RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeastyeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT2YCR005C RFT1P38206 574 aaPredicted RBP7.99□□□□□ -1.13
CIT2YCR005C RVS167P39743 482 aaKnown RBP7.99□□□□□ -1.13
CIT2YCR005C NUP85P46673 744 aa7.99□□□□□ -1.13
CIT2YCR005C YJR115WP47152 169 aa7.99□□□□□ -1.13
CIT2YCR005C SLK19Q08581 821 aaKnown RBP7.99□□□□□ -1.13
CIT2YCR005C OXR1Q08952 273 aa7.99□□□□□ -1.13
CIT2YCR005C SWI5P08153 709 aa7.98□□□□□ -1.13
CIT2YCR005C FRS2P15625 503 aaKnown RBP7.98□□□□□ -1.13
CIT2YCR005C ALG1P16661 449 aa7.98□□□□□ -1.13
CIT2YCR005C GSY1P23337 708 aa7.98□□□□□ -1.13
CIT2YCR005C CDC60P26637 1090 aaKnown RBP7.98□□□□□ -1.13
CIT2YCR005C YKT6P36015 200 aaKnown RBP7.98□□□□□ -1.13
CIT2YCR005C CAB3P36076 571 aa7.98□□□□□ -1.13
CIT2YCR005C APE3P37302 537 aaKnown RBP7.98□□□□□ -1.13
CIT2YCR005C SUL1P38359 859 aa7.98□□□□□ -1.13
CIT2YCR005C STT3P39007 718 aaKnown RBP7.98□□□□□ -1.13
CIT2YCR005C GPB2P39717 880 aa7.98□□□□□ -1.13
CIT2YCR005C SPR3P41901 512 aa7.98□□□□□ -1.13
CIT2YCR005C HUL5P53119 910 aa7.98□□□□□ -1.13
CIT2YCR005C LIF1P53150 421 aa7.98□□□□□ -1.13
CIT2YCR005C SDA1P53313 767 aaKnown RBP7.98□□□□□ -1.13
CIT2YCR005C YLH47Q06493 454 aa7.98□□□□□ -1.13
CIT2YCR005C DDP1Q99321 188 aaKnown RBP7.98□□□□□ -1.13
CIT2YCR005C CDC19P00549 500 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C TUF1P02992 437 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C CYT1P07143 309 aa7.97□□□□□ -1.13
CIT2YCR005C MBR1P23493 339 aa7.97□□□□□ -1.13
CIT2YCR005C URA1P28272 314 aaPredicted RBP7.97□□□□□ -1.13
CIT2YCR005C RPN12P32496 274 aa7.97□□□□□ -1.13
CIT2YCR005C ERG7P38604 731 aa7.97□□□□□ -1.13
CIT2YCR005C PAN5P38787 379 aa7.97□□□□□ -1.13
CIT2YCR005C NDT80P38830 627 aa7.97□□□□□ -1.13
CIT2YCR005C LSC2P53312 427 aa7.97□□□□□ -1.13
CIT2YCR005C MFM1Q02783 413 aa7.97□□□□□ -1.13
CIT2YCR005C MMR1Q06324 491 aa7.97□□□□□ -1.13
CIT2YCR005C TIF6Q12522 245 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C TY1B-AO13527 1196 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C HIS4P00815 799 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C CLC1P17891 233 aa7.97□□□□□ -1.13
CIT2YCR005C MCM3P24279 971 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C CDC3P32457 520 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C TGL1P34163 548 aa7.97□□□□□ -1.13
CIT2YCR005C CIT3P43635 486 aa7.97□□□□□ -1.13
CIT2YCR005C ROM1P53046 1155 aa7.97□□□□□ -1.13
CIT2YCR005C CUE3P53137 624 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C OYE2Q03558 400 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C VMS1Q04311 632 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C AIM33Q04516 312 aa7.97□□□□□ -1.13
CIT2YCR005C TMA64Q04600 565 aaKnown RBP7.97□□□□□ -1.13
CIT2YCR005C SPH1Q06160 661 aa7.97□□□□□ -1.13
CIT2YCR005C TY3A-GQ12173 290 aa7.97□□□□□ -1.13
CIT2YCR005C PTC5Q12511 572 aa7.97□□□□□ -1.13
CIT2YCR005C TY3A-IQ99219 290 aa7.97□□□□□ -1.13
CIT2YCR005C ILV1P00927 576 aaKnown RBP7.96□□□□□ -1.14
CIT2YCR005C BMH1P29311 267 aaKnown RBP7.96□□□□□ -1.14
CIT2YCR005C EUG1P32474 517 aa7.96□□□□□ -1.14
CIT2YCR005C SAC6P32599 642 aaKnown RBP7.96□□□□□ -1.14
CIT2YCR005C UTR4P32626 227 aa7.96□□□□□ -1.14
CIT2YCR005C YER130CP39959 443 aa7.96□□□□□ -1.14
CIT2YCR005C SUM1P46676 1062 aa7.96□□□□□ -1.14
CIT2YCR005C YPT11P48559 417 aa7.96□□□□□ -1.14
CIT2YCR005C ATG1P53104 897 aa7.96□□□□□ -1.14
CIT2YCR005C YGR125WP53273 1036 aa7.96□□□□□ -1.14
CIT2YCR005C BUL2Q03758 920 aaKnown RBP7.96□□□□□ -1.14
CIT2YCR005C SVF1Q05515 481 aa7.96□□□□□ -1.14
CIT2YCR005C SGD1Q06132 899 aa7.96□□□□□ -1.14
CIT2YCR005C GUD1Q07729 489 aa7.96□□□□□ -1.14
CIT2YCR005C MCM1P11746 286 aa7.95□□□□□ -1.14
CIT2YCR005C UGA4P32837 571 aa7.95□□□□□ -1.14
CIT2YCR005C MCR1P36060 302 aaKnown RBP7.95□□□□□ -1.14
CIT2YCR005C ISW1P38144 1129 aa7.95□□□□□ -1.14
CIT2YCR005C ETP1P38748 585 aaKnown RBP7.95□□□□□ -1.14
CIT2YCR005C CNM67P53865 581 aaKnown RBP7.95□□□□□ -1.14
CIT2YCR005C YML083CQ04526 418 aa7.95□□□□□ -1.14
CIT2YCR005C DUS3Q06053 668 aaKnown RBP7.95□□□□□ -1.14
CIT2YCR005C ARP6Q12509 438 aa7.95□□□□□ -1.14
CIT2YCR005C SMC6Q12749 1114 aa7.95□□□□□ -1.14
CIT2YCR005C RPL22AP05749 121 aaKnown RBP7.94□□□□□ -1.14
CIT2YCR005C GPA1P08539 472 aa7.94□□□□□ -1.14
CIT2YCR005C CDC15P27636 974 aa7.94□□□□□ -1.14
CIT2YCR005C SRP40P32583 406 aaPredicted RBP7.94□□□□□ -1.14
CIT2YCR005C PGM1P33401 570 aaKnown RBP7.94□□□□□ -1.14
CIT2YCR005C SHP1P34223 423 aa7.94□□□□□ -1.14
CIT2YCR005C MNN4P36044 1178 aa7.94□□□□□ -1.14
CIT2YCR005C RRM3P38766 723 aa7.94□□□□□ -1.14
CIT2YCR005C GAA1P39012 614 aa7.94□□□□□ -1.14
CIT2YCR005C ALA1P40825 983 aaKnown RBP7.94□□□□□ -1.14
CIT2YCR005C YGR153WP48238 217 aa7.94□□□□□ -1.14
CIT2YCR005C UBA2P52488 636 aa7.94□□□□□ -1.14
CIT2YCR005C PSR2Q07949 397 aa7.94□□□□□ -1.14
CIT2YCR005C PHR1P05066 565 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
CIT2YCR005C MCM4P30665 933 aaKnown RBP7.93□□□□□ -1.14
CIT2YCR005C SEC8P32855 1065 aa7.93□□□□□ -1.14
CIT2YCR005C NPR3P38742 1146 aa7.93□□□□□ -1.14
CIT2YCR005C VTC4P47075 721 aa7.93□□□□□ -1.14
CIT2YCR005C CBK1P53894 756 aa7.93□□□□□ -1.14
CIT2YCR005C UBP2Q01476 1272 aa7.93□□□□□ -1.14
CIT2YCR005C TAF13P11747 167 aa7.92□□□□□ -1.14
CIT2YCR005C MOT2P34909 587 aaKnown RBP7.92□□□□□ -1.14
CIT2YCR005C AHP1P38013 176 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 127.7 ms