RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W SEC5P89102 971 aa3.07□□□□□ -1.92
CAF120YNL278W SRP1Q02821 542 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W PHM6Q05637 104 aa3.07□□□□□ -1.92
CAF120YNL278W ESF1Q06344 628 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W RIX7Q07844 837 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W YLL054CQ12244 843 aa3.07□□□□□ -1.92
CAF120YNL278W MBR1P23493 339 aa3.06□□□□□ -1.92
CAF120YNL278W BRF1P29056 596 aa3.06□□□□□ -1.92
CAF120YNL278W DCW1P36091 449 aa3.06□□□□□ -1.92
CAF120YNL278W GRS1P38088 690 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W KIC1P38692 1080 aa3.06□□□□□ -1.92
CAF120YNL278W CCT3P39077 534 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W MVP1P40959 511 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W SET4P42948 560 aa3.06□□□□□ -1.92
CAF120YNL278W MSB3P48566 633 aaPredicted RBP3.06□□□□□ -1.92
CAF120YNL278W POB3Q04636 552 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W RSC2Q06488 889 aa3.06□□□□□ -1.92
CAF120YNL278W RIM20Q12033 661 aa3.06□□□□□ -1.92
CAF120YNL278W SNF3P10870 884 aa3.06□□□□□ -1.92
CAF120YNL278W RAD27P26793 382 aa3.06□□□□□ -1.92
CAF120YNL278W HIR1P32479 840 aa3.06□□□□□ -1.92
CAF120YNL278W FBP26P32604 452 aa3.06□□□□□ -1.92
CAF120YNL278W YKT6P36015 200 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W SAP190P36123 1033 aa3.06□□□□□ -1.92
CAF120YNL278W CIN4P39110 191 aa3.06□□□□□ -1.92
CAF120YNL278W RSM25P40496 264 aa3.06□□□□□ -1.92
CAF120YNL278W YJR120WP47157 116 aa3.06□□□□□ -1.92
CAF120YNL278W ROM1P53046 1155 aa3.06□□□□□ -1.92
CAF120YNL278W PUS2P53167 370 aa3.06□□□□□ -1.92
CAF120YNL278W RET3P53600 189 aa3.06□□□□□ -1.92
CAF120YNL278W NOP6Q07623 225 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W APC5Q08683 685 aa3.06□□□□□ -1.92
CAF120YNL278W RPS3P05750 240 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W GAL2P13181 574 aa3.06□□□□□ -1.92
CAF120YNL278W RME1P32338 300 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W GCG1P32656 232 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W TIM23P32897 222 aa3.06□□□□□ -1.92
CAF120YNL278W YNG2P38806 282 aaKnown RBP3.06□□□□□ -1.92
CAF120YNL278W NUP82P40368 713 aa3.06□□□□□ -1.92
CAF120YNL278W VID30P53076 958 aa3.06□□□□□ -1.92
CAF120YNL278W HUL5P53119 910 aa3.06□□□□□ -1.92
CAF120YNL278W YGL138CP53122 345 aa3.06□□□□□ -1.92
CAF120YNL278W YMR206WQ03695 313 aa3.06□□□□□ -1.92
CAF120YNL278W CTI6Q08923 506 aa3.06□□□□□ -1.92
CAF120YNL278W LPD1P09624 499 aaKnown RBP3.05□□□□□ -1.92
CAF120YNL278W RPL5P26321 297 aaKnown RBP3.05□□□□□ -1.92
CAF120YNL278W GUT1P32190 709 aa3.05□□□□□ -1.92
CAF120YNL278W SUV3P32580 737 aa3.05□□□□□ -1.92
CAF120YNL278W AFG2P32794 780 aa3.05□□□□□ -1.92
CAF120YNL278W HXT5P38695 592 aa3.05□□□□□ -1.92
CAF120YNL278W UTP18P40362 594 aaPredicted RBP3.05□□□□□ -1.92
CAF120YNL278W BNI4P53858 892 aa3.05□□□□□ -1.92
CAF120YNL278W SPN1Q06505 410 aaPredicted RBP3.05□□□□□ -1.92
CAF120YNL278W AHC1Q12433 566 aa3.05□□□□□ -1.92
CAF120YNL278W YOL087CQ99247 1116 aa3.05□□□□□ -1.92
CAF120YNL278W DPB3P27344 201 aa3.05□□□□□ -1.92
CAF120YNL278W MUD2P36084 527 aaKnown RBP3.05□□□□□ -1.92
CAF120YNL278W GRX7P38068 203 aa3.05□□□□□ -1.92
CAF120YNL278W HAL5P38970 855 aaKnown RBP3.05□□□□□ -1.92
CAF120YNL278W TIM54P47045 478 aa3.05□□□□□ -1.92
CAF120YNL278W EAF7P53911 425 aaKnown RBP3.05□□□□□ -1.92
CAF120YNL278W ULP1Q02724 621 aa3.05□□□□□ -1.92
CAF120YNL278W LCD1Q04377 747 aa3.05□□□□□ -1.92
CAF120YNL278W STI1P15705 589 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
CAF120YNL278W BEM3P32873 1128 aa3.04□□□□□ -1.92
CAF120YNL278W YKL133CP36066 463 aa3.04□□□□□ -1.92
CAF120YNL278W UBX7P38349 436 aa3.04□□□□□ -1.92
CAF120YNL278W ILV3P39522 585 aaKnown RBP3.04□□□□□ -1.92
CAF120YNL278W KTR7P40504 517 aa3.04□□□□□ -1.92
CAF120YNL278W VNX1P42839 908 aa3.04□□□□□ -1.92
CAF120YNL278W BNA1P47096 177 aa3.04□□□□□ -1.92
CAF120YNL278W GPG1P53130 126 aa3.04□□□□□ -1.92
CAF120YNL278W VTI1Q04338 217 aa3.04□□□□□ -1.92
CAF120YNL278W RPB2P08518 1224 aaKnown RBP3.04□□□□□ -1.92
CAF120YNL278W MIP1P15801 1254 aa3.04□□□□□ -1.92
CAF120YNL278W DUT1P33317 147 aa3.04□□□□□ -1.92
CAF120YNL278W NIP100P33420 868 aa3.04□□□□□ -1.92
CAF120YNL278W YKL069WP36088 180 aa3.04□□□□□ -1.92
CAF120YNL278W CTM1P38818 585 aa3.04□□□□□ -1.92
CAF120YNL278W YHR218WP38899 603 aa3.04□□□□□ -1.92
CAF120YNL278W TIF11P38912 153 aaKnown RBP3.04□□□□□ -1.92
CAF120YNL278W YER158CP40095 573 aa3.04□□□□□ -1.92
CAF120YNL278W RSC8P43609 557 aaKnown RBP3.04□□□□□ -1.92
CAF120YNL278W APL6P46682 809 aa3.04□□□□□ -1.92
CAF120YNL278W KEL2P50090 882 aa3.04□□□□□ -1.92
CAF120YNL278W YGR021WP53212 290 aa3.04□□□□□ -1.92
CAF120YNL278W ELA1P53861 379 aaPredicted RBP3.04□□□□□ -1.92
CAF120YNL278W PEX19Q07418 342 aa3.04□□□□□ -1.92
CAF120YNL278W RIO1Q12196 484 aaKnown RBP3.04□□□□□ -1.92
CAF120YNL278W CMP2P14747 604 aa3.04□□□□□ -1.92
CAF120YNL278W IXR1P33417 597 aa3.04□□□□□ -1.92
CAF120YNL278W VID27P40157 782 aa3.04□□□□□ -1.92
CAF120YNL278W SPR3P41901 512 aa3.04□□□□□ -1.92
CAF120YNL278W MRPS35P53292 345 aa3.04□□□□□ -1.92
CAF120YNL278W TIM11P81449 96 aaPredicted RBP3.04□□□□□ -1.92
CAF120YNL278W YOL019WQ08157 551 aa3.04□□□□□ -1.92
CAF120YNL278W RMP1Q12530 201 aa3.04□□□□□ -1.92
CAF120YNL278W CDC31P06704 161 aaKnown RBP3.03□□□□□ -1.92
CAF120YNL278W QDR1P40475 563 aa3.03□□□□□ -1.92
CAF120YNL278W BDP1P46678 594 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms