RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W HIS6P40545 261 aa2.92□□□□□ -1.94
SDC25YLL016W SAP185P40856 1058 aa2.92□□□□□ -1.94
SDC25YLL016W YJR096WP47137 282 aa2.92□□□□□ -1.94
SDC25YLL016W MET13P53128 600 aa2.92□□□□□ -1.94
SDC25YLL016W TSR2Q06672 205 aaKnown RBP2.92□□□□□ -1.94
SDC25YLL016W RRP6Q12149 733 aaKnown RBP2.92□□□□□ -1.94
SDC25YLL016W SRD1P09007 221 aa2.91□□□□□ -1.94
SDC25YLL016W PFK1P16861 987 aaKnown RBP2.91□□□□□ -1.94
SDC25YLL016W SFL1P20134 766 aa2.91□□□□□ -1.94
SDC25YLL016W KCC4P25389 1037 aa2.91□□□□□ -1.94
SDC25YLL016W DBF20P32328 564 aa2.91□□□□□ -1.94
SDC25YLL016W SWI3P32591 825 aa2.91□□□□□ -1.94
SDC25YLL016W NFU1P32860 256 aa2.91□□□□□ -1.94
SDC25YLL016W AMN1P38285 549 aaPredicted RBP2.91□□□□□ -1.94
SDC25YLL016W MGS1P40151 587 aa2.91□□□□□ -1.94
SDC25YLL016W YIL165CP40446 119 aa2.91□□□□□ -1.94
SDC25YLL016W TMA108P40462 946 aa2.91□□□□□ -1.94
SDC25YLL016W MNT3P40549 630 aa2.91□□□□□ -1.94
SDC25YLL016W YJL181WP46987 611 aa2.91□□□□□ -1.94
SDC25YLL016W CUS1Q02554 436 aaPredicted RBP2.91□□□□□ -1.94
SDC25YLL016W RAT1Q02792 1006 aaKnown RBP2.91□□□□□ -1.94
SDC25YLL016W YML131WQ03102 365 aa2.91□□□□□ -1.94
SDC25YLL016W PHM6Q05637 104 aa2.91□□□□□ -1.94
SDC25YLL016W RRI2Q12348 645 aa2.91□□□□□ -1.94
SDC25YLL016W RMP1Q12530 201 aa2.91□□□□□ -1.94
SDC25YLL016W CHS3P29465 1165 aa2.91□□□□□ -1.94
SDC25YLL016W HBS1P32769 611 aaKnown RBP2.91□□□□□ -1.94
SDC25YLL016W ENT3P47160 408 aa2.91□□□□□ -1.94
SDC25YLL016W PAP2P53632 584 aaKnown RBP2.91□□□□□ -1.94
SDC25YLL016W YNR063WP53749 607 aa2.91□□□□□ -1.94
SDC25YLL016W SNP1Q00916 300 aaPredicted RBP2.91□□□□□ -1.94
SDC25YLL016W HEH2Q03281 663 aa2.91□□□□□ -1.94
SDC25YLL016W NEW1Q08972 1196 aaKnown RBP2.91□□□□□ -1.94
SDC25YLL016W YPL066WQ12194 479 aa2.91□□□□□ -1.94
SDC25YLL016W SNU66Q12420 587 aaPredicted RBP2.91□□□□□ -1.94
SDC25YLL016W PHO81P17442 1178 aa2.9□□□□□ -1.94
SDC25YLL016W RPC31P17890 251 aa2.9□□□□□ -1.94
SDC25YLL016W KTR4P38131 464 aa2.9□□□□□ -1.94
SDC25YLL016W HOS4P40480 1083 aa2.9□□□□□ -1.94
SDC25YLL016W RPN11P43588 306 aaKnown RBP2.9□□□□□ -1.94
SDC25YLL016W SAP155P43612 1002 aa2.9□□□□□ -1.94
SDC25YLL016W CNN1P43618 361 aa2.9□□□□□ -1.94
SDC25YLL016W PBP1P53297 722 aaKnown RBP2.9□□□□□ -1.94
SDC25YLL016W NOG1Q02892 647 aaKnown RBP2.9□□□□□ -1.94
SDC25YLL016W SPC19Q03954 165 aa2.9□□□□□ -1.94
SDC25YLL016W YTM1Q12024 460 aaPredicted RBP2.9□□□□□ -1.94
SDC25YLL016W SNF2P22082 1703 aa2.9□□□□□ -1.95
SDC25YLL016W RAS1P01119 309 aa2.9□□□□□ -1.95
SDC25YLL016W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
SDC25YLL016W HEM13P11353 328 aaKnown RBP2.9□□□□□ -1.95
SDC25YLL016W MRF1P30775 413 aaPredicted RBP2.9□□□□□ -1.95
SDC25YLL016W IRE1P32361 1115 aa2.9□□□□□ -1.95
SDC25YLL016W APL2P36000 726 aaPredicted RBP2.9□□□□□ -1.95
SDC25YLL016W PET10P36139 283 aa2.9□□□□□ -1.95
SDC25YLL016W CKB2P38930 258 aa2.9□□□□□ -1.95
SDC25YLL016W CLA4P48562 842 aa2.9□□□□□ -1.95
SDC25YLL016W PPT1P53043 513 aa2.9□□□□□ -1.95
SDC25YLL016W BUL2Q03758 920 aaKnown RBP2.9□□□□□ -1.95
SDC25YLL016W SAS4Q04003 481 aa2.9□□□□□ -1.95
SDC25YLL016W DUS3Q06053 668 aaKnown RBP2.9□□□□□ -1.95
SDC25YLL016W SPP382Q06411 708 aaPredicted RBP2.9□□□□□ -1.95
SDC25YLL016W SPT7P35177 1332 aa2.9□□□□□ -1.95
SDC25YLL016W MRT4P33201 236 aaKnown RBP2.9□□□□□ -1.95
SDC25YLL016W YRO2P38079 344 aa2.9□□□□□ -1.95
SDC25YLL016W HSE1P38753 452 aa2.9□□□□□ -1.95
SDC25YLL016W OAF1P39720 1047 aaPredicted RBP2.9□□□□□ -1.95
SDC25YLL016W DOT6P40059 670 aaKnown RBP2.9□□□□□ -1.95
SDC25YLL016W DBP5P20449 482 aaKnown RBP2.89□□□□□ -1.95
SDC25YLL016W PCL2P25693 308 aa2.89□□□□□ -1.95
SDC25YLL016W DAL3P32459 195 aa2.89□□□□□ -1.95
SDC25YLL016W RPS0AP32905 252 aaKnown RBP2.89□□□□□ -1.95
SDC25YLL016W YHL041WP38730 149 aa2.89□□□□□ -1.95
SDC25YLL016W RSC8P43609 557 aaKnown RBP2.89□□□□□ -1.95
SDC25YLL016W YGR153WP48238 217 aa2.89□□□□□ -1.95
SDC25YLL016W MEH1Q02205 184 aa2.89□□□□□ -1.95
SDC25YLL016W VPS30Q02948 557 aa2.89□□□□□ -1.95
SDC25YLL016W RTP1Q12751 981 aa2.89□□□□□ -1.95
SDC25YLL016W RSF2P46974 1380 aa2.89□□□□□ -1.95
SDC25YLL016W TY4B-HP0C2J7 1802 aa2.89□□□□□ -1.95
SDC25YLL016W TY4B-JP47024 1803 aa2.89□□□□□ -1.95
SDC25YLL016W HSC82P15108 705 aaKnown RBP2.89□□□□□ -1.95
SDC25YLL016W SHM1P37292 490 aaPredicted RBP2.89□□□□□ -1.95
SDC25YLL016W VRP1P37370 817 aa2.89□□□□□ -1.95
SDC25YLL016W DUG1P43616 481 aaKnown RBP2.89□□□□□ -1.95
SDC25YLL016W HNT2P49775 206 aa2.89□□□□□ -1.95
SDC25YLL016W REH1Q06709 432 aa2.89□□□□□ -1.95
SDC25YLL016W SSP2Q08646 371 aa2.89□□□□□ -1.95
SDC25YLL016W YOL087CQ99247 1116 aa2.89□□□□□ -1.95
SDC25YLL016W TY3B-IQ7LHG5 1498 aaKnown RBP2.88□□□□□ -1.95
SDC25YLL016W TY4B-PA0A0B7P3V8 1104 aa2.88□□□□□ -1.95
SDC25YLL016W ADE8P04161 214 aa2.88□□□□□ -1.95
SDC25YLL016W YER152CP10356 443 aa2.88□□□□□ -1.95
SDC25YLL016W MLS1P30952 554 aa2.88□□□□□ -1.95
SDC25YLL016W MCM10P32354 571 aa2.88□□□□□ -1.95
SDC25YLL016W YBR238CP38330 731 aaKnown RBP2.88□□□□□ -1.95
SDC25YLL016W RIM11P38615 370 aa2.88□□□□□ -1.95
SDC25YLL016W SSN3P39073 555 aa2.88□□□□□ -1.95
SDC25YLL016W GZF3P42944 551 aaKnown RBP2.88□□□□□ -1.95
SDC25YLL016W SRB7P47822 140 aa2.88□□□□□ -1.95
SDC25YLL016W TY4A-HQ6Q5P6 413 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms