RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YPL109CQ02981 657 aa4.47□□□□□ -1.69
TRS85YDR108W WAR1Q03631 944 aa4.47□□□□□ -1.69
TRS85YDR108W DML1Q03652 475 aa4.47□□□□□ -1.69
TRS85YDR108W SXM1Q04175 944 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W NNT1Q05874 261 aa4.47□□□□□ -1.69
TRS85YDR108W SMD2Q06217 110 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W THI22Q06490 572 aa4.47□□□□□ -1.69
TRS85YDR108W CSR1Q06705 408 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W CLP1Q08685 445 aaPredicted RBP4.47□□□□□ -1.69
TRS85YDR108W MSH5Q12175 901 aa4.47□□□□□ -1.69
TRS85YDR108W NOT5Q12514 560 aaPredicted RBP4.47□□□□□ -1.69
TRS85YDR108W SSK22P25390 1331 aaPredicted RBP4.47□□□□□ -1.69
TRS85YDR108W YML002WP0CF17 737 aa4.47□□□□□ -1.69
TRS85YDR108W VAN1P23642 535 aa4.47□□□□□ -1.69
TRS85YDR108W CDC15P27636 974 aa4.47□□□□□ -1.69
TRS85YDR108W SLA2P33338 968 aa4.47□□□□□ -1.69
TRS85YDR108W BMH2P34730 273 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W YKL222CP35995 705 aa4.47□□□□□ -1.69
TRS85YDR108W DBP7P36120 742 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W PPX1P38698 397 aa4.47□□□□□ -1.69
TRS85YDR108W RRM3P38766 723 aa4.47□□□□□ -1.69
TRS85YDR108W UTP18P40362 594 aaPredicted RBP4.47□□□□□ -1.69
TRS85YDR108W FYV10P40492 516 aa4.47□□□□□ -1.69
TRS85YDR108W TFG2P41896 400 aaPredicted RBP4.47□□□□□ -1.69
TRS85YDR108W LAM5P43560 674 aa4.47□□□□□ -1.69
TRS85YDR108W HAM1P47119 197 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W TEL2P53038 688 aa4.47□□□□□ -1.69
TRS85YDR108W PEX14P53112 341 aa4.47□□□□□ -1.69
TRS85YDR108W DIP5P53388 608 aa4.47□□□□□ -1.69
TRS85YDR108W DCP2P53550 970 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W GTR1Q00582 310 aa4.47□□□□□ -1.69
TRS85YDR108W ULP1Q02724 621 aa4.47□□□□□ -1.69
TRS85YDR108W GIR2Q03768 265 aaPredicted RBP4.47□□□□□ -1.69
TRS85YDR108W YPQ2Q06328 317 aa4.47□□□□□ -1.69
TRS85YDR108W CDC16P09798 840 aa4.46□□□□□ -1.7
TRS85YDR108W RPL19AP0CX82 189 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W RPL19BP0CX83 189 aaPredicted RBP4.46□□□□□ -1.7
TRS85YDR108W SBP1P10080 294 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W THR1P17423 357 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W KGD2P19262 463 aaPredicted RBP4.46□□□□□ -1.7
TRS85YDR108W VPS1P21576 704 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W BMH1P29311 267 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W GLN1P32288 370 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W CBF2P32504 956 aa4.46□□□□□ -1.7
TRS85YDR108W NFU1P32860 256 aa4.46□□□□□ -1.7
TRS85YDR108W STO1P34160 861 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W PRX1P34227 261 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W OCT1P35999 772 aa4.46□□□□□ -1.7
TRS85YDR108W TRZ1P36159 838 aaPredicted RBP4.46□□□□□ -1.7
TRS85YDR108W MRPL40P36534 297 aa4.46□□□□□ -1.7
TRS85YDR108W RTS1P38903 757 aa4.46□□□□□ -1.7
TRS85YDR108W NOC2P39744 710 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W BIM1P40013 344 aa4.46□□□□□ -1.7
TRS85YDR108W SAP185P40856 1058 aa4.46□□□□□ -1.7
TRS85YDR108W PHB1P40961 287 aa4.46□□□□□ -1.7
TRS85YDR108W STB2P46679 850 aa4.46□□□□□ -1.7
TRS85YDR108W FYV8P46949 817 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W BFA1P47113 574 aa4.46□□□□□ -1.7
TRS85YDR108W RTC4P53850 401 aa4.46□□□□□ -1.7
TRS85YDR108W UFD2P54860 961 aa4.46□□□□□ -1.7
TRS85YDR108W PNG1Q02890 363 aa4.46□□□□□ -1.7
TRS85YDR108W FIN1Q03898 291 aa4.46□□□□□ -1.7
TRS85YDR108W RSM24Q03976 319 aa4.46□□□□□ -1.7
TRS85YDR108W PPM1Q04081 328 aa4.46□□□□□ -1.7
TRS85YDR108W RTT10Q08924 1013 aa4.46□□□□□ -1.7
TRS85YDR108W RKM1Q08961 583 aaPredicted RBP4.46□□□□□ -1.7
TRS85YDR108W DDP1Q99321 188 aaKnown RBP4.46□□□□□ -1.7
TRS85YDR108W GPA1P08539 472 aa4.45□□□□□ -1.7
TRS85YDR108W ADE2P21264 571 aaKnown RBP4.45□□□□□ -1.7
TRS85YDR108W YJU2P28320 278 aaPredicted RBP4.45□□□□□ -1.7
TRS85YDR108W MRE11P32829 692 aa4.45□□□□□ -1.7
TRS85YDR108W FES1P38260 290 aa4.45□□□□□ -1.7
TRS85YDR108W FTR1P40088 404 aa4.45□□□□□ -1.7
TRS85YDR108W YTA6P40328 754 aa4.45□□□□□ -1.7
TRS85YDR108W RNR4P49723 345 aaKnown RBP4.45□□□□□ -1.7
TRS85YDR108W HFM1P51979 1187 aa4.45□□□□□ -1.7
TRS85YDR108W YNL058CP53947 316 aa4.45□□□□□ -1.7
TRS85YDR108W SPC24Q04477 213 aa4.45□□□□□ -1.7
TRS85YDR108W ATG17Q06410 417 aa4.45□□□□□ -1.7
TRS85YDR108W ATG13Q06628 738 aa4.45□□□□□ -1.7
TRS85YDR108W UBX5Q06682 500 aa4.45□□□□□ -1.7
TRS85YDR108W SCM3Q12334 223 aa4.45□□□□□ -1.7
TRS85YDR108W OSH2Q12451 1283 aa4.45□□□□□ -1.7
TRS85YDR108W ADE6P38972 1358 aaKnown RBP4.45□□□□□ -1.7
TRS85YDR108W SCJ1P25303 377 aa4.45□□□□□ -1.7
TRS85YDR108W PRD1P25375 712 aa4.45□□□□□ -1.7
TRS85YDR108W MSH2P25847 964 aa4.45□□□□□ -1.7
TRS85YDR108W VPH2P32341 215 aa4.45□□□□□ -1.7
TRS85YDR108W PEP7P32609 515 aa4.45□□□□□ -1.7
TRS85YDR108W IFA38P38286 347 aa4.45□□□□□ -1.7
TRS85YDR108W VMA22P38784 181 aa4.45□□□□□ -1.7
TRS85YDR108W YER130CP39959 443 aa4.45□□□□□ -1.7
TRS85YDR108W ALB1P47019 175 aaPredicted RBP4.45□□□□□ -1.7
TRS85YDR108W ECM11Q04110 302 aa4.45□□□□□ -1.7
TRS85YDR108W BBP1Q12365 385 aa4.45□□□□□ -1.7
TRS85YDR108W YDL206WQ12424 762 aa4.45□□□□□ -1.7
TRS85YDR108W YIL002W-AQ3E7Z5 69 aa4.45□□□□□ -1.7
TRS85YDR108W PDR11P40550 1411 aa4.45□□□□□ -1.7
TRS85YDR108W SIR4P11978 1358 aa4.44□□□□□ -1.7
TRS85YDR108W OCA4P25366 362 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms