RNA–Protein interactions for RNA: YKL220C

FRE2, Transcript of Ferric reductase and cupric reductase, yeast

Gene FRE2, Length 2,136 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE2	YKL220C	SDH5	Q08230	162 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	NEW1	Q08972	1196 aa	Known RBP	3.11	□□□□□ -1.91
FRE2	YKL220C	YPL277C	Q08989	487 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	RIO1	Q12196	484 aa	Known RBP	3.11	□□□□□ -1.91
FRE2	YKL220C	TAF3	Q12297	353 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	MED1	Q12321	566 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	RPP2B	P02400	110 aa	Known RBP	3.11	□□□□□ -1.91
FRE2	YKL220C	SPO16	P17122	198 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	SSH4	P32343	579 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	PLC1	P32383	869 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	FBP26	P32604	452 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	SET3	P36124	751 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	PEX32	P38292	413 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	YHL050C	P38721	697 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	YHR131C	P38835	850 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	YIL166C	P40445	542 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	IAH1	P41734	238 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	IML2	P47031	731 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	MTO1	P53070	669 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	ADE12	P80210	433 aa	Known RBP	3.11	□□□□□ -1.91
FRE2	YKL220C	UFO1	Q04511	668 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	SGD1	Q06132	899 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	DIB1	Q06819	143 aa	Predicted RBP	3.11	□□□□□ -1.91
FRE2	YKL220C	RSC58	Q07979	502 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	BRX1	Q08235	291 aa	Known RBP	3.11	□□□□□ -1.91
FRE2	YKL220C	LAP2	Q10740	671 aa		3.11	□□□□□ -1.91
FRE2	YKL220C	CDC53	Q12018	815 aa	Known RBP	3.11	□□□□□ -1.91
FRE2	YKL220C	SGS1	P35187	1447 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	HEM1	P09950	548 aa	Predicted RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	DAL1	P32375	460 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	CNS1	P33313	385 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	WHI3	P34761	661 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	PCL7	P40186	285 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	NUP82	P40368	713 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	ALA1	P40825	983 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	MDJ2	P42834	146 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	LSB1	P53281	241 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	MUB1	Q03162	620 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	BUL2	Q03758	920 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	TSR2	Q06672	205 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	REH1	Q06709	432 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	PEX19	Q07418	342 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	SLK19	Q08581	821 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	REX3	Q12090	404 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	GNT1	Q12096	491 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	TMA17	Q12513	150 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	TMA7	Q3E764	64 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	SRM1	P21827	482 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	MCM3	P24279	971 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	TPS2	P31688	896 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	GUT2	P32191	649 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	LYP1	P32487	611 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	BMH2	P34730	273 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	YSW1	P38280	609 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	RIM11	P38615	370 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	DED81	P38707	554 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	ALD5	P40047	520 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	MNT3	P40549	630 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	INA22	P40576	216 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	MMM1	P41800	426 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	SGM1	P47166	707 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	TRF5	P48561	642 aa	Known RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	NUP84	P52891	726 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	SAP4	P53036	818 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	SPC105	P53148	917 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	MNP1	P53163	194 aa	Predicted RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	YGR067C	P53243	804 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	YNL144C	P53907	740 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	PTA1	Q01329	785 aa	Predicted RBP	3.1	□□□□□ -1.91
FRE2	YKL220C	FUS2	Q05670	677 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	MCP2	Q06567	569 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	YIG1	Q08956	461 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	YDR056C	Q12025	205 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	ADF1	Q2V2Q1	113 aa		3.1	□□□□□ -1.91
FRE2	YKL220C	RTC1	Q08281	1341 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	TEF1	P02994	458 aa	Known RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	DSF1	P0CX08	502 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	YNR073C	P0CX09	502 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	PMA2	P19657	947 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	PRP22	P24384	1145 aa	Known RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	GFD2	P25370	566 aa	Known RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	RAD16	P31244	790 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	NTG1	P31378	399 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	SCT1	P32784	759 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	MOT2	P34909	587 aa	Known RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	YKL023W	P36103	277 aa	Known RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	MSR1	P38714	643 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	MTW1	P39731	289 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	DLD3	P39976	496 aa	Known RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	ATG3	P40344	310 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	TMA108	P40462	946 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	FYV10	P40492	516 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	GPD2	P41911	440 aa	Known RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	YRB1	P41920	201 aa	Known RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	EAF7	P53911	425 aa	Known RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	YML131W	Q03102	365 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	SPC19	Q03954	165 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	DON1	Q05610	365 aa		3.09	□□□□□ -1.91
FRE2	YKL220C	NOC3	Q07896	663 aa	Predicted RBP	3.09	□□□□□ -1.91
FRE2	YKL220C	ILS1	P09436	1072 aa	Known RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms