RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W TAH18Q12181 623 aa7.5□□□□□ -1.21
MSP1YGR028W VMA2P16140 517 aaKnown RBP7.49□□□□□ -1.21
MSP1YGR028W PER1P25625 357 aa7.49□□□□□ -1.21
MSP1YGR028W PRO3P32263 286 aaKnown RBP7.49□□□□□ -1.21
MSP1YGR028W EUG1P32474 517 aa7.49□□□□□ -1.21
MSP1YGR028W ECM2P38241 364 aaKnown RBP7.49□□□□□ -1.21
MSP1YGR028W YFL066CP43538 392 aa7.49□□□□□ -1.21
MSP1YGR028W VPS62P53285 467 aa7.49□□□□□ -1.21
MSP1YGR028W BRE5P53741 515 aaKnown RBP7.49□□□□□ -1.21
MSP1YGR028W RAD61Q99359 647 aa7.49□□□□□ -1.21
MSP1YGR028W NAR1P23503 491 aaKnown RBP7.48□□□□□ -1.21
MSP1YGR028W PGM2P37012 569 aaKnown RBP7.48□□□□□ -1.21
MSP1YGR028W MCX1P38323 520 aaPredicted RBP7.48□□□□□ -1.21
MSP1YGR028W BIO5P53744 561 aaKnown RBP7.48□□□□□ -1.21
MSP1YGR028W DUS4Q06063 367 aa7.48□□□□□ -1.21
MSP1YGR028W NKP2Q06162 153 aa7.48□□□□□ -1.21
MSP1YGR028W SKG3Q06315 1026 aa7.48□□□□□ -1.21
MSP1YGR028W YOR131CQ12486 218 aa7.48□□□□□ -1.21
MSP1YGR028W PYC2P32327 1180 aaKnown RBP7.47□□□□□ -1.21
MSP1YGR028W OSH3P38713 996 aaKnown RBP7.47□□□□□ -1.21
MSP1YGR028W VPS8P39702 1274 aa7.47□□□□□ -1.21
MSP1YGR028W SOG2Q08817 791 aa7.47□□□□□ -1.21
MSP1YGR028W CDC16P09798 840 aa7.46□□□□□ -1.22
MSP1YGR028W PRE10P21242 288 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
MSP1YGR028W UTR4P32626 227 aa7.46□□□□□ -1.22
MSP1YGR028W CIC1P38779 376 aaKnown RBP7.46□□□□□ -1.22
MSP1YGR028W SBE2P42223 864 aaKnown RBP7.46□□□□□ -1.22
MSP1YGR028W RPS15Q01855 142 aaKnown RBP7.46□□□□□ -1.22
MSP1YGR028W PUS1Q12211 544 aaKnown RBP7.46□□□□□ -1.22
MSP1YGR028W MRP10O75012 95 aa7.45□□□□□ -1.22
MSP1YGR028W SAM1P10659 382 aaKnown RBP7.45□□□□□ -1.22
MSP1YGR028W RIT1P23796 513 aa7.45□□□□□ -1.22
MSP1YGR028W GCD6P32501 712 aaKnown RBP7.45□□□□□ -1.22
MSP1YGR028W MDJ1P35191 511 aa7.45□□□□□ -1.22
MSP1YGR028W BUL2Q03758 920 aaKnown RBP7.45□□□□□ -1.22
MSP1YGR028W GPI13Q07830 1017 aa7.45□□□□□ -1.22
MSP1YGR028W MET7Q08645 548 aa7.45□□□□□ -1.22
MSP1YGR028W ICL2Q12031 575 aa7.45□□□□□ -1.22
MSP1YGR028W SUT2Q12286 268 aa7.45□□□□□ -1.22
MSP1YGR028W TAO3P40468 2376 aa7.45□□□□□ -1.22
MSP1YGR028W RAD18P10862 487 aa7.44□□□□□ -1.22
MSP1YGR028W OPI1P21957 404 aa7.44□□□□□ -1.22
MSP1YGR028W SRP40P32583 406 aaPredicted RBP7.44□□□□□ -1.22
MSP1YGR028W YHL008CP38750 627 aa7.44□□□□□ -1.22
MSP1YGR028W GPB2P39717 880 aa7.44□□□□□ -1.22
MSP1YGR028W AFG3P39925 761 aa7.44□□□□□ -1.22
MSP1YGR028W SOL4P53315 255 aa7.44□□□□□ -1.22
MSP1YGR028W HDA1P53973 706 aa7.44□□□□□ -1.22
MSP1YGR028W TDA6Q06466 467 aa7.44□□□□□ -1.22
MSP1YGR028W NOC3Q07896 663 aaPredicted RBP7.44□□□□□ -1.22
MSP1YGR028W RIM20Q12033 661 aa7.44□□□□□ -1.22
MSP1YGR028W TUS1Q06412 1307 aa7.44□□□□□ -1.22
MSP1YGR028W FLP1P03870 423 aa7.43□□□□□ -1.22
MSP1YGR028W HEM3P28789 327 aa7.43□□□□□ -1.22
MSP1YGR028W VPS35P34110 944 aa7.43□□□□□ -1.22
MSP1YGR028W SHP1P34223 423 aa7.43□□□□□ -1.22
MSP1YGR028W UIP5P36137 443 aa7.43□□□□□ -1.22
MSP1YGR028W MXR1P40029 184 aa7.43□□□□□ -1.22
MSP1YGR028W GIP2P40036 548 aa7.43□□□□□ -1.22
MSP1YGR028W YJR107WP47145 328 aa7.43□□□□□ -1.22
MSP1YGR028W ALD6P54115 500 aaKnown RBP7.43□□□□□ -1.22
MSP1YGR028W CTR9P89105 1077 aa7.43□□□□□ -1.22
MSP1YGR028W MSH6Q03834 1242 aa7.43□□□□□ -1.22
MSP1YGR028W GLO4Q12320 285 aa7.43□□□□□ -1.22
MSP1YGR028W ANP1P32629 500 aa7.42□□□□□ -1.22
MSP1YGR028W BCS1P32839 456 aa7.42□□□□□ -1.22
MSP1YGR028W PHO88P38264 188 aaPredicted RBP7.42□□□□□ -1.22
MSP1YGR028W SOK2P53438 785 aaPredicted RBP7.42□□□□□ -1.22
MSP1YGR028W FOL1P53848 824 aa7.42□□□□□ -1.22
MSP1YGR028W VPS30Q02948 557 aa7.42□□□□□ -1.22
MSP1YGR028W SLD5Q03406 294 aa7.42□□□□□ -1.22
MSP1YGR028W TMA64Q04600 565 aaKnown RBP7.42□□□□□ -1.22
MSP1YGR028W SUE1Q06524 206 aa7.42□□□□□ -1.22
MSP1YGR028W YPR053CQ6Q5F3 151 aa7.42□□□□□ -1.22
MSP1YGR028W TY4B-PA0A0B7P3V8 1104 aa7.41□□□□□ -1.22
MSP1YGR028W VAS1P07806 1104 aaKnown RBP7.41□□□□□ -1.22
MSP1YGR028W RGT1P32862 1170 aa7.41□□□□□ -1.22
MSP1YGR028W MYO3P36006 1272 aa7.41□□□□□ -1.22
MSP1YGR028W YKR018CP36114 725 aa7.41□□□□□ -1.22
MSP1YGR028W YMR187CQ03236 431 aa7.41□□□□□ -1.22
MSP1YGR028W MDM20Q12387 796 aaKnown RBP7.41□□□□□ -1.22
MSP1YGR028W RKM4Q12504 494 aa7.41□□□□□ -1.22
MSP1YGR028W TY4A-HQ6Q5P6 413 aa7.41□□□□□ -1.22
MSP1YGR028W PHO4P07270 312 aaKnown RBP7.4□□□□□ -1.22
MSP1YGR028W TGL1P34163 548 aa7.4□□□□□ -1.22
MSP1YGR028W AMN1P38285 549 aaPredicted RBP7.4□□□□□ -1.22
MSP1YGR028W NDT80P38830 627 aa7.4□□□□□ -1.22
MSP1YGR028W VPS45P38932 577 aa7.4□□□□□ -1.22
MSP1YGR028W YJR124CP47159 448 aa7.4□□□□□ -1.22
MSP1YGR028W YGL039WP53183 348 aaKnown RBP7.4□□□□□ -1.22
MSP1YGR028W YGR125WP53273 1036 aa7.4□□□□□ -1.22
MSP1YGR028W YAF9P53930 226 aa7.4□□□□□ -1.22
MSP1YGR028W DUS3Q06053 668 aaKnown RBP7.4□□□□□ -1.22
MSP1YGR028W FPR4Q06205 392 aaPredicted RBP7.4□□□□□ -1.22
MSP1YGR028W PGA3Q12746 312 aaKnown RBP7.4□□□□□ -1.22
MSP1YGR028W NUC1P08466 329 aa7.39□□□□□ -1.23
MSP1YGR028W SAC7P17121 654 aa7.39□□□□□ -1.23
MSP1YGR028W RPL8BP29453 256 aaKnown RBP7.39□□□□□ -1.23
MSP1YGR028W IMP2'P32351 346 aa7.39□□□□□ -1.23
MSP1YGR028W MET4P32389 672 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms