RNA–Protein interactions for RNA: YNL007C

SIS1, Transcript of Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p, yeast

Gene SIS1, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS1	YNL007C	PPS1	P38148	807 aa		13.64	□□□□□ -0.23
SIS1	YNL007C	SIP3	P38717	1229 aa		13.64	□□□□□ -0.23
SIS1	YNL007C	PIH1	P38768	344 aa		13.64	□□□□□ -0.23
SIS1	YNL007C	GUP1	P53154	560 aa		13.64	□□□□□ -0.23
SIS1	YNL007C	PHO13	P19881	312 aa		13.63	□□□□□ -0.23
SIS1	YNL007C	SPC110	P32380	944 aa		13.63	□□□□□ -0.23
SIS1	YNL007C	PGM1	P33401	570 aa	Known RBP	13.63	□□□□□ -0.23
SIS1	YNL007C	STR2	P47164	639 aa		13.63	□□□□□ -0.23
SIS1	YNL007C	ALD6	P54115	500 aa	Known RBP	13.63	□□□□□ -0.23
SIS1	YNL007C	SPH1	Q06160	661 aa		13.63	□□□□□ -0.23
SIS1	YNL007C	RTT107	P38850	1070 aa		13.62	□□□□□ -0.23
SIS1	YNL007C	NUP82	P40368	713 aa		13.62	□□□□□ -0.23
SIS1	YNL007C	STU2	P46675	888 aa		13.62	□□□□□ -0.23
SIS1	YNL007C	VPS62	P53285	467 aa		13.62	□□□□□ -0.23
SIS1	YNL007C	DIP5	P53388	608 aa		13.62	□□□□□ -0.23
SIS1	YNL007C	CNM67	P53865	581 aa	Known RBP	13.62	□□□□□ -0.23
SIS1	YNL007C	FUS2	Q05670	677 aa		13.62	□□□□□ -0.23
SIS1	YNL007C	YLR326W	Q06170	240 aa	Known RBP	13.62	□□□□□ -0.23
SIS1	YNL007C	RPS6A	P0CX37	236 aa	Known RBP	13.61	□□□□□ -0.23
SIS1	YNL007C	RPS6B	P0CX38	236 aa	Predicted RBP	13.61	□□□□□ -0.23
SIS1	YNL007C	PFK1	P16861	987 aa	Known RBP	13.61	□□□□□ -0.23
SIS1	YNL007C	LDH1	P38139	375 aa		13.61	□□□□□ -0.23
SIS1	YNL007C	LEO1	P38439	464 aa		13.61	□□□□□ -0.23
SIS1	YNL007C	BRE2	P43132	505 aa		13.61	□□□□□ -0.23
SIS1	YNL007C	OSW7	P43611	510 aa		13.61	□□□□□ -0.23
SIS1	YNL007C	YCG1	Q06680	1035 aa		13.61	□□□□□ -0.23
SIS1	YNL007C	WHI4	Q07655	649 aa	Known RBP	13.61	□□□□□ -0.23
SIS1	YNL007C	GUD1	Q07729	489 aa		13.61	□□□□□ -0.23
SIS1	YNL007C	YAP7	Q08182	245 aa		13.61	□□□□□ -0.23
SIS1	YNL007C	APL4	Q12028	832 aa		13.61	□□□□□ -0.23
SIS1	YNL007C	SUP45	P12385	437 aa	Known RBP	13.6	□□□□□ -0.23
SIS1	YNL007C	CLN3	P13365	580 aa		13.6	□□□□□ -0.23
SIS1	YNL007C	RPC25	P35718	212 aa		13.6	□□□□□ -0.23
SIS1	YNL007C	YKR018C	P36114	725 aa		13.6	□□□□□ -0.23
SIS1	YNL007C	SHM1	P37292	490 aa	Predicted RBP	13.6	□□□□□ -0.23
SIS1	YNL007C	MIP6	P38760	659 aa	Known RBP	13.6	□□□□□ -0.23
SIS1	YNL007C	ULP2	P40537	1034 aa	Predicted RBP	13.6	□□□□□ -0.23
SIS1	YNL007C	ESS1	P22696	170 aa		13.59	□□□□□ -0.23
SIS1	YNL007C	SHP1	P34223	423 aa		13.59	□□□□□ -0.23
SIS1	YNL007C	UBP11	P36026	717 aa		13.59	□□□□□ -0.23
SIS1	YNL007C	MCR1	P36060	302 aa	Known RBP	13.59	□□□□□ -0.23
SIS1	YNL007C	YFL034W	P43564	1073 aa		13.59	□□□□□ -0.23
SIS1	YNL007C	TOS3	P43637	560 aa		13.59	□□□□□ -0.23
SIS1	YNL007C	CLA4	P48562	842 aa		13.59	□□□□□ -0.23
SIS1	YNL007C	DUS3	Q06053	668 aa	Known RBP	13.59	□□□□□ -0.23
SIS1	YNL007C	TY1B-A	O13527	1196 aa	Known RBP	13.58	□□□□□ -0.24
SIS1	YNL007C	SRD1	P09007	221 aa		13.58	□□□□□ -0.24
SIS1	YNL007C	VMA2	P16140	517 aa	Known RBP	13.58	□□□□□ -0.24
SIS1	YNL007C	SPO11	P23179	398 aa		13.58	□□□□□ -0.24
SIS1	YNL007C	UTR4	P32626	227 aa		13.58	□□□□□ -0.24
SIS1	YNL007C	PXL1	P36166	706 aa		13.58	□□□□□ -0.24
SIS1	YNL007C	GPD2	P41911	440 aa	Known RBP	13.58	□□□□□ -0.24
SIS1	YNL007C	SEC5	P89102	971 aa		13.58	□□□□□ -0.24
SIS1	YNL007C	ATG9	Q12142	997 aa		13.58	□□□□□ -0.24
SIS1	YNL007C	FKS1	P38631	1876 aa	Known RBP	13.58	□□□□□ -0.24
SIS1	YNL007C	PGK1	P00560	416 aa	Known RBP	13.57	□□□□□ -0.24
SIS1	YNL007C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.57	□□□□□ -0.24	not detected
SIS1	YNL007C	HUL5	P53119	910 aa		13.57	□□□□□ -0.24
SIS1	YNL007C	PTA1	Q01329	785 aa	Predicted RBP	13.57	□□□□□ -0.24
SIS1	YNL007C	PHM6	Q05637	104 aa		13.57	□□□□□ -0.24
SIS1	YNL007C	SPO75	Q07798	868 aa		13.57	□□□□□ -0.24
SIS1	YNL007C	RRP43	P25359	394 aa	Predicted RBP	13.56	□□□□□ -0.24
SIS1	YNL007C	CLB5	P30283	435 aa		13.56	□□□□□ -0.24
SIS1	YNL007C	SUV3	P32580	737 aa		13.56	□□□□□ -0.24
SIS1	YNL007C	PCH2	P38126	564 aa		13.56	□□□□□ -0.24
SIS1	YNL007C	BIM1	P40013	344 aa		13.56	□□□□□ -0.24
SIS1	YNL007C	RPN3	P40016	523 aa	Known RBP	13.56	□□□□□ -0.24
SIS1	YNL007C	HUL4	P40985	892 aa		13.56	□□□□□ -0.24
SIS1	YNL007C	CTR1	P49573	406 aa		13.56	□□□□□ -0.24
SIS1	YNL007C	YGL039W	P53183	348 aa	Known RBP	13.56	□□□□□ -0.24
SIS1	YNL007C	SVF1	Q05515	481 aa		13.56	□□□□□ -0.24
SIS1	YNL007C	YLR287C	Q05881	355 aa		13.56	□□□□□ -0.24
SIS1	YNL007C	YDL057W	Q07379	328 aa		13.56	□□□□□ -0.24
SIS1	YNL007C	RRP6	Q12149	733 aa	Known RBP	13.56	□□□□□ -0.24
SIS1	YNL007C	RPC53	P25441	422 aa		13.55	□□□□□ -0.24
SIS1	YNL007C	CRD1	Q07560	283 aa		13.55	□□□□□ -0.24
SIS1	YNL007C	MAK16	P10962	306 aa	Predicted RBP	13.54	□□□□□ -0.24
SIS1	YNL007C	DAL7	P21826	554 aa		13.54	□□□□□ -0.24
SIS1	YNL007C	EFM2	P38347	419 aa		13.54	□□□□□ -0.24
SIS1	YNL007C	GPB2	P39717	880 aa		13.54	□□□□□ -0.24
SIS1	YNL007C	NBP1	P52919	319 aa	Predicted RBP	13.54	□□□□□ -0.24
SIS1	YNL007C	YAF9	P53930	226 aa		13.54	□□□□□ -0.24
SIS1	YNL007C	YVH1	Q02256	364 aa	Known RBP	13.54	□□□□□ -0.24
SIS1	YNL007C	COG4	Q06096	861 aa		13.54	□□□□□ -0.24
SIS1	YNL007C	ISA1	Q07821	250 aa	Predicted RBP	13.54	□□□□□ -0.24
SIS1	YNL007C	TCO89	Q08921	799 aa		13.54	□□□□□ -0.24
SIS1	YNL007C	CWC2	Q12046	339 aa	Predicted RBP	13.54	□□□□□ -0.24
SIS1	YNL007C	PRP22	P24384	1145 aa	Known RBP	13.53	□□□□□ -0.24
SIS1	YNL007C	MRF1	P30775	413 aa	Predicted RBP	13.53	□□□□□ -0.24
SIS1	YNL007C	FIS1	P40515	155 aa		13.53	□□□□□ -0.24
SIS1	YNL007C	ZPR1	P53303	486 aa	Known RBP	13.53	□□□□□ -0.24
SIS1	YNL007C	TOF1	P53840	1238 aa		13.53	□□□□□ -0.24
SIS1	YNL007C	VPS38	Q05919	439 aa		13.53	□□□□□ -0.24
SIS1	YNL007C	YPL277C	Q08989	487 aa		13.53	□□□□□ -0.24
SIS1	YNL007C	ICL2	Q12031	575 aa		13.53	□□□□□ -0.24
SIS1	YNL007C	HMI1	Q12039	706 aa		13.53	□□□□□ -0.24
SIS1	YNL007C	YOR131C	Q12486	218 aa		13.53	□□□□□ -0.24
SIS1	YNL007C	CDC19	P00549	500 aa	Known RBP	13.52	□□□□□ -0.25
SIS1	YNL007C	PKC1	P24583	1151 aa		13.52	□□□□□ -0.25
SIS1	YNL007C	EUG1	P32474	517 aa		13.52	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms