RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C VPS75P53853 264 aa6.27□□□□□ -1.41
SSK1YLR006C FOX2Q02207 900 aaKnown RBP6.27□□□□□ -1.41
SSK1YLR006C HOT1Q03213 719 aa6.27□□□□□ -1.41
SSK1YLR006C NSE5Q03718 556 aa6.27□□□□□ -1.41
SSK1YLR006C SAS4Q04003 481 aa6.27□□□□□ -1.41
SSK1YLR006C HCR1Q05775 265 aaKnown RBP6.27□□□□□ -1.41
SSK1YLR006C YLR125WQ12138 136 aa6.27□□□□□ -1.41
SSK1YLR006C POM152P39685 1337 aa6.26□□□□□ -1.41
SSK1YLR006C PDC1P06169 563 aaKnown RBP6.26□□□□□ -1.41
SSK1YLR006C MSH3P25336 1018 aa6.26□□□□□ -1.41
SSK1YLR006C SAP190P36123 1033 aa6.26□□□□□ -1.41
SSK1YLR006C RTT107P38850 1070 aa6.26□□□□□ -1.41
SSK1YLR006C IRC8P47046 822 aa6.26□□□□□ -1.41
SSK1YLR006C APT1P49435 187 aaKnown RBP6.26□□□□□ -1.41
SSK1YLR006C RRB1Q04225 511 aaKnown RBP6.26□□□□□ -1.41
SSK1YLR006C AFT2Q08957 416 aa6.26□□□□□ -1.41
SSK1YLR006C SPO16P17122 198 aa6.26□□□□□ -1.41
SSK1YLR006C GFD2P25370 566 aaKnown RBP6.26□□□□□ -1.41
SSK1YLR006C MCM10P32354 571 aa6.26□□□□□ -1.41
SSK1YLR006C ACP1P32463 125 aa6.26□□□□□ -1.41
SSK1YLR006C NGR1P32831 672 aaKnown RBP6.26□□□□□ -1.41
SSK1YLR006C CRG1P38892 291 aaRIP-Chip data6.26□□□□□ -1.41not detected
SSK1YLR006C RET2P43621 546 aa6.26□□□□□ -1.41
SSK1YLR006C CSC1Q06538 782 aa6.26□□□□□ -1.41
SSK1YLR006C TLG2Q08144 397 aa6.26□□□□□ -1.41
SSK1YLR006C RAD59Q12223 238 aa6.26□□□□□ -1.41
SSK1YLR006C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
SSK1YLR006C SRF1Q12516 437 aa6.26□□□□□ -1.41
SSK1YLR006C CLB5P30283 435 aa6.25□□□□□ -1.41
SSK1YLR006C THI4P32318 326 aa6.25□□□□□ -1.41
SSK1YLR006C RME1P32338 300 aaKnown RBP6.25□□□□□ -1.41
SSK1YLR006C YKL100CP34248 587 aa6.25□□□□□ -1.41
SSK1YLR006C HAL5P38970 855 aaKnown RBP6.25□□□□□ -1.41
SSK1YLR006C POP2P39008 433 aa6.25□□□□□ -1.41
SSK1YLR006C YIR042CP40586 236 aa6.25□□□□□ -1.41
SSK1YLR006C HUL4P40985 892 aa6.25□□□□□ -1.41
SSK1YLR006C ROG3P43602 733 aa6.25□□□□□ -1.41
SSK1YLR006C VID30P53076 958 aa6.25□□□□□ -1.41
SSK1YLR006C UFD2P54860 961 aa6.25□□□□□ -1.41
SSK1YLR006C GFD1Q04839 188 aaKnown RBP6.25□□□□□ -1.41
SSK1YLR006C TSR2Q06672 205 aaKnown RBP6.25□□□□□ -1.41
SSK1YLR006C CSR1Q06705 408 aaKnown RBP6.25□□□□□ -1.41
SSK1YLR006C MPC54Q08550 464 aa6.25□□□□□ -1.41
SSK1YLR006C DCS2Q12123 353 aa6.25□□□□□ -1.41
SSK1YLR006C OSH2Q12451 1283 aa6.25□□□□□ -1.41
SSK1YLR006C GAL1P04385 528 aa6.25□□□□□ -1.41
SSK1YLR006C NPR1P22211 790 aa6.25□□□□□ -1.41
SSK1YLR006C CLB1P24868 471 aa6.25□□□□□ -1.41
SSK1YLR006C DEP1P31385 405 aa6.25□□□□□ -1.41
SSK1YLR006C TFB1P32776 642 aa6.25□□□□□ -1.41
SSK1YLR006C EDS1P38073 919 aa6.25□□□□□ -1.41
SSK1YLR006C HSM3P38348 480 aa6.25□□□□□ -1.41
SSK1YLR006C UBX7P38349 436 aa6.25□□□□□ -1.41
SSK1YLR006C SPT8P38915 602 aa6.25□□□□□ -1.41
SSK1YLR006C BFR1P38934 470 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
SSK1YLR006C STR2P47164 639 aa6.25□□□□□ -1.41
SSK1YLR006C RBA50Q04418 439 aa6.25□□□□□ -1.41
SSK1YLR006C GGA1Q06336 557 aa6.25□□□□□ -1.41
SSK1YLR006C NTG2Q08214 380 aa6.25□□□□□ -1.41
SSK1YLR006C REC8Q12188 680 aa6.25□□□□□ -1.41
SSK1YLR006C CYT1P07143 309 aa6.24□□□□□ -1.41
SSK1YLR006C CDC6P09119 513 aa6.24□□□□□ -1.41
SSK1YLR006C CLN2P20438 545 aa6.24□□□□□ -1.41
SSK1YLR006C CBP3P21560 335 aa6.24□□□□□ -1.41
SSK1YLR006C VPS1P21576 704 aaKnown RBP6.24□□□□□ -1.41
SSK1YLR006C MRM1P25270 412 aa6.24□□□□□ -1.41
SSK1YLR006C ADE17P38009 592 aaKnown RBP6.24□□□□□ -1.41
SSK1YLR006C REI1P38344 393 aaPredicted RBP6.24□□□□□ -1.41
SSK1YLR006C LRP1P38801 184 aaKnown RBP6.24□□□□□ -1.41
SSK1YLR006C ALA1P40825 983 aaKnown RBP6.24□□□□□ -1.41
SSK1YLR006C KXD1P53158 218 aa6.24□□□□□ -1.41
SSK1YLR006C RSC58Q07979 502 aa6.24□□□□□ -1.41
SSK1YLR006C ESC8Q08119 714 aa6.24□□□□□ -1.41
SSK1YLR006C GET3Q12154 354 aaKnown RBP6.24□□□□□ -1.41
SSK1YLR006C MCM16Q12262 181 aa6.24□□□□□ -1.41
SSK1YLR006C YKL068W-AQ3E826 78 aa6.24□□□□□ -1.41
SSK1YLR006C CHO2P05374 869 aaKnown RBP6.23□□□□□ -1.41
SSK1YLR006C PHO4P07270 312 aaKnown RBP6.23□□□□□ -1.41
SSK1YLR006C COQ1P18900 473 aa6.23□□□□□ -1.41
SSK1YLR006C UBC1P21734 215 aaKnown RBP6.23□□□□□ -1.41
SSK1YLR006C SWI4P25302 1093 aaKnown RBP6.23□□□□□ -1.41
SSK1YLR006C SEC65P29478 273 aa6.23□□□□□ -1.41
SSK1YLR006C MRE11P32829 692 aa6.23□□□□□ -1.41
SSK1YLR006C OTU2P38747 307 aaKnown RBP6.23□□□□□ -1.41
SSK1YLR006C DOT5P40553 215 aa6.23□□□□□ -1.41
SSK1YLR006C SGM1P47166 707 aa6.23□□□□□ -1.41
SSK1YLR006C YGR237CP50089 785 aa6.23□□□□□ -1.41
SSK1YLR006C MET14Q02196 202 aa6.23□□□□□ -1.41
SSK1YLR006C INM2Q05533 292 aa6.23□□□□□ -1.41
SSK1YLR006C THI3Q07471 609 aa6.23□□□□□ -1.41
SSK1YLR006C REC107P21651 314 aa6.23□□□□□ -1.41
SSK1YLR006C RPT3P33298 428 aaKnown RBP6.23□□□□□ -1.41
SSK1YLR006C MOT2P34909 587 aaKnown RBP6.23□□□□□ -1.41
SSK1YLR006C YKR075CP36155 307 aa6.23□□□□□ -1.41
SSK1YLR006C GDT1P38301 280 aaPredicted RBP6.23□□□□□ -1.41
SSK1YLR006C VPS8P39702 1274 aa6.23□□□□□ -1.41
SSK1YLR006C NDC80P40460 691 aa6.23□□□□□ -1.41
SSK1YLR006C CCM1P48237 864 aaPredicted RBP6.23□□□□□ -1.41
SSK1YLR006C YGR153WP48238 217 aa6.23□□□□□ -1.41
SSK1YLR006C HDA1P53973 706 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms