RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W MSS4P38994 779 aa5.31□□□□□ -1.56
PRE1YER012W KCS1Q12494 1050 aa5.31□□□□□ -1.56
PRE1YER012W DCG1P32460 244 aa5.3□□□□□ -1.56
PRE1YER012W VBA5P36172 582 aa5.3□□□□□ -1.56
PRE1YER012W CHA4P43634 648 aa5.3□□□□□ -1.56
PRE1YER012W PMI40P29952 429 aaKnown RBP5.29□□□□□ -1.56
PRE1YER012W FUN30P31380 1131 aa5.29□□□□□ -1.56
PRE1YER012W CDC12P32468 407 aaKnown RBP5.29□□□□□ -1.56
PRE1YER012W CCC2P38995 1004 aa5.29□□□□□ -1.56
PRE1YER012W OPI10Q08202 246 aa5.29□□□□□ -1.56
PRE1YER012W PIN2Q12057 282 aa5.29□□□□□ -1.56
PRE1YER012W YLL058WQ12198 575 aa5.29□□□□□ -1.56
PRE1YER012W CLN2P20438 545 aa5.28□□□□□ -1.56
PRE1YER012W AGP1P25376 633 aa5.28□□□□□ -1.56
PRE1YER012W SBA1P28707 216 aaKnown RBP5.28□□□□□ -1.56
PRE1YER012W YPR196WQ06595 470 aa5.28□□□□□ -1.56
PRE1YER012W NPC2Q12408 173 aa5.28□□□□□ -1.56
PRE1YER012W HSL1P34244 1518 aa5.28□□□□□ -1.56
PRE1YER012W HSF1P10961 833 aa5.27□□□□□ -1.57
PRE1YER012W DEF1P35732 738 aaKnown RBP5.27□□□□□ -1.57
PRE1YER012W EXG2P52911 562 aa5.27□□□□□ -1.57
PRE1YER012W SRP1Q02821 542 aaKnown RBP5.27□□□□□ -1.57
PRE1YER012W YDR306CQ06640 478 aa5.27□□□□□ -1.57
PRE1YER012W LAS17Q12446 633 aa5.27□□□□□ -1.57
PRE1YER012W PFK1P16861 987 aaKnown RBP5.26□□□□□ -1.57
PRE1YER012W ERT1P38140 529 aa5.26□□□□□ -1.57
PRE1YER012W SNF7P39929 240 aaKnown RBP5.26□□□□□ -1.57
PRE1YER012W VAC8P39968 578 aa5.26□□□□□ -1.57
PRE1YER012W PSP2P50109 593 aaKnown RBP5.26□□□□□ -1.57
PRE1YER012W NPP1P25353 742 aa5.25□□□□□ -1.57
PRE1YER012W HRR25P29295 494 aaKnown RBP5.25□□□□□ -1.57
PRE1YER012W CHS7P38843 316 aa5.25□□□□□ -1.57
PRE1YER012W ALD6P54115 500 aaKnown RBP5.25□□□□□ -1.57
PRE1YER012W PPH3P32345 308 aa5.24□□□□□ -1.57
PRE1YER012W YER158CP40095 573 aa5.24□□□□□ -1.57
PRE1YER012W NCS6P53088 359 aa5.24□□□□□ -1.57
PRE1YER012W CAD1P24813 409 aaKnown RBP5.23□□□□□ -1.57
PRE1YER012W KAR4P25583 335 aa5.23□□□□□ -1.57
PRE1YER012W TSL1P38427 1098 aaKnown RBP5.23□□□□□ -1.57
PRE1YER012W GUS1P46655 708 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
PRE1YER012W SPT6P23615 1451 aaKnown RBP5.23□□□□□ -1.57
PRE1YER012W AFR1P33304 620 aa5.22□□□□□ -1.57
PRE1YER012W AIM39Q08223 395 aa5.22□□□□□ -1.57
PRE1YER012W AAR2P32357 355 aaPredicted RBP5.21□□□□□ -1.58
PRE1YER012W STE5P32917 917 aa5.21□□□□□ -1.58
PRE1YER012W URM1P40554 99 aaPredicted RBP5.21□□□□□ -1.58
PRE1YER012W GYP7P48365 746 aa5.21□□□□□ -1.58
PRE1YER012W CTF4Q01454 927 aa5.21□□□□□ -1.58
PRE1YER012W SHE9Q04172 456 aa5.21□□□□□ -1.58
PRE1YER012W SSL1Q04673 461 aaPredicted RBP5.21□□□□□ -1.58
PRE1YER012W UPC2Q12151 913 aa5.21□□□□□ -1.58
PRE1YER012W NOT3P06102 836 aaKnown RBP5.2□□□□□ -1.58
PRE1YER012W RPD3P32561 433 aa5.2□□□□□ -1.58
PRE1YER012W YRO2P38079 344 aa5.2□□□□□ -1.58
PRE1YER012W IOC3P43596 787 aa5.2□□□□□ -1.58
PRE1YER012W RAI1P53063 387 aaKnown RBP5.2□□□□□ -1.58
PRE1YER012W BUL1P48524 976 aa5.19□□□□□ -1.58
PRE1YER012W TAD3Q9URQ3 322 aa5.19□□□□□ -1.58
PRE1YER012W RPP2AP05319 106 aaKnown RBP5.18□□□□□ -1.58
PRE1YER012W CDC48P25694 835 aaKnown RBP5.18□□□□□ -1.58
PRE1YER012W YBR184WP38299 523 aa5.18□□□□□ -1.58
PRE1YER012W KRI1P42846 591 aaKnown RBP5.18□□□□□ -1.58
PRE1YER012W TDA5Q06417 326 aaKnown RBP5.18□□□□□ -1.58
PRE1YER012W YLR040CQ07988 224 aa5.18□□□□□ -1.58
PRE1YER012W RAD53P22216 821 aa5.17□□□□□ -1.58
PRE1YER012W SED4P25365 1065 aa5.17□□□□□ -1.58
PRE1YER012W SPF1P39986 1215 aaKnown RBP5.17□□□□□ -1.58
PRE1YER012W YMR206WQ03695 313 aa5.17□□□□□ -1.58
PRE1YER012W HIR3P47171 1648 aa5.16□□□□□ -1.58
PRE1YER012W STE14P32584 239 aa5.16□□□□□ -1.58
PRE1YER012W ATG19P35193 415 aa5.16□□□□□ -1.58
PRE1YER012W MRP8P35719 219 aa5.16□□□□□ -1.58
PRE1YER012W YBR284WP38150 797 aa5.16□□□□□ -1.58
PRE1YER012W SUL1P38359 859 aa5.16□□□□□ -1.58
PRE1YER012W SLU7Q02775 382 aaKnown RBP5.16□□□□□ -1.58
PRE1YER012W TRM13Q12383 476 aa5.16□□□□□ -1.58
PRE1YER012W ADE8P04161 214 aa5.15□□□□□ -1.59
PRE1YER012W NAP1P25293 417 aaKnown RBP5.15□□□□□ -1.59
PRE1YER012W EFT1P32324 842 aaKnown RBP5.15□□□□□ -1.59
PRE1YER012W HBS1P32769 611 aaKnown RBP5.15□□□□□ -1.59
PRE1YER012W PBY1P38254 753 aa5.15□□□□□ -1.59
PRE1YER012W GIS1Q03833 894 aa5.15□□□□□ -1.59
PRE1YER012W SVF1Q05515 481 aa5.15□□□□□ -1.59
PRE1YER012W ENB1Q08299 606 aa5.15□□□□□ -1.59
PRE1YER012W RPC82P32349 654 aa5.14□□□□□ -1.59
PRE1YER012W STE13P33894 931 aa5.14□□□□□ -1.59
PRE1YER012W YKR078WP36158 585 aaKnown RBP5.14□□□□□ -1.59
PRE1YER012W TOK1P40310 691 aa5.14□□□□□ -1.59
PRE1YER012W IRR1P40541 1150 aa5.14□□□□□ -1.59
PRE1YER012W YKE2P52553 114 aa5.14□□□□□ -1.59
PRE1YER012W YOL073CQ08232 322 aa5.14□□□□□ -1.59
PRE1YER012W PPM2Q08282 695 aa5.14□□□□□ -1.59
PRE1YER012W MOH1P38191 138 aa5.13□□□□□ -1.59
PRE1YER012W YIL108WP40483 696 aaKnown RBP5.13□□□□□ -1.59
PRE1YER012W CEP3P40969 608 aa5.13□□□□□ -1.59
PRE1YER012W YPR071WQ12346 211 aa5.13□□□□□ -1.59
PRE1YER012W ECM5Q03214 1411 aa5.13□□□□□ -1.59
PRE1YER012W SEC21P32074 935 aaKnown RBP5.12□□□□□ -1.59
PRE1YER012W ALR2P43553 858 aa5.12□□□□□ -1.59
PRE1YER012W PFD1P46988 109 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms