RNA–Protein interactions for RNA: YGR027W-B

YGR027W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR027W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR027W-BYGR027W-B NUP133P36161 1157 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B TBS1P38114 1094 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B APM3P38153 483 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B YBR287WP38355 427 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B SMF1P38925 575 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B INP52P50942 1183 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B SLX4Q12098 748 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B NUP188P52593 1655 aaKnown RBP3.92□□□□□ -1.78
YGR027W-BYGR027W-B PRT1P06103 763 aaKnown RBP3.92□□□□□ -1.78
YGR027W-BYGR027W-B STE11P23561 717 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B YKL050CP35736 922 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B PBY1P38254 753 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B RTR1P40084 226 aaPredicted RBP3.92□□□□□ -1.78
YGR027W-BYGR027W-B NNF1P47149 201 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B APL5Q08951 932 aaKnown RBP3.92□□□□□ -1.78
YGR027W-BYGR027W-B TSR3Q12094 313 aaKnown RBP3.92□□□□□ -1.78
YGR027W-BYGR027W-B MPD2Q99316 277 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B NOT3P06102 836 aaKnown RBP3.92□□□□□ -1.78
YGR027W-BYGR027W-B GPI10P30777 616 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B CYM1P32898 989 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B AKL1P38080 1108 aaKnown RBP3.92□□□□□ -1.78
YGR027W-BYGR027W-B TPO2P53283 614 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B STP1Q00947 519 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B ARP7Q12406 477 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B ASG1P40467 964 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B BNI4P53858 892 aa3.92□□□□□ -1.78
YGR027W-BYGR027W-B YOR097CQ12274 175 aaPredicted RBP3.92□□□□□ -1.78
YGR027W-BYGR027W-B SUV3P32580 737 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B SPC97P38863 823 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B GAD1Q04792 585 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B CSC1Q06538 782 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B DIS3Q08162 1001 aaKnown RBP3.91□□□□□ -1.78
YGR027W-BYGR027W-B YRF1-2P40105 1681 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B MSS51P32335 436 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B TFB1P32776 642 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B STN1P38960 494 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B YEL020CP39994 560 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B GDE1Q02979 1223 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B RGA2Q06407 1009 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B YOL098CQ12496 1037 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B CYT1P07143 309 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B CDC27P38042 758 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B RAD26P40352 1085 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B PMT3P47190 753 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B PRC1P00729 532 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B WHI2P12611 486 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B RAD27P26793 382 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B CMK1P27466 446 aaKnown RBP3.91□□□□□ -1.78
YGR027W-BYGR027W-B CCL1P37366 393 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B SAP185P40856 1058 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B ASK10P48361 1146 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B YML037CQ03703 340 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B YLR455WQ06188 304 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B PSY3Q12318 242 aa3.91□□□□□ -1.78
YGR027W-BYGR027W-B MTF2P10849 440 aa3.9□□□□□ -1.78
YGR027W-BYGR027W-B PCK1P10963 549 aa3.9□□□□□ -1.78
YGR027W-BYGR027W-B SGE1P33335 543 aa3.9□□□□□ -1.78
YGR027W-BYGR027W-B SEA4P38164 1038 aa3.9□□□□□ -1.78
YGR027W-BYGR027W-B YNG2P38806 282 aaKnown RBP3.9□□□□□ -1.78
YGR027W-BYGR027W-B TAP42Q04372 366 aa3.9□□□□□ -1.78
YGR027W-BYGR027W-B POX1P13711 748 aa3.9□□□□□ -1.78
YGR027W-BYGR027W-B GBP2P25555 427 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
YGR027W-BYGR027W-B MCM5P29496 775 aaKnown RBP3.9□□□□□ -1.78
YGR027W-BYGR027W-B RRP3P38712 501 aaKnown RBP3.9□□□□□ -1.78
YGR027W-BYGR027W-B YGL140CP53120 1219 aa3.9□□□□□ -1.78
YGR027W-BYGR027W-B ALF1P53904 254 aa3.9□□□□□ -1.78
YGR027W-BYGR027W-B REC8Q12188 680 aa3.9□□□□□ -1.78
YGR027W-BYGR027W-B IPP1P00817 287 aaKnown RBP3.9□□□□□ -1.79
YGR027W-BYGR027W-B POT1P27796 417 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
YGR027W-BYGR027W-B YHR078WP38799 552 aa3.9□□□□□ -1.79
YGR027W-BYGR027W-B NOP13P53883 403 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
YGR027W-BYGR027W-B YSH1Q06224 779 aaPredicted RBP3.9□□□□□ -1.79
YGR027W-BYGR027W-B TGL5Q12043 749 aa3.9□□□□□ -1.79
YGR027W-BYGR027W-B YDR018CQ12185 396 aa3.9□□□□□ -1.79
YGR027W-BYGR027W-B MAK16P10962 306 aaPredicted RBP3.9□□□□□ -1.79
YGR027W-BYGR027W-B KRE2P27809 442 aa3.9□□□□□ -1.79
YGR027W-BYGR027W-B CCC2P38995 1004 aa3.9□□□□□ -1.79
YGR027W-BYGR027W-B VID28P40547 921 aa3.9□□□□□ -1.79
YGR027W-BYGR027W-B YNL115CP53925 644 aa3.9□□□□□ -1.79
YGR027W-BYGR027W-B WRS1Q12109 432 aaKnown RBP3.9□□□□□ -1.79
YGR027W-BYGR027W-B SSF2Q12153 453 aaPredicted RBP3.9□□□□□ -1.79
YGR027W-BYGR027W-B USO1P25386 1790 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B CYB2P00175 591 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B NUP1P20676 1076 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B NAB2P32505 525 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
YGR027W-BYGR027W-B LEU5P38702 357 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B HDA1P53973 706 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B EST2Q06163 884 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B SSB1P11484 613 aaKnown RBP3.89□□□□□ -1.79
YGR027W-BYGR027W-B MRP7P12687 371 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B SSB2P40150 613 aaKnown RBP3.89□□□□□ -1.79
YGR027W-BYGR027W-B YGR035CP53222 116 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B GPI13Q07830 1017 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B LYS2P07702 1392 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B RPB2P08518 1224 aaKnown RBP3.89□□□□□ -1.79
YGR027W-BYGR027W-B PGS1P25578 521 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B UBP7P40453 1071 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B SPP1Q03012 353 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B HAP2P06774 265 aa3.89□□□□□ -1.79
YGR027W-BYGR027W-B SRM1P21827 482 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms