RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	ADE8	P04161	214 aa		6.64	□□□□□ -1.35
UBS1	YBR165W	EMC1	P25574	760 aa		6.64	□□□□□ -1.35
UBS1	YBR165W	PPH3	P32345	308 aa		6.64	□□□□□ -1.35
UBS1	YBR165W	POA1	P38218	177 aa		6.64	□□□□□ -1.35
UBS1	YBR165W	GIP4	P39732	760 aa		6.64	□□□□□ -1.35
UBS1	YBR165W	GCV2	P49095	1034 aa		6.64	□□□□□ -1.35
UBS1	YBR165W	YKE2	P52553	114 aa		6.64	□□□□□ -1.35
UBS1	YBR165W	TPO2	P53283	614 aa		6.64	□□□□□ -1.35
UBS1	YBR165W	SFB2	P53953	876 aa		6.64	□□□□□ -1.35
UBS1	YBR165W	HSF1	P10961	833 aa		6.63	□□□□□ -1.35
UBS1	YBR165W	NPP1	P25353	742 aa		6.63	□□□□□ -1.35
UBS1	YBR165W	RPL8B	P29453	256 aa	Known RBP	6.63	□□□□□ -1.35
UBS1	YBR165W	AAR2	P32357	355 aa	Predicted RBP	6.63	□□□□□ -1.35
UBS1	YBR165W	YER158C	P40095	573 aa		6.63	□□□□□ -1.35
UBS1	YBR165W	BUL2	Q03758	920 aa	Known RBP	6.63	□□□□□ -1.35
UBS1	YBR165W	YAP6	Q03935	383 aa		6.63	□□□□□ -1.35
UBS1	YBR165W	SPO75	Q07798	868 aa		6.63	□□□□□ -1.35
UBS1	YBR165W	RPP2A	P05319	106 aa	Known RBP	6.62	□□□□□ -1.35
UBS1	YBR165W	ENA1	P13587	1091 aa		6.62	□□□□□ -1.35
UBS1	YBR165W	STE11	P23561	717 aa		6.62	□□□□□ -1.35
UBS1	YBR165W	SCT1	P32784	759 aa		6.62	□□□□□ -1.35
UBS1	YBR165W	LST4	P34239	828 aa		6.62	□□□□□ -1.35
UBS1	YBR165W	YKL222C	P35995	705 aa		6.62	□□□□□ -1.35
UBS1	YBR165W	CHA4	P43634	648 aa		6.62	□□□□□ -1.35
UBS1	YBR165W	ENA2	Q01896	1091 aa		6.62	□□□□□ -1.35
UBS1	YBR165W	ENA5	Q12691	1091 aa		6.62	□□□□□ -1.35
UBS1	YBR165W	HIS5	P07172	385 aa		6.61	□□□□□ -1.35
UBS1	YBR165W	CDC48	P25694	835 aa	Known RBP	6.61	□□□□□ -1.35
UBS1	YBR165W	SRP101	P32916	621 aa		6.61	□□□□□ -1.35
UBS1	YBR165W	ERP6	P53198	216 aa		6.61	□□□□□ -1.35
UBS1	YBR165W	YLR224W	Q05947	369 aa		6.61	□□□□□ -1.35
UBS1	YBR165W	SPE1	P08432	466 aa		6.6	□□□□□ -1.35
UBS1	YBR165W	RAD4	P14736	754 aa		6.6	□□□□□ -1.35
UBS1	YBR165W	CTS1	P29029	562 aa		6.6	□□□□□ -1.35
UBS1	YBR165W	ATG19	P35193	415 aa		6.6	□□□□□ -1.35
UBS1	YBR165W	ALR2	P43553	858 aa		6.6	□□□□□ -1.35
UBS1	YBR165W	PSP2	P50109	593 aa	Known RBP	6.6	□□□□□ -1.35
UBS1	YBR165W	EAF1	Q06337	982 aa		6.6	□□□□□ -1.35
UBS1	YBR165W	CDC11	P32458	415 aa		6.59	□□□□□ -1.35
UBS1	YBR165W	YRO2	P38079	344 aa		6.59	□□□□□ -1.35
UBS1	YBR165W	CCC2	P38995	1004 aa		6.59	□□□□□ -1.35
UBS1	YBR165W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	6.59	□□□□□ -1.35	not detected
UBS1	YBR165W	URM1	P40554	99 aa	Predicted RBP	6.59	□□□□□ -1.35
UBS1	YBR165W	LCD1	Q04377	747 aa		6.59	□□□□□ -1.35
UBS1	YBR165W	SHM2	P37291	469 aa	Known RBP	6.58	□□□□□ -1.36
UBS1	YBR165W	CCM1	P48237	864 aa	Predicted RBP	6.58	□□□□□ -1.36
UBS1	YBR165W	MNN10	P50108	393 aa	Known RBP	6.58	□□□□□ -1.36
UBS1	YBR165W	YPR196W	Q06595	470 aa		6.58	□□□□□ -1.36
UBS1	YBR165W	YHR020W	P38708	688 aa	Known RBP	6.57	□□□□□ -1.36
UBS1	YBR165W	OSH2	Q12451	1283 aa		6.57	□□□□□ -1.36
UBS1	YBR165W	PLB1	P39105	664 aa		6.56	□□□□□ -1.36
UBS1	YBR165W	TOK1	P40310	691 aa		6.56	□□□□□ -1.36
UBS1	YBR165W	NNF1	P47149	201 aa		6.56	□□□□□ -1.36
UBS1	YBR165W	TMA10	Q06177	86 aa		6.56	□□□□□ -1.36
UBS1	YBR165W	UBX5	Q06682	500 aa		6.56	□□□□□ -1.36
UBS1	YBR165W	HBN1	Q96VH4	193 aa		6.56	□□□□□ -1.36
UBS1	YBR165W	HSP60	P19882	572 aa	Known RBP	6.55	□□□□□ -1.36
UBS1	YBR165W	TIM54	P47045	478 aa		6.55	□□□□□ -1.36
UBS1	YBR165W	RAI1	P53063	387 aa	Known RBP	6.55	□□□□□ -1.36
UBS1	YBR165W	CIT1	P00890	479 aa		6.54	□□□□□ -1.36
UBS1	YBR165W	DCG1	P32460	244 aa		6.54	□□□□□ -1.36
UBS1	YBR165W	REC104	P33323	182 aa		6.54	□□□□□ -1.36
UBS1	YBR165W	PET10	P36139	283 aa		6.54	□□□□□ -1.36
UBS1	YBR165W	ERT1	P38140	529 aa		6.54	□□□□□ -1.36
UBS1	YBR165W	NCS6	P53088	359 aa		6.54	□□□□□ -1.36
UBS1	YBR165W	MCM6	P53091	1017 aa	Known RBP	6.54	□□□□□ -1.36
UBS1	YBR165W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
UBS1	YBR165W	FLC1	Q08967	793 aa		6.54	□□□□□ -1.36
UBS1	YBR165W	YPR071W	Q12346	211 aa		6.54	□□□□□ -1.36
UBS1	YBR165W	NOT3	P06102	836 aa	Known RBP	6.53	□□□□□ -1.36
UBS1	YBR165W	ARE1	P25628	610 aa		6.53	□□□□□ -1.36
UBS1	YBR165W	YBR284W	P38150	797 aa		6.53	□□□□□ -1.36
UBS1	YBR165W	BDF2	Q07442	638 aa		6.53	□□□□□ -1.36
UBS1	YBR165W	KCS1	Q12494	1050 aa		6.53	□□□□□ -1.36
UBS1	YBR165W	STE13	P33894	931 aa		6.52	□□□□□ -1.37
UBS1	YBR165W	EXG2	P52911	562 aa		6.52	□□□□□ -1.37
UBS1	YBR165W	HUL5	P53119	910 aa		6.52	□□□□□ -1.37
UBS1	YBR165W	YGR125W	P53273	1036 aa		6.52	□□□□□ -1.37
UBS1	YBR165W	TAF8	Q03750	510 aa		6.52	□□□□□ -1.37
UBS1	YBR165W	FBP1	P09201	348 aa		6.51	□□□□□ -1.37
UBS1	YBR165W	MSD1	P15179	658 aa	Known RBP	6.51	□□□□□ -1.37
UBS1	YBR165W	IOC3	P43596	787 aa		6.51	□□□□□ -1.37
UBS1	YBR165W	WHI4	Q07655	649 aa	Known RBP	6.51	□□□□□ -1.37
UBS1	YBR165W	UPC2	Q12151	913 aa		6.51	□□□□□ -1.37
UBS1	YBR165W	PMA1	P05030	918 aa	Known RBP	6.5	□□□□□ -1.37
UBS1	YBR165W	HCM1	P25364	564 aa		6.5	□□□□□ -1.37
UBS1	YBR165W	HUL4	P40985	892 aa		6.5	□□□□□ -1.37
UBS1	YBR165W	NSE3	Q05541	303 aa		6.5	□□□□□ -1.37
UBS1	YBR165W	NPC2	Q12408	173 aa		6.5	□□□□□ -1.37
UBS1	YBR165W	TOP3	P13099	656 aa		6.49	□□□□□ -1.37
UBS1	YBR165W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.49	□□□□□ -1.37	not detected
UBS1	YBR165W	UBP6	P43593	499 aa	Known RBP	6.49	□□□□□ -1.37
UBS1	YBR165W	GSF2	Q04697	403 aa	Known RBP	6.49	□□□□□ -1.37
UBS1	YBR165W	NTO1	Q12311	748 aa		6.49	□□□□□ -1.37
UBS1	YBR165W	STE14	P32584	239 aa		6.48	□□□□□ -1.37
UBS1	YBR165W	OCA5	P38738	679 aa		6.48	□□□□□ -1.37
UBS1	YBR165W	GGA2	P38817	585 aa	Known RBP	6.48	□□□□□ -1.37
UBS1	YBR165W	RSP5	P39940	809 aa	Known RBP	6.48	□□□□□ -1.37
UBS1	YBR165W	VPS30	Q02948	557 aa		6.48	□□□□□ -1.37
UBS1	YBR165W	YDL124W	Q07551	312 aa	Known RBP	6.48	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 94.8 ms