RNA–Protein interactions for RNA: YDR420W

HKR1, Transcript of Mucin family member that functions as an osmosensor in the HOG pathway, yeastyeast

Gene HKR1, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HKR1YDR420W SNZ3P43545 298 aa1.5□□□□□ -2.17
HKR1YDR420W NCS6P53088 359 aa1.5□□□□□ -2.17
HKR1YDR420W RET3P53600 189 aa1.5□□□□□ -2.17
HKR1YDR420W SNZ2P53824 298 aa1.5□□□□□ -2.17
HKR1YDR420W UBP2Q01476 1272 aa1.5□□□□□ -2.17
HKR1YDR420W UTP13Q05946 817 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W ESF1Q06344 628 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W SWA2Q06677 668 aa1.5□□□□□ -2.17
HKR1YDR420W PUT4P15380 627 aa1.49□□□□□ -2.17
HKR1YDR420W PRP4P20053 465 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W MRPL8P22353 238 aa1.49□□□□□ -2.17
HKR1YDR420W CLB1P24868 471 aa1.49□□□□□ -2.17
HKR1YDR420W TCA17P32613 152 aa1.49□□□□□ -2.17
HKR1YDR420W SEG2P34250 1132 aa1.49□□□□□ -2.17
HKR1YDR420W APE4P38821 490 aa1.49□□□□□ -2.17
HKR1YDR420W UBP7P40453 1071 aa1.49□□□□□ -2.17
HKR1YDR420W ARF3P40994 183 aaRIP-Chip data1.49□□□□□ -2.17 RIP-Chip
HKR1YDR420W SUM1P46676 1062 aa1.49□□□□□ -2.17
HKR1YDR420W TAF4P50105 388 aa1.49□□□□□ -2.17
HKR1YDR420W HOP2P53187 214 aa1.49□□□□□ -2.17
HKR1YDR420W DBP6P53734 629 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W INA17Q02888 182 aa1.49□□□□□ -2.17
HKR1YDR420W SPR28Q04921 423 aa1.49□□□□□ -2.17
HKR1YDR420W CDC53Q12018 815 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W VPS5Q92331 675 aa1.49□□□□□ -2.17
HKR1YDR420W PDR12Q02785 1511 aa1.49□□□□□ -2.17
HKR1YDR420W GPA1P08539 472 aa1.49□□□□□ -2.17
HKR1YDR420W NMT1P14743 455 aa1.49□□□□□ -2.17
HKR1YDR420W PMA2P19657 947 aa1.49□□□□□ -2.17
HKR1YDR420W HNM1P19807 563 aa1.49□□□□□ -2.17
HKR1YDR420W MGM1P32266 881 aa1.49□□□□□ -2.17
HKR1YDR420W CNS1P33313 385 aa1.49□□□□□ -2.17
HKR1YDR420W YBL036CP38197 257 aa1.49□□□□□ -2.17
HKR1YDR420W OLA1P38219 394 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W PPX1P38698 397 aa1.49□□□□□ -2.17
HKR1YDR420W YHR131CP38835 850 aa1.49□□□□□ -2.17
HKR1YDR420W YJR061WP40355 935 aa1.49□□□□□ -2.17
HKR1YDR420W YGL140CP53120 1219 aa1.49□□□□□ -2.17
HKR1YDR420W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
HKR1YDR420W FRK1Q03002 865 aaPredicted RBP1.49□□□□□ -2.17
HKR1YDR420W SYF1Q04048 859 aaPredicted RBP1.49□□□□□ -2.17
HKR1YDR420W DBP9Q06218 594 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W VPS74Q06385 345 aa1.49□□□□□ -2.17
HKR1YDR420W ARO10Q06408 635 aa1.49□□□□□ -2.17
HKR1YDR420W LAP2Q10740 671 aa1.49□□□□□ -2.17
HKR1YDR420W IOC2Q12072 812 aa1.49□□□□□ -2.17
HKR1YDR420W TRS33Q99394 268 aa1.49□□□□□ -2.17
HKR1YDR420W NUP188P52593 1655 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W HAP1P0CE41 1502 aa1.49□□□□□ -2.17
HKR1YDR420W YRF1-4O13559 1382 aa1.49□□□□□ -2.17
HKR1YDR420W TEF1P02994 458 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W MST1P07236 462 aa1.49□□□□□ -2.17
HKR1YDR420W KEX2P13134 814 aa1.49□□□□□ -2.17
HKR1YDR420W SEC63P14906 663 aa1.49□□□□□ -2.17
HKR1YDR420W KAR4P25583 335 aa1.49□□□□□ -2.17
HKR1YDR420W SRB4P32569 687 aa1.49□□□□□ -2.17
HKR1YDR420W GLC3P32775 704 aa1.49□□□□□ -2.17
HKR1YDR420W HSP78P33416 811 aa1.49□□□□□ -2.17
HKR1YDR420W MOT2P34909 587 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W CST6P40535 587 aa1.49□□□□□ -2.17
HKR1YDR420W SNL1P40548 159 aa1.49□□□□□ -2.17
HKR1YDR420W PBP1P53297 722 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W BRE5P53741 515 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W FYV6P53913 173 aa1.49□□□□□ -2.17
HKR1YDR420W NUP116Q02630 1113 aa1.49□□□□□ -2.17
HKR1YDR420W RVB1Q03940 463 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W RAD33Q04231 177 aa1.49□□□□□ -2.17
HKR1YDR420W YKU80Q04437 629 aa1.49□□□□□ -2.17
HKR1YDR420W YLR125WQ12138 136 aa1.49□□□□□ -2.17
HKR1YDR420W BUG1Q12191 341 aa1.49□□□□□ -2.17
HKR1YDR420W JIP3O13555 125 aa1.49□□□□□ -2.17
HKR1YDR420W ATP4P05626 244 aa1.49□□□□□ -2.17
HKR1YDR420W FAR1P21268 830 aa1.49□□□□□ -2.17
HKR1YDR420W SCJ1P25303 377 aa1.49□□□□□ -2.17
HKR1YDR420W RDS1P25611 832 aa1.49□□□□□ -2.17
HKR1YDR420W ATP11P32453 318 aa1.49□□□□□ -2.17
HKR1YDR420W SER1P33330 395 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W RFC1P38630 861 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W RRF1P38771 230 aa1.49□□□□□ -2.17
HKR1YDR420W RTC3P38804 111 aaPredicted RBP1.49□□□□□ -2.17
HKR1YDR420W GGA2P38817 585 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W LIN1P38852 340 aaPredicted RBP1.49□□□□□ -2.17
HKR1YDR420W GIM4P40005 111 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W RPN3P40016 523 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W SER3P40054 469 aa1.49□□□□□ -2.17
HKR1YDR420W YRB2P40517 327 aa1.49□□□□□ -2.17
HKR1YDR420W YKE2P52553 114 aa1.49□□□□□ -2.17
HKR1YDR420W SEC5P89102 971 aa1.49□□□□□ -2.17
HKR1YDR420W KAP120Q02932 1032 aa1.49□□□□□ -2.17
HKR1YDR420W YML108WQ03759 105 aa1.49□□□□□ -2.17
HKR1YDR420W SGD1Q06132 899 aa1.49□□□□□ -2.17
HKR1YDR420W ORM2Q06144 216 aa1.49□□□□□ -2.17
HKR1YDR420W EAF1Q06337 982 aa1.49□□□□□ -2.17
HKR1YDR420W HIM1Q06674 414 aa1.49□□□□□ -2.17
HKR1YDR420W HAT1Q12341 374 aa1.49□□□□□ -2.17
HKR1YDR420W LAG2Q92325 660 aa1.49□□□□□ -2.17
HKR1YDR420W SEY1Q99287 776 aa1.49□□□□□ -2.17
HKR1YDR420W YRF1-2P40105 1681 aa1.49□□□□□ -2.17
HKR1YDR420W AUS1Q08409 1394 aa1.49□□□□□ -2.17
HKR1YDR420W YAP1P19880 650 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms