RNA–Protein interactions for RNA: YER009W

NTF2, Transcript of Nuclear envelope protein, yeast

Gene NTF2, Length 378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTF2	YER009W	YKR078W	P36158	585 aa	Known RBP	4.27	□□□□□ -1.73
NTF2	YER009W	ERT1	P38140	529 aa		4.27	□□□□□ -1.73
NTF2	YER009W	TSL1	P38427	1098 aa	Known RBP	4.27	□□□□□ -1.73
NTF2	YER009W	YAP1801	P38856	637 aa		4.27	□□□□□ -1.73
NTF2	YER009W	NUP82	P40368	713 aa		4.27	□□□□□ -1.73
NTF2	YER009W	ECL1	P48235	211 aa		4.27	□□□□□ -1.73
NTF2	YER009W	SFB2	P53953	876 aa		4.27	□□□□□ -1.73
NTF2	YER009W	MSC2	Q03455	724 aa		4.27	□□□□□ -1.73
NTF2	YER009W	SIZ1	Q04195	904 aa		4.27	□□□□□ -1.73
NTF2	YER009W	CYC1	P00044	109 aa	Predicted RBP	4.26	□□□□□ -1.73
NTF2	YER009W	TOM70	P07213	617 aa	Known RBP	4.26	□□□□□ -1.73
NTF2	YER009W	ECM21	P38167	1117 aa	Known RBP	4.26	□□□□□ -1.73
NTF2	YER009W	YER158C	P40095	573 aa		4.26	□□□□□ -1.73
NTF2	YER009W	TOK1	P40310	691 aa		4.26	□□□□□ -1.73
NTF2	YER009W	UBP6	P43593	499 aa	Known RBP	4.26	□□□□□ -1.73
NTF2	YER009W	CCM1	P48237	864 aa	Predicted RBP	4.26	□□□□□ -1.73
NTF2	YER009W	RNH70	P53331	553 aa		4.26	□□□□□ -1.73
NTF2	YER009W	SNO2	P53823	222 aa		4.26	□□□□□ -1.73
NTF2	YER009W	YPR196W	Q06595	470 aa		4.26	□□□□□ -1.73
NTF2	YER009W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
NTF2	YER009W	GAL10	P04397	699 aa		4.25	□□□□□ -1.73
NTF2	YER009W	PHO8	P11491	566 aa		4.25	□□□□□ -1.73
NTF2	YER009W	SRM1	P21827	482 aa		4.25	□□□□□ -1.73
NTF2	YER009W	CDC48	P25694	835 aa	Known RBP	4.25	□□□□□ -1.73
NTF2	YER009W	REC104	P33323	182 aa		4.25	□□□□□ -1.73
NTF2	YER009W	MRPL22	P53881	309 aa		4.25	□□□□□ -1.73
NTF2	YER009W	YOR352W	Q08816	343 aa		4.25	□□□□□ -1.73
NTF2	YER009W	YLR125W	Q12138	136 aa		4.25	□□□□□ -1.73
NTF2	YER009W	AIM44	Q99299	758 aa		4.25	□□□□□ -1.73
NTF2	YER009W	RPC82	P32349	654 aa		4.24	□□□□□ -1.73
NTF2	YER009W	PPG1	P32838	368 aa		4.24	□□□□□ -1.73
NTF2	YER009W	SEG2	P34250	1132 aa		4.24	□□□□□ -1.73
NTF2	YER009W	YBR238C	P38330	731 aa	Known RBP	4.24	□□□□□ -1.73
NTF2	YER009W	YKE2	P52553	114 aa		4.24	□□□□□ -1.73
NTF2	YER009W	SGD1	Q06132	899 aa		4.24	□□□□□ -1.73
NTF2	YER009W	NMD2	P38798	1089 aa	Known RBP	4.23	□□□□□ -1.73
NTF2	YER009W	ZRG8	P40021	1076 aa		4.23	□□□□□ -1.73
NTF2	YER009W	PLB2	Q03674	706 aa		4.23	□□□□□ -1.73
NTF2	YER009W	ROT1	Q03691	256 aa		4.23	□□□□□ -1.73
NTF2	YER009W	ENA1	P13587	1091 aa		4.22	□□□□□ -1.73
NTF2	YER009W	THI4	P32318	326 aa		4.22	□□□□□ -1.73
NTF2	YER009W	SRP101	P32916	621 aa		4.22	□□□□□ -1.73
NTF2	YER009W	RRP14	P36080	434 aa	Known RBP	4.22	□□□□□ -1.73
NTF2	YER009W	LAM1	P38851	1228 aa		4.22	□□□□□ -1.73
NTF2	YER009W	GDH3	P39708	457 aa		4.22	□□□□□ -1.73
NTF2	YER009W	HSV2	P50079	448 aa	Predicted RBP	4.22	□□□□□ -1.73
NTF2	YER009W	YGR012W	P53206	393 aa		4.22	□□□□□ -1.73
NTF2	YER009W	ALG12	P53730	551 aa		4.22	□□□□□ -1.73
NTF2	YER009W	ENA2	Q01896	1091 aa		4.22	□□□□□ -1.73
NTF2	YER009W	ENA5	Q12691	1091 aa		4.22	□□□□□ -1.73
NTF2	YER009W	MET6	P05694	767 aa	Known RBP	4.21	□□□□□ -1.74
NTF2	YER009W	HSF1	P10961	833 aa		4.21	□□□□□ -1.74
NTF2	YER009W	GAS1	P22146	559 aa	Known RBP	4.21	□□□□□ -1.74
NTF2	YER009W	TSA1	P34760	196 aa	Known RBP	4.21	□□□□□ -1.74
NTF2	YER009W	MEF2	P39677	819 aa		4.21	□□□□□ -1.74
NTF2	YER009W	MND2	P40577	368 aa		4.21	□□□□□ -1.74
NTF2	YER009W	ALG2	P43636	503 aa		4.21	□□□□□ -1.74
NTF2	YER009W	CDA1	Q06702	301 aa		4.21	□□□□□ -1.74
NTF2	YER009W	ENV7	Q12003	364 aa		4.21	□□□□□ -1.74
NTF2	YER009W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
NTF2	YER009W	NOT3	P06102	836 aa	Known RBP	4.2	□□□□□ -1.74
NTF2	YER009W	NIT3	P49954	291 aa		4.2	□□□□□ -1.74
NTF2	YER009W	MAL11	P53048	616 aa		4.2	□□□□□ -1.74
NTF2	YER009W	GTF1	P53260	183 aa	Predicted RBP	4.2	□□□□□ -1.74
NTF2	YER009W	PBP1	P53297	722 aa	Known RBP	4.2	□□□□□ -1.74
NTF2	YER009W	POB3	Q04636	552 aa	Known RBP	4.2	□□□□□ -1.74
NTF2	YER009W	CDA2	Q06703	312 aa		4.2	□□□□□ -1.74
NTF2	YER009W	MPH2	P0CD99	609 aa		4.19	□□□□□ -1.74
NTF2	YER009W	RAD53	P22216	821 aa		4.19	□□□□□ -1.74
NTF2	YER009W	RFA1	P22336	621 aa	Known RBP	4.19	□□□□□ -1.74
NTF2	YER009W	MSH2	P25847	964 aa		4.19	□□□□□ -1.74
NTF2	YER009W	EMC3	P36039	253 aa		4.19	□□□□□ -1.74
NTF2	YER009W	AIM3	P38266	947 aa	Known RBP	4.19	□□□□□ -1.74
NTF2	YER009W	GYP8	P43570	497 aa		4.19	□□□□□ -1.74
NTF2	YER009W	AVT1	P47082	602 aa		4.19	□□□□□ -1.74
NTF2	YER009W	RAI1	P53063	387 aa	Known RBP	4.19	□□□□□ -1.74
NTF2	YER009W	PRP43	P53131	767 aa	Known RBP	4.19	□□□□□ -1.74
NTF2	YER009W	YGR283C	P53336	341 aa	Predicted RBP	4.19	□□□□□ -1.74
NTF2	YER009W	YDR132C	Q03900	495 aa		4.19	□□□□□ -1.74
NTF2	YER009W	TPO1	Q07824	586 aa		4.19	□□□□□ -1.74
NTF2	YER009W	RPS13	P05756	151 aa	Known RBP	4.18	□□□□□ -1.74
NTF2	YER009W	SPE1	P08432	466 aa		4.18	□□□□□ -1.74
NTF2	YER009W	RNQ1	P25367	405 aa		4.18	□□□□□ -1.74
NTF2	YER009W	SPC29	P33419	253 aa		4.18	□□□□□ -1.74
NTF2	YER009W	POA1	P38218	177 aa		4.18	□□□□□ -1.74
NTF2	YER009W	NIT1	P40447	199 aa		4.18	□□□□□ -1.74
NTF2	YER009W	GCV2	P49095	1034 aa		4.18	□□□□□ -1.74
NTF2	YER009W	PSP2	P50109	593 aa	Known RBP	4.18	□□□□□ -1.74
NTF2	YER009W	DAM1	P53267	343 aa		4.18	□□□□□ -1.74
NTF2	YER009W	VPS30	Q02948	557 aa		4.18	□□□□□ -1.74
NTF2	YER009W	GCN5	Q03330	439 aa		4.18	□□□□□ -1.74
NTF2	YER009W	DUS4	Q06063	367 aa		4.18	□□□□□ -1.74
NTF2	YER009W	GPB1	Q08886	897 aa		4.18	□□□□□ -1.74
NTF2	YER009W	YPL277C	Q08989	487 aa		4.18	□□□□□ -1.74
NTF2	YER009W	SOD2	P00447	233 aa		4.17	□□□□□ -1.74
NTF2	YER009W	URA1	P28272	314 aa	Predicted RBP	4.17	□□□□□ -1.74
NTF2	YER009W	ELM1	P32801	640 aa		4.17	□□□□□ -1.74
NTF2	YER009W	STE13	P33894	931 aa		4.17	□□□□□ -1.74
NTF2	YER009W	SPT20	P50875	604 aa		4.17	□□□□□ -1.74
NTF2	YER009W	RXT3	Q07458	294 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms