RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W SRP54P20424 541 aaKnown RBP6.17□□□□□ -1.42
LDB18YLL049W RAD54P32863 898 aa6.17□□□□□ -1.42
LDB18YLL049W DRE2P36152 348 aa6.17□□□□□ -1.42
LDB18YLL049W ECM21P38167 1117 aaKnown RBP6.17□□□□□ -1.42
LDB18YLL049W APM2P38700 605 aa6.17□□□□□ -1.42
LDB18YLL049W ARH1P48360 493 aa6.17□□□□□ -1.42
LDB18YLL049W MUK1Q02866 612 aa6.17□□□□□ -1.42
LDB18YLL049W VIP1Q06685 1146 aaKnown RBP6.17□□□□□ -1.42
LDB18YLL049W PUP3P25451 205 aaKnown RBP6.16□□□□□ -1.42
LDB18YLL049W RPL8BP29453 256 aaKnown RBP6.16□□□□□ -1.42
LDB18YLL049W TVP38P36164 337 aa6.16□□□□□ -1.42
LDB18YLL049W OSH3P38713 996 aaKnown RBP6.16□□□□□ -1.42
LDB18YLL049W RRP8P38961 392 aaKnown RBP6.16□□□□□ -1.42
LDB18YLL049W CCC2P38995 1004 aa6.16□□□□□ -1.42
LDB18YLL049W VPS27P40343 622 aaKnown RBP6.16□□□□□ -1.42
LDB18YLL049W MOB1P40484 314 aa6.16□□□□□ -1.42
LDB18YLL049W LSB1P53281 241 aa6.16□□□□□ -1.42
LDB18YLL049W RPT6Q01939 405 aaKnown RBP6.16□□□□□ -1.42
LDB18YLL049W MFB1Q04922 465 aa6.16□□□□□ -1.42
LDB18YLL049W RRD2Q12461 358 aa6.16□□□□□ -1.42
LDB18YLL049W SNF1P06782 633 aaKnown RBP6.15□□□□□ -1.42
LDB18YLL049W APE1P14904 514 aa6.15□□□□□ -1.42
LDB18YLL049W UBC1P21734 215 aaKnown RBP6.15□□□□□ -1.42
LDB18YLL049W HCM1P25364 564 aa6.15□□□□□ -1.42
LDB18YLL049W ADK2P26364 225 aa6.15□□□□□ -1.42
LDB18YLL049W ANP1P32629 500 aa6.15□□□□□ -1.42
LDB18YLL049W HMF1P40037 129 aaKnown RBP6.15□□□□□ -1.42
LDB18YLL049W MMF1P40185 145 aaKnown RBP6.15□□□□□ -1.42
LDB18YLL049W GCV2P49095 1034 aa6.15□□□□□ -1.42
LDB18YLL049W UFD2P54860 961 aa6.15□□□□□ -1.42
LDB18YLL049W CLF1Q12309 687 aaPredicted RBP6.15□□□□□ -1.42
LDB18YLL049W PDR18P53756 1333 aa6.15□□□□□ -1.43
LDB18YLL049W KEX1P09620 729 aa6.14□□□□□ -1.43
LDB18YLL049W BIM1P40013 344 aa6.14□□□□□ -1.43
LDB18YLL049W PSP2P50109 593 aaKnown RBP6.14□□□□□ -1.43
LDB18YLL049W MYO5Q04439 1219 aaKnown RBP6.14□□□□□ -1.43
LDB18YLL049W PIN2Q12057 282 aa6.14□□□□□ -1.43
LDB18YLL049W TRP2P00899 507 aaKnown RBP6.13□□□□□ -1.43
LDB18YLL049W OPI1P21957 404 aa6.13□□□□□ -1.43
LDB18YLL049W MET1P36150 593 aa6.13□□□□□ -1.43
LDB18YLL049W MRPL7P36519 292 aa6.13□□□□□ -1.43
LDB18YLL049W SOL3P38858 249 aa6.13□□□□□ -1.43
LDB18YLL049W YEL025CP39991 1188 aa6.13□□□□□ -1.43
LDB18YLL049W MRPS35P53292 345 aa6.13□□□□□ -1.43
LDB18YLL049W WHI4Q07655 649 aaKnown RBP6.13□□□□□ -1.43
LDB18YLL049W PAN5P38787 379 aa6.12□□□□□ -1.43
LDB18YLL049W PEX28P38848 579 aa6.12□□□□□ -1.43
LDB18YLL049W MDM1Q01846 1127 aa6.12□□□□□ -1.43
LDB18YLL049W GPI13Q07830 1017 aa6.12□□□□□ -1.43
LDB18YLL049W SEC20P28791 383 aa6.11□□□□□ -1.43
LDB18YLL049W SEG2P34250 1132 aa6.11□□□□□ -1.43
LDB18YLL049W UBX7P38349 436 aa6.11□□□□□ -1.43
LDB18YLL049W YHL026CP38740 315 aa6.11□□□□□ -1.43
LDB18YLL049W RIM4P38741 713 aa6.11□□□□□ -1.43
LDB18YLL049W ORC6P38826 435 aa6.11□□□□□ -1.43
LDB18YLL049W ATG32P40458 529 aa6.11□□□□□ -1.43
LDB18YLL049W YIR016WP40572 265 aa6.11□□□□□ -1.43
LDB18YLL049W MAF1P41910 395 aa6.11□□□□□ -1.43
LDB18YLL049W MDR1P53258 950 aa6.11□□□□□ -1.43
LDB18YLL049W CAF120P53836 1060 aa6.11□□□□□ -1.43
LDB18YLL049W MAK31P23059 88 aa6.1□□□□□ -1.43
LDB18YLL049W KTR1P27810 393 aaKnown RBP6.1□□□□□ -1.43
LDB18YLL049W CLB5P30283 435 aa6.1□□□□□ -1.43
LDB18YLL049W SEC21P32074 935 aaKnown RBP6.1□□□□□ -1.43
LDB18YLL049W BUD2P33314 1104 aa6.1□□□□□ -1.43
LDB18YLL049W GCS1P35197 352 aa6.1□□□□□ -1.43
LDB18YLL049W SPT23P35210 1082 aa6.1□□□□□ -1.43
LDB18YLL049W UBP11P36026 717 aa6.1□□□□□ -1.43
LDB18YLL049W YAP1801P38856 637 aa6.1□□□□□ -1.43
LDB18YLL049W ESL1P40456 1118 aa6.1□□□□□ -1.43
LDB18YLL049W DSE3Q08729 430 aa6.1□□□□□ -1.43
LDB18YLL049W ARP6Q12509 438 aa6.1□□□□□ -1.43
LDB18YLL049W RPL8AP17076 256 aaKnown RBP6.09□□□□□ -1.43
LDB18YLL049W PEX1P24004 1043 aa6.09□□□□□ -1.43
LDB18YLL049W SLX8P40072 274 aa6.09□□□□□ -1.43
LDB18YLL049W CSM2P40465 213 aa6.09□□□□□ -1.43
LDB18YLL049W CIT3P43635 486 aa6.09□□□□□ -1.43
LDB18YLL049W GDE1Q02979 1223 aa6.09□□□□□ -1.43
LDB18YLL049W YLR257WQ06146 321 aaKnown RBP6.09□□□□□ -1.43
LDB18YLL049W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
LDB18YLL049W RVB2Q12464 471 aaKnown RBP6.09□□□□□ -1.43
LDB18YLL049W PCD1Q12524 340 aa6.09□□□□□ -1.43
LDB18YLL049W HIS5P07172 385 aa6.08□□□□□ -1.44
LDB18YLL049W DID4P36108 232 aa6.08□□□□□ -1.44
LDB18YLL049W RFC1P38630 861 aaKnown RBP6.08□□□□□ -1.44
LDB18YLL049W YHR202WP38887 602 aa6.08□□□□□ -1.44
LDB18YLL049W PEX19Q07418 342 aa6.08□□□□□ -1.44
LDB18YLL049W CDC45Q08032 650 aa6.08□□□□□ -1.44
LDB18YLL049W AI4P03878 556 aa6.07□□□□□ -1.44
LDB18YLL049W RAM1P22007 431 aa6.07□□□□□ -1.44
LDB18YLL049W RPL34BP40525 121 aaKnown RBP6.07□□□□□ -1.44
LDB18YLL049W ASE1P50275 885 aa6.07□□□□□ -1.44
LDB18YLL049W HUL5P53119 910 aa6.07□□□□□ -1.44
LDB18YLL049W YNL134CP53912 376 aaKnown RBP6.07□□□□□ -1.44
LDB18YLL049W YML053CQ04978 212 aa6.07□□□□□ -1.44
LDB18YLL049W MRI1Q06489 411 aaKnown RBP6.07□□□□□ -1.44
LDB18YLL049W BRE1Q07457 700 aaKnown RBP6.07□□□□□ -1.44
LDB18YLL049W SSF2Q12153 453 aaPredicted RBP6.07□□□□□ -1.44
LDB18YLL049W MNL2Q12205 849 aa6.07□□□□□ -1.44
LDB18YLL049W MSB2P32334 1306 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms