RNA–Protein interactions for RNA: YER135C

YER135C, Transcript of Dubious open reading frame, yeast

Gene YER135C, Length 393 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YER135C	YER135C	CWC24	P53769	259 aa		4.14	□□□□□ -1.75
YER135C	YER135C	GIS1	Q03833	894 aa		4.14	□□□□□ -1.75
YER135C	YER135C	KCS1	Q12494	1050 aa		4.14	□□□□□ -1.75
YER135C	YER135C	PFK1	P16861	987 aa	Known RBP	4.13	□□□□□ -1.75
YER135C	YER135C	CDC12	P32468	407 aa	Known RBP	4.13	□□□□□ -1.75
YER135C	YER135C	ATG19	P35193	415 aa		4.13	□□□□□ -1.75
YER135C	YER135C	MSS4	P38994	779 aa		4.13	□□□□□ -1.75
YER135C	YER135C	MBP1	P39678	833 aa		4.13	□□□□□ -1.75
YER135C	YER135C	SLI1	P53304	468 aa		4.13	□□□□□ -1.75
YER135C	YER135C	CTF4	Q01454	927 aa		4.13	□□□□□ -1.75
YER135C	YER135C	KIN4	Q01919	800 aa		4.13	□□□□□ -1.75
YER135C	YER135C	PIN2	Q12057	282 aa		4.13	□□□□□ -1.75
YER135C	YER135C	RPC82	P32349	654 aa		4.12	□□□□□ -1.75
YER135C	YER135C	VPS16	Q03308	798 aa		4.12	□□□□□ -1.75
YER135C	YER135C	SVF1	Q05515	481 aa		4.12	□□□□□ -1.75
YER135C	YER135C	DUS3	Q06053	668 aa	Known RBP	4.12	□□□□□ -1.75
YER135C	YER135C	AIM39	Q08223	395 aa		4.12	□□□□□ -1.75
YER135C	YER135C	NPC2	Q12408	173 aa		4.12	□□□□□ -1.75
YER135C	YER135C	TAD3	Q9URQ3	322 aa		4.12	□□□□□ -1.75
YER135C	YER135C	CHS7	P38843	316 aa		4.11	□□□□□ -1.75
YER135C	YER135C	NPP2	P39997	493 aa		4.11	□□□□□ -1.75
YER135C	YER135C	URM1	P40554	99 aa	Predicted RBP	4.11	□□□□□ -1.75
YER135C	YER135C	NCS6	P53088	359 aa		4.11	□□□□□ -1.75
YER135C	YER135C	SFB2	P53953	876 aa		4.11	□□□□□ -1.75
YER135C	YER135C	YPR196W	Q06595	470 aa		4.11	□□□□□ -1.75
YER135C	YER135C	HRR25	P29295	494 aa	Known RBP	4.1	□□□□□ -1.75
YER135C	YER135C	VBA5	P36172	582 aa		4.1	□□□□□ -1.75
YER135C	YER135C	GYP7	P48365	746 aa		4.1	□□□□□ -1.75
YER135C	YER135C	SHE9	Q04172	456 aa		4.1	□□□□□ -1.75
YER135C	YER135C	JIP5	Q06214	492 aa	Predicted RBP	4.1	□□□□□ -1.75
YER135C	YER135C	ENB1	Q08299	606 aa		4.1	□□□□□ -1.75
YER135C	YER135C	YER158C	P40095	573 aa		4.09	□□□□□ -1.75
YER135C	YER135C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YER135C	YER135C	OPI10	Q08202	246 aa		4.09	□□□□□ -1.75
YER135C	YER135C	PRI2	P20457	528 aa		4.08	□□□□□ -1.76
YER135C	YER135C	YKR078W	P36158	585 aa	Known RBP	4.08	□□□□□ -1.76
YER135C	YER135C	YDR306C	Q06640	478 aa		4.08	□□□□□ -1.76
YER135C	YER135C	WHI4	Q07655	649 aa	Known RBP	4.08	□□□□□ -1.76
YER135C	YER135C	GUP2	Q08929	609 aa		4.08	□□□□□ -1.76
YER135C	YER135C	RAD53	P22216	821 aa		4.07	□□□□□ -1.76
YER135C	YER135C	KAR4	P25583	335 aa		4.07	□□□□□ -1.76
YER135C	YER135C	PPH3	P32345	308 aa		4.07	□□□□□ -1.76
YER135C	YER135C	MRP8	P35719	219 aa		4.07	□□□□□ -1.76
YER135C	YER135C	RAI1	P53063	387 aa	Known RBP	4.07	□□□□□ -1.76
YER135C	YER135C	CAD1	P24813	409 aa	Known RBP	4.06	□□□□□ -1.76
YER135C	YER135C	CDC48	P25694	835 aa	Known RBP	4.06	□□□□□ -1.76
YER135C	YER135C	EFT1	P32324	842 aa	Known RBP	4.06	□□□□□ -1.76
YER135C	YER135C	YKL069W	P36088	180 aa		4.06	□□□□□ -1.76
YER135C	YER135C	TSL1	P38427	1098 aa	Known RBP	4.06	□□□□□ -1.76
YER135C	YER135C	UPC2	Q12151	913 aa		4.06	□□□□□ -1.76
YER135C	YER135C	LAS17	Q12446	633 aa		4.06	□□□□□ -1.76
YER135C	YER135C	ADE8	P04161	214 aa		4.05	□□□□□ -1.76
YER135C	YER135C	SED4	P25365	1065 aa		4.05	□□□□□ -1.76
YER135C	YER135C	PBY1	P38254	753 aa		4.05	□□□□□ -1.76
YER135C	YER135C	TPO2	P53283	614 aa		4.05	□□□□□ -1.76
YER135C	YER135C	NOT3	P06102	836 aa	Known RBP	4.04	□□□□□ -1.76
YER135C	YER135C	AAR2	P32357	355 aa	Predicted RBP	4.04	□□□□□ -1.76
YER135C	YER135C	OAR1	P35731	278 aa		4.04	□□□□□ -1.76
YER135C	YER135C	YBR238C	P38330	731 aa	Known RBP	4.04	□□□□□ -1.76
YER135C	YER135C	VAC8	P39968	578 aa		4.04	□□□□□ -1.76
YER135C	YER135C	VPS30	Q02948	557 aa		4.04	□□□□□ -1.76
YER135C	YER135C	NPP1	P25353	742 aa		4.03	□□□□□ -1.76
YER135C	YER135C	STE14	P32584	239 aa		4.03	□□□□□ -1.76
YER135C	YER135C	YRO2	P38079	344 aa		4.03	□□□□□ -1.76
YER135C	YER135C	YKE2	P52553	114 aa		4.03	□□□□□ -1.76
YER135C	YER135C	PPM2	Q08282	695 aa		4.03	□□□□□ -1.76
YER135C	YER135C	KTR4	P38131	464 aa		4.02	□□□□□ -1.77
YER135C	YER135C	MOH1	P38191	138 aa		4.02	□□□□□ -1.77
YER135C	YER135C	SUL1	P38359	859 aa		4.02	□□□□□ -1.77
YER135C	YER135C	SIT1	P39980	628 aa		4.02	□□□□□ -1.77
YER135C	YER135C	IRR1	P40541	1150 aa		4.02	□□□□□ -1.77
YER135C	YER135C	BUL1	P48524	976 aa		4.02	□□□□□ -1.77
YER135C	YER135C	UBA2	P52488	636 aa		4.02	□□□□□ -1.77
YER135C	YER135C	YLR040C	Q07988	224 aa		4.02	□□□□□ -1.77
YER135C	YER135C	YOL073C	Q08232	322 aa		4.02	□□□□□ -1.77
YER135C	YER135C	TRP4	P07285	380 aa	Predicted RBP	4.01	□□□□□ -1.77
YER135C	YER135C	PRP9	P19736	530 aa	Known RBP	4.01	□□□□□ -1.77
YER135C	YER135C	AFR1	P33304	620 aa		4.01	□□□□□ -1.77
YER135C	YER135C	STE13	P33894	931 aa		4.01	□□□□□ -1.77
YER135C	YER135C	SNU71	P53207	620 aa	Known RBP	4.01	□□□□□ -1.77
YER135C	YER135C	ALD6	P54115	500 aa	Known RBP	4.01	□□□□□ -1.77
YER135C	YER135C	TDA5	Q06417	326 aa	Known RBP	4.01	□□□□□ -1.77
YER135C	YER135C	RFA1	P22336	621 aa	Known RBP	4	□□□□□ -1.77
YER135C	YER135C	ERG4	P25340	473 aa		4	□□□□□ -1.77
YER135C	YER135C	SCT1	P32784	759 aa		4	□□□□□ -1.77
YER135C	YER135C	SPF1	P39986	1215 aa	Known RBP	4	□□□□□ -1.77
YER135C	YER135C	CCM1	P48237	864 aa	Predicted RBP	4	□□□□□ -1.77
YER135C	YER135C	SSL1	Q04673	461 aa	Predicted RBP	4	□□□□□ -1.77
YER135C	YER135C	STE5	P32917	917 aa		3.99	□□□□□ -1.77
YER135C	YER135C	FBP1	P09201	348 aa		3.98	□□□□□ -1.77
YER135C	YER135C	RPD3	P32561	433 aa		3.98	□□□□□ -1.77
YER135C	YER135C	YBR184W	P38299	523 aa		3.98	□□□□□ -1.77
YER135C	YER135C	SDP1	P40479	209 aa		3.98	□□□□□ -1.77
YER135C	YER135C	RNT1	Q02555	471 aa		3.98	□□□□□ -1.77
YER135C	YER135C	SLU7	Q02775	382 aa	Known RBP	3.98	□□□□□ -1.77
YER135C	YER135C	LCD1	Q04377	747 aa		3.98	□□□□□ -1.77
YER135C	YER135C	OMS1	Q06668	471 aa		3.98	□□□□□ -1.77
YER135C	YER135C	PEX19	Q07418	342 aa		3.98	□□□□□ -1.77
YER135C	YER135C	SEC21	P32074	935 aa	Known RBP	3.97	□□□□□ -1.77
YER135C	YER135C	HBS1	P32769	611 aa	Known RBP	3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms