RNA–Protein interactions for RNA: YMR161W

HLJ1, Transcript of Co-chaperone for Hsp40p, yeastyeast

Gene HLJ1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HLJ1YMR161W SPO19Q03029 223 aa5.39□□□□□ -1.55
HLJ1YMR161W YML119WQ03208 357 aa5.39□□□□□ -1.55
HLJ1YMR161W CEF1Q03654 590 aaPredicted RBP5.39□□□□□ -1.55
HLJ1YMR161W TSR1Q07381 788 aaKnown RBP5.39□□□□□ -1.55
HLJ1YMR161W PSR1Q07800 427 aa5.39□□□□□ -1.55
HLJ1YMR161W APC5Q08683 685 aa5.39□□□□□ -1.55
HLJ1YMR161W YRM1Q12340 786 aa5.39□□□□□ -1.55
HLJ1YMR161W MRP10O75012 95 aa5.38□□□□□ -1.55
HLJ1YMR161W FAR1P21268 830 aa5.38□□□□□ -1.55
HLJ1YMR161W MRC1P25588 1096 aa5.38□□□□□ -1.55
HLJ1YMR161W TYS1P36421 394 aaKnown RBP5.38□□□□□ -1.55
HLJ1YMR161W VPS41P38959 992 aa5.38□□□□□ -1.55
HLJ1YMR161W LSG1P53145 640 aaKnown RBP5.38□□□□□ -1.55
HLJ1YMR161W ASI1P54074 624 aa5.38□□□□□ -1.55
HLJ1YMR161W GIR2Q03768 265 aaPredicted RBP5.38□□□□□ -1.55
HLJ1YMR161W UBX2Q04228 584 aa5.38□□□□□ -1.55
HLJ1YMR161W IDI1P15496 288 aa5.37□□□□□ -1.55
HLJ1YMR161W VAN1P23642 535 aa5.37□□□□□ -1.55
HLJ1YMR161W NAB2P32505 525 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
HLJ1YMR161W STE5P32917 917 aa5.37□□□□□ -1.55
HLJ1YMR161W HSM3P38348 480 aa5.37□□□□□ -1.55
HLJ1YMR161W RRM3P38766 723 aa5.37□□□□□ -1.55
HLJ1YMR161W ERC1P38767 581 aa5.37□□□□□ -1.55
HLJ1YMR161W ATG36P46983 293 aa5.37□□□□□ -1.55
HLJ1YMR161W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
HLJ1YMR161W ARO80Q04052 950 aa5.37□□□□□ -1.55
HLJ1YMR161W POB3Q04636 552 aaKnown RBP5.37□□□□□ -1.55
HLJ1YMR161W ABP140Q08641 628 aaKnown RBP5.37□□□□□ -1.55
HLJ1YMR161W YLR122CQ12312 125 aa5.37□□□□□ -1.55
HLJ1YMR161W CDC37P06101 506 aaKnown RBP5.36□□□□□ -1.55
HLJ1YMR161W PET494P07390 489 aaPredicted RBP5.36□□□□□ -1.55
HLJ1YMR161W SUV3P32580 737 aa5.36□□□□□ -1.55
HLJ1YMR161W RFC1P38630 861 aaKnown RBP5.36□□□□□ -1.55
HLJ1YMR161W YLF2P38746 405 aa5.36□□□□□ -1.55
HLJ1YMR161W UBP12P39538 1254 aa5.36□□□□□ -1.55
HLJ1YMR161W SPC72P39723 622 aa5.36□□□□□ -1.55
HLJ1YMR161W SIT1P39980 628 aa5.36□□□□□ -1.55
HLJ1YMR161W YIR042CP40586 236 aa5.36□□□□□ -1.55
HLJ1YMR161W ENP2P48234 707 aaKnown RBP5.36□□□□□ -1.55
HLJ1YMR161W DSL1P53847 754 aa5.36□□□□□ -1.55
HLJ1YMR161W CAB1Q04430 367 aa5.36□□□□□ -1.55
HLJ1YMR161W RRP9Q06506 573 aaKnown RBP5.36□□□□□ -1.55
HLJ1YMR161W CEX1Q12453 761 aa5.36□□□□□ -1.55
HLJ1YMR161W NUP145P49687 1317 aa5.36□□□□□ -1.55
HLJ1YMR161W RTC1Q08281 1341 aa5.35□□□□□ -1.55
HLJ1YMR161W GAL11P19659 1081 aa5.35□□□□□ -1.55
HLJ1YMR161W CDC48P25694 835 aaKnown RBP5.35□□□□□ -1.55
HLJ1YMR161W MET4P32389 672 aa5.35□□□□□ -1.55
HLJ1YMR161W PUB1P32588 453 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55 RIP-Chip
HLJ1YMR161W LIP5P32875 414 aa5.35□□□□□ -1.55
HLJ1YMR161W PEX5P35056 612 aa5.35□□□□□ -1.55
HLJ1YMR161W RRP1P35178 278 aaPredicted RBP5.35□□□□□ -1.55
HLJ1YMR161W TGL4P36165 910 aa5.35□□□□□ -1.55
HLJ1YMR161W TOS1P38288 455 aa5.35□□□□□ -1.55
HLJ1YMR161W EFM2P38347 419 aa5.35□□□□□ -1.55
HLJ1YMR161W NOC2P39744 710 aaKnown RBP5.35□□□□□ -1.55
HLJ1YMR161W YER156CP40093 338 aaKnown RBP5.35□□□□□ -1.55
HLJ1YMR161W MET18P40469 1032 aa5.35□□□□□ -1.55
HLJ1YMR161W RPN11P43588 306 aaKnown RBP5.35□□□□□ -1.55
HLJ1YMR161W IOC3P43596 787 aa5.35□□□□□ -1.55
HLJ1YMR161W DNL4Q08387 944 aaPredicted RBP5.35□□□□□ -1.55
HLJ1YMR161W CHS5Q12114 671 aaKnown RBP5.35□□□□□ -1.55
HLJ1YMR161W TY4A-HQ6Q5P6 413 aa5.35□□□□□ -1.55
HLJ1YMR161W OPI1P21957 404 aa5.34□□□□□ -1.55
HLJ1YMR161W HSP104P31539 908 aaKnown RBP5.34□□□□□ -1.55
HLJ1YMR161W SFA1P32771 386 aa5.34□□□□□ -1.55
HLJ1YMR161W SSO1P32867 290 aa5.34□□□□□ -1.55
HLJ1YMR161W ARC19P33204 171 aaKnown RBP5.34□□□□□ -1.55
HLJ1YMR161W MIC60P36112 540 aa5.34□□□□□ -1.55
HLJ1YMR161W NMD3P38861 518 aaKnown RBP5.34□□□□□ -1.55
HLJ1YMR161W CWH41P53008 833 aa5.34□□□□□ -1.55
HLJ1YMR161W FMP30Q02883 468 aa5.34□□□□□ -1.55
HLJ1YMR161W FUS2Q05670 677 aa5.34□□□□□ -1.55
HLJ1YMR161W CLP1Q08685 445 aaPredicted RBP5.34□□□□□ -1.55
HLJ1YMR161W TRS33Q99394 268 aa5.34□□□□□ -1.55
HLJ1YMR161W RAV1P47104 1357 aa5.33□□□□□ -1.56
HLJ1YMR161W MRPL33P20084 86 aa5.33□□□□□ -1.56
HLJ1YMR161W RPB4P20433 221 aaPredicted RBP5.33□□□□□ -1.56
HLJ1YMR161W VMA3P25515 160 aa5.33□□□□□ -1.56
HLJ1YMR161W YEL1P34225 687 aa5.33□□□□□ -1.56
HLJ1YMR161W MRP8P35719 219 aa5.33□□□□□ -1.56
HLJ1YMR161W MPE1P35728 441 aaKnown RBP5.33□□□□□ -1.56
HLJ1YMR161W TTI1P36097 1038 aa5.33□□□□□ -1.56
HLJ1YMR161W KAE1P36132 386 aa5.33□□□□□ -1.56
HLJ1YMR161W MRPL40P36534 297 aa5.33□□□□□ -1.56
HLJ1YMR161W YRO2P38079 344 aa5.33□□□□□ -1.56
HLJ1YMR161W UTP18P40362 594 aaPredicted RBP5.33□□□□□ -1.56
HLJ1YMR161W BUD27P43573 796 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
HLJ1YMR161W LYS4P49367 693 aaPredicted RBP5.33□□□□□ -1.56
HLJ1YMR161W FAR11P53917 953 aa5.33□□□□□ -1.56
HLJ1YMR161W ECM23Q02710 187 aa5.33□□□□□ -1.56
HLJ1YMR161W RSM28Q03430 361 aa5.33□□□□□ -1.56
HLJ1YMR161W YML108WQ03759 105 aa5.33□□□□□ -1.56
HLJ1YMR161W VMS1Q04311 632 aaKnown RBP5.33□□□□□ -1.56
HLJ1YMR161W YOR296WQ08748 1289 aa5.33□□□□□ -1.56
HLJ1YMR161W YRF1-2P40105 1681 aa5.32□□□□□ -1.56
HLJ1YMR161W SEC15P22224 910 aa5.32□□□□□ -1.56
HLJ1YMR161W PUF4P25339 888 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56 RIP-Chip
HLJ1YMR161W MCM2P29469 868 aa5.32□□□□□ -1.56
HLJ1YMR161W COQ2P32378 372 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms