□□ -0.67
ARP6YLR085C SUV3P32580 737 aa10.89□□□□□ -0.67
ARP6YLR085C UTR4P32626 227 aa10.89□□□□□ -0.67
ARP6YLR085C XRS2P33301 854 aa10.89□□□□□ -0.67
ARP6YLR085C MCR1P36060 302 aaKnown RBP10.89□□□□□ -0.67
ARP6YLR085C SSB2P40150 613 aaKnown RBP10.89□□□□□ -0.67
ARP6YLR085C SHQ1P40486 507 aaPredicted RBP10.89□□□□□ -0.67
ARP6YLR085C IES1P43579 692 aa10.89□□□□□ -0.67
ARP6YLR085C ERG5P54781 538 aa10.89□□□□□ -0.67
ARP6YLR085C GIR2Q03768 265 aaPredicted RBP10.89□□□□□ -0.67
ARP6YLR085C PHM6Q05637 104 aa10.89□□□□□ -0.67
ARP6YLR085C TCO89Q08921 799 aa10.89□□□□□ -0.67
ARP6YLR085C PLP2Q12017 286 aa10.89□□□□□ -0.67
ARP6YLR085C MED1Q12321 566 aa10.89□□□□□ -0.67
ARP6YLR085C UBC1P21734 215 aaKnown RBP10.88□□□□□ -0.67
ARP6YLR085C CDC48P25694 835 aaKnown RBP10.88□□□□□ -0.67
ARP6YLR085C PDC6P26263 563 aaKnown RBP10.88□□□□□ -0.67
ARP6YLR085C TRK2P28584 889 aa10.88□□□□□ -0.67
ARP6YLR085C NIP100P33420 868 aa10.88□□□□□ -0.67
ARP6YLR085C SMC2P38989 1170 aaKnown RBP10.88□□□□□ -0.67
ARP6YLR085C NDC80P40460 691 aa10.88□□□□□ -0.67
ARP6YLR085C CTR1P49573 406 aa10.88□□□□□ -0.67
ARP6YLR085C NCS2P53923 493 aaPredicted RBP10.88□□□□□ -0.67
ARP6YLR085C OPY2Q06810 360 aa10.88□□□□□ -0.67
ARP6YLR085C TY1B-AO13527 1196 aaKnown RBP10.87□□□□□ -0.67
ARP6YLR085C SMC1P32908 1225 aa10.87□□□□□ -0.67
ARP6YLR085C FIS1P40515 155 aa10.87□□□□□ -0.67
ARP6YLR085C TCB2P48231 1178 aa10.87□□□□□ -0.67
ARP6YLR085C RRT6P53117 311 aaPredicted RBP10.87□□□□□ -0.67
ARP6YLR085C ZPR1P53303 486 aaKnown RBP10.87□□□□□ -0.67
ARP6YLR085C PTA1Q01329 785 aaPredicted RBP10.87□□□□□ -0.67
ARP6YLR085C YML082WQ04533 649 aaKnown RBP10.87□□□□□ -0.67
ARP6YLR085C CDC73Q06697 393 aa10.87□□□□□ -0.67
ARP6YLR085C MCM16Q12262 181 aa10.87□□□□□ -0.67
ARP6YLR085C PPR1P07272 904 aaPredicted RBP10.86□□□□□ -0.67
ARP6YLR085C PCK1P10963 549 aa10.86□□□□□ -0.67
ARP6YLR085C SEC23P15303 768 aaKnown RBP10.86□□□□□ -0.67
ARP6YLR085C DBP5P20449 482 aaKnown RBP10.86□□□□□ -0.67
ARP6YLR085C PRP22P24384 1145 aaKnown RBP10.86□□□□□ -0.67
ARP6YLR085C UBP13P38187 747 aa10.86□□□□□ -0.67
ARP6YLR085C UBP5P39944 805 aa10.86□□□□□ -0.67
ARP6YLR085C SMC3P47037 1230 aa10.86□□□□□ -0.67
ARP6YLR085C SWI6P09959 803 aa10.85□□□□□ -0.67
ARP6YLR085C YEL1P34225 687 aa10.85□□□□□ -0.67
ARP6YLR085C ATG19P35193 415 aa10.85□□□□□ -0.67
ARP6YLR085C CAB3P36076 571 aa10.85□□□□□ -0.67
ARP6YLR085C PGM2P37012 569 aaKnown RBP10.85□□□□□ -0.67
ARP6YLR085C REI1P38344 393 aaPredicted RBP10.85□□□□□ -0.67
ARP6YLR085C PRP31P49704 494 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms