RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C RPO26P20435 155 aa1.18□□□□□ -2.22
VAM6YDL077C PRE10P21242 288 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
VAM6YDL077C PWP1P21304 576 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C SSA4P22202 642 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C GSY1P23337 708 aa1.18□□□□□ -2.22
VAM6YDL077C MCM3P24279 971 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C SPB1P25582 841 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C CPR3P25719 182 aa1.18□□□□□ -2.22
VAM6YDL077C CPS1P27614 576 aa1.18□□□□□ -2.22
VAM6YDL077C MCM2P29469 868 aa1.18□□□□□ -2.22
VAM6YDL077C DPH5P32469 300 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C PXL1P36166 706 aa1.18□□□□□ -2.22
VAM6YDL077C YBR242WP38331 238 aa1.18□□□□□ -2.22
VAM6YDL077C RRM3P38766 723 aa1.18□□□□□ -2.22
VAM6YDL077C RVS167P39743 482 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C SNL1P40548 159 aa1.18□□□□□ -2.22
VAM6YDL077C PHB1P40961 287 aa1.18□□□□□ -2.22
VAM6YDL077C LYS14P40971 790 aa1.18□□□□□ -2.22
VAM6YDL077C XKS1P42826 600 aa1.18□□□□□ -2.22
VAM6YDL077C JJJ2P46997 583 aa1.18□□□□□ -2.22
VAM6YDL077C PRY1P47032 299 aa1.18□□□□□ -2.22
VAM6YDL077C SNX4P47057 423 aa1.18□□□□□ -2.22
VAM6YDL077C IPI3P53877 555 aa1.18□□□□□ -2.22
VAM6YDL077C BNI5P53890 448 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C RPL22BP56628 122 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C NPL3Q01560 414 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
VAM6YDL077C MEH1Q02205 184 aa1.18□□□□□ -2.22
VAM6YDL077C PNG1Q02890 363 aa1.18□□□□□ -2.22
VAM6YDL077C TFB3Q03290 321 aa1.18□□□□□ -2.22
VAM6YDL077C RVB1Q03940 463 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C RRP17Q04031 235 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C TAP42Q04372 366 aa1.18□□□□□ -2.22
VAM6YDL077C SPC24Q04477 213 aa1.18□□□□□ -2.22
VAM6YDL077C FAR8Q05040 523 aa1.18□□□□□ -2.22
VAM6YDL077C YDR338CQ05497 695 aa1.18□□□□□ -2.22
VAM6YDL077C ATG17Q06410 417 aa1.18□□□□□ -2.22
VAM6YDL077C SYO1Q07395 620 aa1.18□□□□□ -2.22
VAM6YDL077C YOR289WQ12012 251 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C ICL2Q12031 575 aa1.18□□□□□ -2.22
VAM6YDL077C NUR1Q12066 484 aa1.18□□□□□ -2.22
VAM6YDL077C GET4Q12125 312 aa1.18□□□□□ -2.22
VAM6YDL077C RUD3Q12234 484 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C CLF1Q12309 687 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C BRR1Q99177 341 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C DUR1,2P32528 1835 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C SPO14P36126 1683 aa1.17□□□□□ -2.22
VAM6YDL077C NTE1Q04958 1679 aa1.17□□□□□ -2.22
VAM6YDL077C SSA1P10591 642 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C MER1P16523 270 aa1.17□□□□□ -2.22
VAM6YDL077C SEN2P16658 377 aa1.17□□□□□ -2.22
VAM6YDL077C GAL11P19659 1081 aa1.17□□□□□ -2.22
VAM6YDL077C CLB4P24871 460 aa1.17□□□□□ -2.22
VAM6YDL077C TSR4P25040 408 aa1.17□□□□□ -2.22
VAM6YDL077C PUF4P25339 888 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22 RIP-Chip
VAM6YDL077C PHO87P25360 923 aa1.17□□□□□ -2.22
VAM6YDL077C KCC4P25389 1037 aa1.17□□□□□ -2.22
VAM6YDL077C SEC20P28791 383 aa1.17□□□□□ -2.22
VAM6YDL077C COQ2P32378 372 aa1.17□□□□□ -2.22
VAM6YDL077C SMI1P32566 505 aa1.17□□□□□ -2.22
VAM6YDL077C YKR015CP36111 568 aa1.17□□□□□ -2.22
VAM6YDL077C MUM2P38236 366 aa1.17□□□□□ -2.22
VAM6YDL077C CCT4P39078 528 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C TIF4631P39935 952 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C FTR1P40088 404 aa1.17□□□□□ -2.22
VAM6YDL077C VID27P40157 782 aa1.17□□□□□ -2.22
VAM6YDL077C CCT5P40413 562 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C DJP1P40564 432 aa1.17□□□□□ -2.22
VAM6YDL077C EMP47P43555 445 aa1.17□□□□□ -2.22
VAM6YDL077C ALT1P52893 592 aa1.17□□□□□ -2.22
VAM6YDL077C ARI1P53111 347 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C DNM1P54861 757 aa1.17□□□□□ -2.22
VAM6YDL077C SEC5P89102 971 aa1.17□□□□□ -2.22
VAM6YDL077C CWC21Q03375 135 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C TAF8Q03750 510 aa1.17□□□□□ -2.22
VAM6YDL077C UTP13Q05946 817 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C YDL144CQ07589 356 aa1.17□□□□□ -2.22
VAM6YDL077C CMS1Q07897 291 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C SGO1Q08490 590 aa1.17□□□□□ -2.22
VAM6YDL077C YOR352WQ08816 343 aa1.17□□□□□ -2.22
VAM6YDL077C RSA1Q08932 381 aa1.17□□□□□ -2.22
VAM6YDL077C YIG1Q08956 461 aa1.17□□□□□ -2.22
VAM6YDL077C RKM1Q08961 583 aaPredicted RBP1.17□□□□□ -2.22
VAM6YDL077C TAF10Q12030 206 aa1.17□□□□□ -2.22
VAM6YDL077C MSH5Q12175 901 aa1.17□□□□□ -2.22
VAM6YDL077C RIO1Q12196 484 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C TY1A-DR3Q12441 440 aa1.17□□□□□ -2.22
VAM6YDL077C BIK1P11709 440 aa1.17□□□□□ -2.22
VAM6YDL077C SEC23P15303 768 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C SEC18P18759 758 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C UBA1P22515 1024 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C KRR1P25586 316 aaPredicted RBP1.17□□□□□ -2.22
VAM6YDL077C BUD23P25627 275 aaPredicted RBP1.17□□□□□ -2.22
VAM6YDL077C MGM1P32266 881 aa1.17□□□□□ -2.22
VAM6YDL077C KAR9P32526 644 aa1.17□□□□□ -2.22
VAM6YDL077C SEC6P32844 805 aa1.17□□□□□ -2.22
VAM6YDL077C STE5P32917 917 aa1.17□□□□□ -2.22
VAM6YDL077C NUP120P35729 1037 aa1.17□□□□□ -2.22
VAM6YDL077C CSE4P36012 229 aa1.17□□□□□ -2.22
VAM6YDL077C MAK5P38112 773 aaPredicted RBP1.17□□□□□ -2.22
VAM6YDL077C YBL036CP38197 257 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms