RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W YPT11P48559 417 aa4.33□□□□□ -1.72
USA1YML029W KRE33P53914 1056 aaKnown RBP4.33□□□□□ -1.72
USA1YML029W SLD5Q03406 294 aa4.33□□□□□ -1.72
USA1YML029W GIS4Q04233 774 aa4.33□□□□□ -1.72
USA1YML029W DUS3Q06053 668 aaKnown RBP4.33□□□□□ -1.72
USA1YML029W DUS4Q06063 367 aa4.33□□□□□ -1.72
USA1YML029W WHI4Q07655 649 aaKnown RBP4.33□□□□□ -1.72
USA1YML029W APC11Q12157 165 aa4.33□□□□□ -1.72
USA1YML029W SRD1P09007 221 aa4.32□□□□□ -1.72
USA1YML029W POX1P13711 748 aa4.32□□□□□ -1.72
USA1YML029W CLC1P17891 233 aa4.32□□□□□ -1.72
USA1YML029W PRP22P24384 1145 aaKnown RBP4.32□□□□□ -1.72
USA1YML029W RPN12P32496 274 aa4.32□□□□□ -1.72
USA1YML029W PAH1P32567 862 aa4.32□□□□□ -1.72
USA1YML029W EBP2P36049 427 aaKnown RBP4.32□□□□□ -1.72
USA1YML029W VID30P53076 958 aa4.32□□□□□ -1.72
USA1YML029W CWC22P53333 577 aaKnown RBP4.32□□□□□ -1.72
USA1YML029W ULP1Q02724 621 aa4.32□□□□□ -1.72
USA1YML029W SMD2Q06217 110 aaKnown RBP4.32□□□□□ -1.72
USA1YML029W MMR1Q06324 491 aa4.32□□□□□ -1.72
USA1YML029W NOB1Q08444 459 aaKnown RBP4.32□□□□□ -1.72
USA1YML029W PCK1P10963 549 aa4.32□□□□□ -1.72
USA1YML029W RGP1P16664 663 aa4.32□□□□□ -1.72
USA1YML029W GSY1P23337 708 aa4.32□□□□□ -1.72
USA1YML029W HIR1P32479 840 aa4.32□□□□□ -1.72
USA1YML029W LDH1P38139 375 aa4.32□□□□□ -1.72
USA1YML029W CUS1Q02554 436 aaPredicted RBP4.32□□□□□ -1.72
USA1YML029W TRS120Q04183 1289 aa4.32□□□□□ -1.72
USA1YML029W SUE1Q06524 206 aa4.32□□□□□ -1.72
USA1YML029W SMC5Q08204 1093 aa4.32□□□□□ -1.72
USA1YML029W SUT2Q12286 268 aa4.32□□□□□ -1.72
USA1YML029W HIF1Q12373 385 aa4.32□□□□□ -1.72
USA1YML029W CLN3P13365 580 aa4.31□□□□□ -1.72
USA1YML029W UBC1P21734 215 aaKnown RBP4.31□□□□□ -1.72
USA1YML029W URA1P28272 314 aaPredicted RBP4.31□□□□□ -1.72
USA1YML029W DPH2P32461 534 aa4.31□□□□□ -1.72
USA1YML029W DID4P36108 232 aa4.31□□□□□ -1.72
USA1YML029W BRL1P38770 471 aa4.31□□□□□ -1.72
USA1YML029W UBP15P50101 1230 aa4.31□□□□□ -1.72
USA1YML029W SHE10P53075 577 aa4.31□□□□□ -1.72
USA1YML029W YDR090CQ03193 310 aa4.31□□□□□ -1.72
USA1YML029W EAR1Q03212 550 aa4.31□□□□□ -1.72
USA1YML029W YLL058WQ12198 575 aa4.31□□□□□ -1.72
USA1YML029W LDB19Q12502 818 aa4.31□□□□□ -1.72
USA1YML029W PTC5Q12511 572 aa4.31□□□□□ -1.72
USA1YML029W PDC1P06169 563 aaKnown RBP4.31□□□□□ -1.72
USA1YML029W EFT1P32324 842 aaKnown RBP4.31□□□□□ -1.72
USA1YML029W UBP11P36026 717 aa4.31□□□□□ -1.72
USA1YML029W BCD1P38772 366 aa4.31□□□□□ -1.72
USA1YML029W CIT3P43635 486 aa4.31□□□□□ -1.72
USA1YML029W VPS62P53285 467 aa4.31□□□□□ -1.72
USA1YML029W SDA1P53313 767 aaKnown RBP4.31□□□□□ -1.72
USA1YML029W EIS1Q05050 843 aaKnown RBP4.31□□□□□ -1.72
USA1YML029W RTP1Q12751 981 aa4.31□□□□□ -1.72
USA1YML029W MAK16P10962 306 aaPredicted RBP4.3□□□□□ -1.72
USA1YML029W MRPL32P25348 183 aa4.3□□□□□ -1.72
USA1YML029W YUR1P26725 428 aa4.3□□□□□ -1.72
USA1YML029W KNS1P32350 737 aaPredicted RBP4.3□□□□□ -1.72
USA1YML029W POA1P38218 177 aa4.3□□□□□ -1.72
USA1YML029W UBA2P52488 636 aa4.3□□□□□ -1.72
USA1YML029W CBK1P53894 756 aa4.3□□□□□ -1.72
USA1YML029W ROD1Q02805 837 aa4.3□□□□□ -1.72
USA1YML029W YPL034WQ03083 165 aa4.3□□□□□ -1.72
USA1YML029W HIS4P00815 799 aaKnown RBP4.3□□□□□ -1.72
USA1YML029W GPA1P08539 472 aa4.3□□□□□ -1.72
USA1YML029W TIF1P10081 395 aaKnown RBP4.3□□□□□ -1.72
USA1YML029W YAP1801P38856 637 aa4.3□□□□□ -1.72
USA1YML029W NOC2P39744 710 aaKnown RBP4.3□□□□□ -1.72
USA1YML029W ISM1P48526 1002 aa4.3□□□□□ -1.72
USA1YML029W DAK1P54838 584 aaKnown RBP4.3□□□□□ -1.72
USA1YML029W MSC2Q03455 724 aa4.3□□□□□ -1.72
USA1YML029W YMR321CQ04898 105 aa4.3□□□□□ -1.72
USA1YML029W CRD1Q07560 283 aa4.3□□□□□ -1.72
USA1YML029W ECM29P38737 1868 aa4.3□□□□□ -1.72
USA1YML029W ILV1P00927 576 aaKnown RBP4.29□□□□□ -1.72
USA1YML029W MIP1P15801 1254 aa4.29□□□□□ -1.72
USA1YML029W FUB1P25659 250 aa4.29□□□□□ -1.72
USA1YML029W COT1P32798 439 aa4.29□□□□□ -1.72
USA1YML029W STS1P38637 319 aa4.29□□□□□ -1.72
USA1YML029W NPR3P38742 1146 aa4.29□□□□□ -1.72
USA1YML029W NDT80P38830 627 aa4.29□□□□□ -1.72
USA1YML029W YER130CP39959 443 aa4.29□□□□□ -1.72
USA1YML029W TFG2P41896 400 aaPredicted RBP4.29□□□□□ -1.72
USA1YML029W YGR035CP53222 116 aa4.29□□□□□ -1.72
USA1YML029W YGR130CP53278 816 aa4.29□□□□□ -1.72
USA1YML029W CAF130P53280 1122 aaPredicted RBP4.29□□□□□ -1.72
USA1YML029W ECM7Q06200 448 aa4.29□□□□□ -1.72
USA1YML029W YOR131CQ12486 218 aa4.29□□□□□ -1.72
USA1YML029W TRS33Q99394 268 aa4.29□□□□□ -1.72
USA1YML029W ESS1P22696 170 aa4.29□□□□□ -1.72
USA1YML029W DBP1P24784 617 aaKnown RBP4.29□□□□□ -1.72
USA1YML029W KIN82P25341 720 aa4.29□□□□□ -1.72
USA1YML029W RPC53P25441 422 aa4.29□□□□□ -1.72
USA1YML029W RRN6P32786 894 aa4.29□□□□□ -1.72
USA1YML029W BCS1P32839 456 aa4.29□□□□□ -1.72
USA1YML029W UBP13P38187 747 aa4.29□□□□□ -1.72
USA1YML029W RKM3P38222 552 aa4.29□□□□□ -1.72
USA1YML029W SIP3P38717 1229 aa4.29□□□□□ -1.72
USA1YML029W ALD5P40047 520 aaKnown RBP4.29□□□□□ -1.72
USA1YML029W SKP2P42843 763 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms