RNA–Protein interactions for RNA: YCR044C

PER1, Transcript of Protein of the endoplasmic reticulum, yeast

Gene PER1, Length 1,074 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PER1	YCR044C	DPB3	P27344	201 aa		4.9	□□□□□ -1.63
PER1	YCR044C	YEL043W	P32618	956 aa		4.9	□□□□□ -1.63
PER1	YCR044C	ANP1	P32629	500 aa		4.9	□□□□□ -1.63
PER1	YCR044C	LIP5	P32875	414 aa		4.9	□□□□□ -1.63
PER1	YCR044C	PCH2	P38126	564 aa		4.9	□□□□□ -1.63
PER1	YCR044C	RTS1	P38903	757 aa		4.9	□□□□□ -1.63
PER1	YCR044C	CCC2	P38995	1004 aa		4.9	□□□□□ -1.63
PER1	YCR044C	CAJ1	P39101	391 aa		4.9	□□□□□ -1.63
PER1	YCR044C	YIR042C	P40586	236 aa		4.9	□□□□□ -1.63
PER1	YCR044C	OSW7	P43611	510 aa		4.9	□□□□□ -1.63
PER1	YCR044C	YJL181W	P46987	611 aa		4.9	□□□□□ -1.63
PER1	YCR044C	SMC3	P47037	1230 aa		4.9	□□□□□ -1.63
PER1	YCR044C	PRP31	P49704	494 aa	Predicted RBP	4.9	□□□□□ -1.63
PER1	YCR044C	UTP22	P53254	1237 aa	Predicted RBP	4.9	□□□□□ -1.63
PER1	YCR044C	RTC4	P53850	401 aa		4.9	□□□□□ -1.63
PER1	YCR044C	MRX10	Q05648	414 aa		4.9	□□□□□ -1.63
PER1	YCR044C	VPS38	Q05919	439 aa		4.9	□□□□□ -1.63
PER1	YCR044C	MMR1	Q06324	491 aa		4.9	□□□□□ -1.63
PER1	YCR044C	PTC5	Q12511	572 aa		4.9	□□□□□ -1.63
PER1	YCR044C	SEC23	P15303	768 aa	Known RBP	4.89	□□□□□ -1.63
PER1	YCR044C	ALG1	P16661	449 aa		4.89	□□□□□ -1.63
PER1	YCR044C	MAK31	P23059	88 aa		4.89	□□□□□ -1.63
PER1	YCR044C	MSH3	P25336	1018 aa		4.89	□□□□□ -1.63
PER1	YCR044C	HIR1	P32479	840 aa		4.89	□□□□□ -1.63
PER1	YCR044C	KAP122	P32767	1081 aa		4.89	□□□□□ -1.63
PER1	YCR044C	BOI1	P38041	980 aa	Known RBP	4.89	□□□□□ -1.63
PER1	YCR044C	TOS1	P38288	455 aa		4.89	□□□□□ -1.63
PER1	YCR044C	EFM2	P38347	419 aa		4.89	□□□□□ -1.63
PER1	YCR044C	PCI8	P40512	444 aa		4.89	□□□□□ -1.63
PER1	YCR044C	MSH4	P40965	878 aa	Predicted RBP	4.89	□□□□□ -1.63
PER1	YCR044C	DAK2	P43550	591 aa		4.89	□□□□□ -1.63
PER1	YCR044C	CAF130	P53280	1122 aa	Predicted RBP	4.89	□□□□□ -1.63
PER1	YCR044C	HDA1	P53973	706 aa		4.89	□□□□□ -1.63
PER1	YCR044C	UTP4	Q06679	776 aa	Known RBP	4.89	□□□□□ -1.63
PER1	YCR044C	YOR296W	Q08748	1289 aa		4.89	□□□□□ -1.63
PER1	YCR044C	AFT2	Q08957	416 aa		4.89	□□□□□ -1.63
PER1	YCR044C	PSF3	Q12146	194 aa		4.89	□□□□□ -1.63
PER1	YCR044C	BUG1	Q12191	341 aa		4.89	□□□□□ -1.63
PER1	YCR044C	TIP41	Q12199	356 aa		4.89	□□□□□ -1.63
PER1	YCR044C	GIN4	Q12263	1142 aa		4.89	□□□□□ -1.63
PER1	YCR044C	SPO11	P23179	398 aa		4.88	□□□□□ -1.63
PER1	YCR044C	MSH1	P25846	959 aa		4.88	□□□□□ -1.63
PER1	YCR044C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
PER1	YCR044C	STO1	P34160	861 aa	Known RBP	4.88	□□□□□ -1.63
PER1	YCR044C	APM2	P38700	605 aa		4.88	□□□□□ -1.63
PER1	YCR044C	CTM1	P38818	585 aa		4.88	□□□□□ -1.63
PER1	YCR044C	RAD26	P40352	1085 aa		4.88	□□□□□ -1.63
PER1	YCR044C	NDC80	P40460	691 aa		4.88	□□□□□ -1.63
PER1	YCR044C	RPN11	P43588	306 aa	Known RBP	4.88	□□□□□ -1.63
PER1	YCR044C	FYV8	P46949	817 aa	Known RBP	4.88	□□□□□ -1.63
PER1	YCR044C	YGL138C	P53122	345 aa		4.88	□□□□□ -1.63
PER1	YCR044C	YGR130C	P53278	816 aa		4.88	□□□□□ -1.63
PER1	YCR044C	MYO5	Q04439	1219 aa	Known RBP	4.88	□□□□□ -1.63
PER1	YCR044C	SML1	Q04964	104 aa		4.88	□□□□□ -1.63
PER1	YCR044C	EIS1	Q05050	843 aa	Known RBP	4.88	□□□□□ -1.63
PER1	YCR044C	MRD1	Q06106	887 aa	Known RBP	4.88	□□□□□ -1.63
PER1	YCR044C	TOS4	Q06266	489 aa		4.88	□□□□□ -1.63
PER1	YCR044C	HMI1	Q12039	706 aa		4.88	□□□□□ -1.63
PER1	YCR044C	ATG9	Q12142	997 aa		4.88	□□□□□ -1.63
PER1	YCR044C	HKR1	P41809	1802 aa		4.88	□□□□□ -1.63
PER1	YCR044C	HIS4	P00815	799 aa	Known RBP	4.87	□□□□□ -1.63
PER1	YCR044C	MET6	P05694	767 aa	Known RBP	4.87	□□□□□ -1.63
PER1	YCR044C	CDC37	P06101	506 aa	Known RBP	4.87	□□□□□ -1.63
PER1	YCR044C	SEC65	P29478	273 aa		4.87	□□□□□ -1.63
PER1	YCR044C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	RIP-Chip
PER1	YCR044C	YET1	P35723	206 aa		4.87	□□□□□ -1.63
PER1	YCR044C	PTK1	P36002	662 aa	Predicted RBP	4.87	□□□□□ -1.63
PER1	YCR044C	REI1	P38344	393 aa	Predicted RBP	4.87	□□□□□ -1.63
PER1	YCR044C	YHL050C	P38721	697 aa		4.87	□□□□□ -1.63
PER1	YCR044C	SPL2	P38839	148 aa		4.87	□□□□□ -1.63
PER1	YCR044C	RTT107	P38850	1070 aa		4.87	□□□□□ -1.63
PER1	YCR044C	CCT4	P39078	528 aa	Known RBP	4.87	□□□□□ -1.63
PER1	YCR044C	NPR2	P39923	615 aa		4.87	□□□□□ -1.63
PER1	YCR044C	BUD16	P39988	312 aa		4.87	□□□□□ -1.63
PER1	YCR044C	YGR237C	P50089	785 aa		4.87	□□□□□ -1.63
PER1	YCR044C	BOP3	P53958	396 aa		4.87	□□□□□ -1.63
PER1	YCR044C	MRS2	Q01926	470 aa		4.87	□□□□□ -1.63
PER1	YCR044C	RBA50	Q04418	439 aa		4.87	□□□□□ -1.63
PER1	YCR044C	YDR341C	Q05506	607 aa	Known RBP	4.87	□□□□□ -1.63
PER1	YCR044C	BDF2	Q07442	638 aa		4.87	□□□□□ -1.63
PER1	YCR044C	NEW1	Q08972	1196 aa	Known RBP	4.87	□□□□□ -1.63
PER1	YCR044C	YKL068W-A	Q3E826	78 aa		4.87	□□□□□ -1.63
PER1	YCR044C	YOR111W	Q99210	232 aa		4.87	□□□□□ -1.63
PER1	YCR044C	RAD61	Q99359	647 aa		4.87	□□□□□ -1.63
PER1	YCR044C	MYO1	P08964	1928 aa		4.86	□□□□□ -1.63
PER1	YCR044C	ENO1	P00924	437 aa	Known RBP	4.86	□□□□□ -1.63
PER1	YCR044C	IDI1	P15496	288 aa		4.86	□□□□□ -1.63
PER1	YCR044C	RPO26	P20435	155 aa		4.86	□□□□□ -1.63
PER1	YCR044C	RIT1	P23796	513 aa		4.86	□□□□□ -1.63
PER1	YCR044C	LCB1	P25045	558 aa	Known RBP	4.86	□□□□□ -1.63
PER1	YCR044C	RRP43	P25359	394 aa	Predicted RBP	4.86	□□□□□ -1.63
PER1	YCR044C	KRE2	P27809	442 aa		4.86	□□□□□ -1.63
PER1	YCR044C	DEP1	P31385	405 aa		4.86	□□□□□ -1.63
PER1	YCR044C	HXT5	P38695	592 aa		4.86	□□□□□ -1.63
PER1	YCR044C	TOM71	P38825	639 aa	Known RBP	4.86	□□□□□ -1.63
PER1	YCR044C	SEC9	P40357	651 aa		4.86	□□□□□ -1.63
PER1	YCR044C	CSM2	P40465	213 aa		4.86	□□□□□ -1.63
PER1	YCR044C	LYS14	P40971	790 aa		4.86	□□□□□ -1.63
PER1	YCR044C	YFH7	P43591	353 aa		4.86	□□□□□ -1.63
PER1	YCR044C	AIP1	P46680	615 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms