RNA–Protein interactions for RNA: YDR067C

OCA6, Transcript of Cytoplasmic protein required for replication of Brome mosaic virus, yeast

Gene OCA6, Length 675 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
OCA6	YDR067C	YAP1801	P38856	637 aa		5.03	□□□□□ -1.6
OCA6	YDR067C	SRP1	Q02821	542 aa	Known RBP	5.03	□□□□□ -1.6
OCA6	YDR067C	DUS3	Q06053	668 aa	Known RBP	5.03	□□□□□ -1.6
OCA6	YDR067C	YLL058W	Q12198	575 aa		5.03	□□□□□ -1.6
OCA6	YDR067C	PAM1	P37304	830 aa	Known RBP	5.02	□□□□□ -1.61
OCA6	YDR067C	SRP101	P32916	621 aa		5.01	□□□□□ -1.61
OCA6	YDR067C	GIC1	P38785	314 aa		5.01	□□□□□ -1.61
OCA6	YDR067C	SRT1	Q03175	343 aa		5.01	□□□□□ -1.61
OCA6	YDR067C	SHE9	Q04172	456 aa		5.01	□□□□□ -1.61
OCA6	YDR067C	YDR306C	Q06640	478 aa		5.01	□□□□□ -1.61
OCA6	YDR067C	CDA1	Q06702	301 aa		5.01	□□□□□ -1.61
OCA6	YDR067C	KCS1	Q12494	1050 aa		5.01	□□□□□ -1.61
OCA6	YDR067C	FUN30	P31380	1131 aa		5	□□□□□ -1.61
OCA6	YDR067C	PPH3	P32345	308 aa		5	□□□□□ -1.61
OCA6	YDR067C	NPP2	P39997	493 aa		5	□□□□□ -1.61
OCA6	YDR067C	CHA4	P43634	648 aa		5	□□□□□ -1.61
OCA6	YDR067C	EXG2	P52911	562 aa		5	□□□□□ -1.61
OCA6	YDR067C	YGR012W	P53206	393 aa		5	□□□□□ -1.61
OCA6	YDR067C	CTF4	Q01454	927 aa		5	□□□□□ -1.61
OCA6	YDR067C	TDA5	Q06417	326 aa	Known RBP	5	□□□□□ -1.61
OCA6	YDR067C	CDC12	P32468	407 aa	Known RBP	4.99	□□□□□ -1.61
OCA6	YDR067C	MRP8	P35719	219 aa		4.99	□□□□□ -1.61
OCA6	YDR067C	ECM21	P38167	1117 aa	Known RBP	4.99	□□□□□ -1.61
OCA6	YDR067C	LAS17	Q12446	633 aa		4.99	□□□□□ -1.61
OCA6	YDR067C	SPE1	P08432	466 aa		4.98	□□□□□ -1.61
OCA6	YDR067C	AAR2	P32357	355 aa	Predicted RBP	4.98	□□□□□ -1.61
OCA6	YDR067C	SPF1	P39986	1215 aa	Known RBP	4.98	□□□□□ -1.61
OCA6	YDR067C	SFB2	P53953	876 aa		4.98	□□□□□ -1.61
OCA6	YDR067C	YPR196W	Q06595	470 aa		4.98	□□□□□ -1.61
OCA6	YDR067C	WHI4	Q07655	649 aa	Known RBP	4.98	□□□□□ -1.61
OCA6	YDR067C	WRS1	Q12109	432 aa	Known RBP	4.98	□□□□□ -1.61
OCA6	YDR067C	RAD53	P22216	821 aa		4.97	□□□□□ -1.61
OCA6	YDR067C	PBY1	P38254	753 aa		4.97	□□□□□ -1.61
OCA6	YDR067C	CCC2	P38995	1004 aa		4.97	□□□□□ -1.61
OCA6	YDR067C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
OCA6	YDR067C	PSP2	P50109	593 aa	Known RBP	4.97	□□□□□ -1.61
OCA6	YDR067C	HSF1	P10961	833 aa		4.96	□□□□□ -1.62
OCA6	YDR067C	PFK1	P16861	987 aa	Known RBP	4.96	□□□□□ -1.62
OCA6	YDR067C	HRR25	P29295	494 aa	Known RBP	4.96	□□□□□ -1.62
OCA6	YDR067C	IRR1	P40541	1150 aa		4.96	□□□□□ -1.62
OCA6	YDR067C	NOP7	P53261	605 aa	Known RBP	4.96	□□□□□ -1.62
OCA6	YDR067C	TPO2	P53283	614 aa		4.96	□□□□□ -1.62
OCA6	YDR067C	NPC2	Q12408	173 aa		4.96	□□□□□ -1.62
OCA6	YDR067C	RPP2A	P05319	106 aa	Known RBP	4.95	□□□□□ -1.62
OCA6	YDR067C	YBR184W	P38299	523 aa		4.95	□□□□□ -1.62
OCA6	YDR067C	YER158C	P40095	573 aa		4.95	□□□□□ -1.62
OCA6	YDR067C	ADE8	P04161	214 aa		4.94	□□□□□ -1.62
OCA6	YDR067C	PRP9	P19736	530 aa	Known RBP	4.94	□□□□□ -1.62
OCA6	YDR067C	GRX1	P25373	110 aa	Known RBP	4.94	□□□□□ -1.62
OCA6	YDR067C	STE5	P32917	917 aa		4.94	□□□□□ -1.62
OCA6	YDR067C	YRO2	P38079	344 aa		4.94	□□□□□ -1.62
OCA6	YDR067C	GYP7	P48365	746 aa		4.94	□□□□□ -1.62
OCA6	YDR067C	SSF2	Q12153	453 aa	Predicted RBP	4.94	□□□□□ -1.62
OCA6	YDR067C	IOC3	P43596	787 aa		4.93	□□□□□ -1.62
OCA6	YDR067C	NCS6	P53088	359 aa		4.93	□□□□□ -1.62
OCA6	YDR067C	NPP1	P25353	742 aa		4.92	□□□□□ -1.62
OCA6	YDR067C	CDC48	P25694	835 aa	Known RBP	4.92	□□□□□ -1.62
OCA6	YDR067C	RPC82	P32349	654 aa		4.92	□□□□□ -1.62
OCA6	YDR067C	TSL1	P38427	1098 aa	Known RBP	4.92	□□□□□ -1.62
OCA6	YDR067C	ALR2	P43553	858 aa		4.92	□□□□□ -1.62
OCA6	YDR067C	BUL1	P48524	976 aa		4.92	□□□□□ -1.62
OCA6	YDR067C	AIM39	Q08223	395 aa		4.92	□□□□□ -1.62
OCA6	YDR067C	KAR4	P25583	335 aa		4.91	□□□□□ -1.62
OCA6	YDR067C	YKR078W	P36158	585 aa	Known RBP	4.91	□□□□□ -1.62
OCA6	YDR067C	URM1	P40554	99 aa	Predicted RBP	4.91	□□□□□ -1.62
OCA6	YDR067C	NAN1	Q02931	896 aa	Known RBP	4.91	□□□□□ -1.62
OCA6	YDR067C	PPM2	Q08282	695 aa		4.91	□□□□□ -1.62
OCA6	YDR067C	NOT3	P06102	836 aa	Known RBP	4.9	□□□□□ -1.63
OCA6	YDR067C	ATG19	P35193	415 aa		4.9	□□□□□ -1.63
OCA6	YDR067C	YPT53	P36019	220 aa		4.9	□□□□□ -1.63
OCA6	YDR067C	PFD1	P46988	109 aa		4.9	□□□□□ -1.63
OCA6	YDR067C	RAI1	P53063	387 aa	Known RBP	4.9	□□□□□ -1.63
OCA6	YDR067C	URN1	Q06525	465 aa	Known RBP	4.9	□□□□□ -1.63
OCA6	YDR067C	YLR040C	Q07988	224 aa		4.9	□□□□□ -1.63
OCA6	YDR067C	AFR1	P33304	620 aa		4.89	□□□□□ -1.63
OCA6	YDR067C	ERT1	P38140	529 aa		4.89	□□□□□ -1.63
OCA6	YDR067C	YBR284W	P38150	797 aa		4.89	□□□□□ -1.63
OCA6	YDR067C	MOH1	P38191	138 aa		4.89	□□□□□ -1.63
OCA6	YDR067C	EAF1	Q06337	982 aa		4.89	□□□□□ -1.63
OCA6	YDR067C	UBX5	Q06682	500 aa		4.89	□□□□□ -1.63
OCA6	YDR067C	SPO75	Q07798	868 aa		4.89	□□□□□ -1.63
OCA6	YDR067C	FMP25	Q08023	583 aa		4.89	□□□□□ -1.63
OCA6	YDR067C	RAD4	P14736	754 aa		4.88	□□□□□ -1.63
OCA6	YDR067C	CDC11	P32458	415 aa		4.88	□□□□□ -1.63
OCA6	YDR067C	HBS1	P32769	611 aa	Known RBP	4.88	□□□□□ -1.63
OCA6	YDR067C	OAR1	P35731	278 aa		4.88	□□□□□ -1.63
OCA6	YDR067C	SIT1	P39980	628 aa		4.88	□□□□□ -1.63
OCA6	YDR067C	ERP6	P53198	216 aa		4.88	□□□□□ -1.63
OCA6	YDR067C	CAD1	P24813	409 aa	Known RBP	4.87	□□□□□ -1.63
OCA6	YDR067C	ARE1	P25628	610 aa		4.87	□□□□□ -1.63
OCA6	YDR067C	RPL8B	P29453	256 aa	Known RBP	4.87	□□□□□ -1.63
OCA6	YDR067C	EFT1	P32324	842 aa	Known RBP	4.87	□□□□□ -1.63
OCA6	YDR067C	CCM1	P48237	864 aa	Predicted RBP	4.87	□□□□□ -1.63
OCA6	YDR067C	VPS30	Q02948	557 aa		4.87	□□□□□ -1.63
OCA6	YDR067C	LCD1	Q04377	747 aa		4.87	□□□□□ -1.63
OCA6	YDR067C	ENB1	Q08299	606 aa		4.87	□□□□□ -1.63
OCA6	YDR067C	UPC2	Q12151	913 aa		4.87	□□□□□ -1.63
OCA6	YDR067C	YPR071W	Q12346	211 aa		4.87	□□□□□ -1.63
OCA6	YDR067C	OSH2	Q12451	1283 aa		4.87	□□□□□ -1.63
OCA6	YDR067C	RFA1	P22336	621 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms