RNA–Protein interactions for RNA: YNL148C

ALF1, Transcript of Alpha-tubulin folding protein, yeast

Gene ALF1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ALF1	YNL148C	YGR125W	P53273	1036 aa		13.79	□□□□□ -0.2
ALF1	YNL148C	YAP7	Q08182	245 aa		13.79	□□□□□ -0.2
ALF1	YNL148C	CFT2	Q12102	859 aa	Predicted RBP	13.79	□□□□□ -0.2
ALF1	YNL148C	PKC1	P24583	1151 aa		13.78	□□□□□ -0.2
ALF1	YNL148C	UTR4	P32626	227 aa		13.78	□□□□□ -0.2
ALF1	YNL148C	PPS1	P38148	807 aa		13.78	□□□□□ -0.2
ALF1	YNL148C	EFM2	P38347	419 aa		13.78	□□□□□ -0.2
ALF1	YNL148C	BSD2	P38356	321 aa		13.78	□□□□□ -0.2
ALF1	YNL148C	PIH1	P38768	344 aa		13.78	□□□□□ -0.2
ALF1	YNL148C	SPT8	P38915	602 aa		13.78	□□□□□ -0.2
ALF1	YNL148C	HUL4	P40985	892 aa		13.78	□□□□□ -0.2
ALF1	YNL148C	ZPR1	P53303	486 aa	Known RBP	13.78	□□□□□ -0.2
ALF1	YNL148C	TCO89	Q08921	799 aa		13.78	□□□□□ -0.2
ALF1	YNL148C	ESS1	P22696	170 aa		13.77	□□□□□ -0.21
ALF1	YNL148C	RPC53	P25441	422 aa		13.77	□□□□□ -0.21
ALF1	YNL148C	SEC8	P32855	1065 aa		13.77	□□□□□ -0.21
ALF1	YNL148C	MIP6	P38760	659 aa	Known RBP	13.77	□□□□□ -0.21
ALF1	YNL148C	BRE2	P43132	505 aa		13.77	□□□□□ -0.21
ALF1	YNL148C	DUS3	Q06053	668 aa	Known RBP	13.77	□□□□□ -0.21
ALF1	YNL148C	CUR1	Q06469	252 aa		13.77	□□□□□ -0.21
ALF1	YNL148C	PLP2	Q12017	286 aa		13.77	□□□□□ -0.21
ALF1	YNL148C	MED1	Q12321	566 aa		13.77	□□□□□ -0.21
ALF1	YNL148C	RKM4	Q12504	494 aa		13.77	□□□□□ -0.21
ALF1	YNL148C	PCK1	P10963	549 aa		13.76	□□□□□ -0.21
ALF1	YNL148C	TCP1	P12612	559 aa	Known RBP	13.76	□□□□□ -0.21
ALF1	YNL148C	UBP11	P36026	717 aa		13.76	□□□□□ -0.21
ALF1	YNL148C	LEO1	P38439	464 aa		13.76	□□□□□ -0.21
ALF1	YNL148C	HMF1	P40037	129 aa	Known RBP	13.76	□□□□□ -0.21
ALF1	YNL148C	FIS1	P40515	155 aa		13.76	□□□□□ -0.21
ALF1	YNL148C	STR2	P47164	639 aa		13.76	□□□□□ -0.21
ALF1	YNL148C	SUP45	P12385	437 aa	Known RBP	13.75	□□□□□ -0.21
ALF1	YNL148C	SEC65	P29478	273 aa		13.75	□□□□□ -0.21
ALF1	YNL148C	MRF1	P30775	413 aa	Predicted RBP	13.75	□□□□□ -0.21
ALF1	YNL148C	MFT1	P33441	392 aa	Known RBP	13.75	□□□□□ -0.21
ALF1	YNL148C	RPN3	P40016	523 aa	Known RBP	13.75	□□□□□ -0.21
ALF1	YNL148C	ALF1	P53904	254 aa		13.75	□□□□□ -0.21
ALF1	YNL148C	YPL277C	Q08989	487 aa		13.75	□□□□□ -0.21
ALF1	YNL148C	RPS6A	P0CX37	236 aa	Known RBP	13.74	□□□□□ -0.21
ALF1	YNL148C	RPS6B	P0CX38	236 aa	Predicted RBP	13.74	□□□□□ -0.21
ALF1	YNL148C	SSA4	P22202	642 aa	Known RBP	13.74	□□□□□ -0.21
ALF1	YNL148C	CDC60	P26637	1090 aa	Known RBP	13.74	□□□□□ -0.21
ALF1	YNL148C	EUG1	P32474	517 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	MNR2	P35724	969 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	BIM1	P40013	344 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	TOS3	P43637	560 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	DIP5	P53388	608 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	RBA50	Q04418	439 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	YLR287C	Q05881	355 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	CRD1	Q07560	283 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	YOL075C	Q08234	1294 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	HMI1	Q12039	706 aa		13.74	□□□□□ -0.21
ALF1	YNL148C	APL1	P27351	700 aa		13.73	□□□□□ -0.21
ALF1	YNL148C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.73	□□□□□ -0.21	not detected
ALF1	YNL148C	TY3A-G	Q12173	290 aa		13.73	□□□□□ -0.21
ALF1	YNL148C	TY3A-I	Q99219	290 aa		13.73	□□□□□ -0.21
ALF1	YNL148C	HVG1	P0CE11	249 aa		13.72	□□□□□ -0.21
ALF1	YNL148C	TKL1	P23254	680 aa	Known RBP	13.72	□□□□□ -0.21
ALF1	YNL148C	SHM1	P37292	490 aa	Predicted RBP	13.72	□□□□□ -0.21
ALF1	YNL148C	UBP13	P38187	747 aa		13.72	□□□□□ -0.21
ALF1	YNL148C	VFA1	P40080	203 aa		13.72	□□□□□ -0.21
ALF1	YNL148C	NBP1	P52919	319 aa	Predicted RBP	13.72	□□□□□ -0.21
ALF1	YNL148C	VPS38	Q05919	439 aa		13.72	□□□□□ -0.21
ALF1	YNL148C	SPO75	Q07798	868 aa		13.72	□□□□□ -0.21
ALF1	YNL148C	YPL216W	Q08964	1102 aa		13.72	□□□□□ -0.21
ALF1	YNL148C	ATG9	Q12142	997 aa		13.72	□□□□□ -0.21
ALF1	YNL148C	SSB1	P11484	613 aa	Known RBP	13.71	□□□□□ -0.21
ALF1	YNL148C	SHP1	P34223	423 aa		13.71	□□□□□ -0.21
ALF1	YNL148C	VPS29	P38759	282 aa		13.71	□□□□□ -0.21
ALF1	YNL148C	SSB2	P40150	613 aa	Known RBP	13.71	□□□□□ -0.21
ALF1	YNL148C	YDL057W	Q07379	328 aa		13.71	□□□□□ -0.21
ALF1	YNL148C	NEW1	Q08972	1196 aa	Known RBP	13.71	□□□□□ -0.21
ALF1	YNL148C	APL4	Q12028	832 aa		13.71	□□□□□ -0.21
ALF1	YNL148C	VPS35	P34110	944 aa		13.7	□□□□□ -0.22
ALF1	YNL148C	RTT107	P38850	1070 aa		13.7	□□□□□ -0.22
ALF1	YNL148C	SMC3	P47037	1230 aa		13.7	□□□□□ -0.22
ALF1	YNL148C	COS5	P47187	383 aa		13.7	□□□□□ -0.22
ALF1	YNL148C	HFM1	P51979	1187 aa		13.7	□□□□□ -0.22
ALF1	YNL148C	NCS2	P53923	493 aa	Predicted RBP	13.7	□□□□□ -0.22
ALF1	YNL148C	CST9	Q06032	482 aa		13.7	□□□□□ -0.22
ALF1	YNL148C	RRP6	Q12149	733 aa	Known RBP	13.7	□□□□□ -0.22
ALF1	YNL148C	ERP3	Q12403	225 aa		13.7	□□□□□ -0.22
ALF1	YNL148C	PHO8	P11491	566 aa		13.69	□□□□□ -0.22
ALF1	YNL148C	TVP38	P36164	337 aa		13.69	□□□□□ -0.22
ALF1	YNL148C	RSC30	P38781	883 aa		13.69	□□□□□ -0.22
ALF1	YNL148C	CCM1	P48237	864 aa	Predicted RBP	13.69	□□□□□ -0.22
ALF1	YNL148C	UBP15	P50101	1230 aa		13.69	□□□□□ -0.22
ALF1	YNL148C	TOF1	P53840	1238 aa		13.69	□□□□□ -0.22
ALF1	YNL148C	JIP4	Q03361	876 aa		13.69	□□□□□ -0.22
ALF1	YNL148C	UTP5	Q04177	643 aa	Known RBP	13.69	□□□□□ -0.22
ALF1	YNL148C	SVF1	Q05515	481 aa		13.69	□□□□□ -0.22
ALF1	YNL148C	DBP5	P20449	482 aa	Known RBP	13.68	□□□□□ -0.22
ALF1	YNL148C	ATG19	P35193	415 aa		13.68	□□□□□ -0.22
ALF1	YNL148C	RPC25	P35718	212 aa		13.68	□□□□□ -0.22
ALF1	YNL148C	PGM2	P37012	569 aa	Known RBP	13.68	□□□□□ -0.22
ALF1	YNL148C	REG2	P38232	338 aa		13.68	□□□□□ -0.22
ALF1	YNL148C	SMC2	P38989	1170 aa	Known RBP	13.68	□□□□□ -0.22
ALF1	YNL148C	YAP5	P40574	245 aa		13.68	□□□□□ -0.22
ALF1	YNL148C	SPR3	P41901	512 aa		13.68	□□□□□ -0.22
ALF1	YNL148C	ERG5	P54781	538 aa		13.68	□□□□□ -0.22
ALF1	YNL148C	GIR2	Q03768	265 aa	Predicted RBP	13.68	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms