RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W RIO1Q12196 484 aaKnown RBP5.34□□□□□ -1.55
RPL28YGL103W YRF1-3P0CX14 1859 aa5.34□□□□□ -1.55
RPL28YGL103W YRF1-7P0CX15 1859 aa5.34□□□□□ -1.55
RPL28YGL103W YRF1-6P53819 1859 aa5.34□□□□□ -1.55
RPL28YGL103W RPB2P08518 1224 aaKnown RBP5.33□□□□□ -1.56
RPL28YGL103W MIP1P15801 1254 aa5.33□□□□□ -1.56
RPL28YGL103W GSY1P23337 708 aa5.33□□□□□ -1.56
RPL28YGL103W APL1P27351 700 aa5.33□□□□□ -1.56
RPL28YGL103W GCG1P32656 232 aaKnown RBP5.33□□□□□ -1.56
RPL28YGL103W RAD5P32849 1169 aaPredicted RBP5.33□□□□□ -1.56
RPL28YGL103W OAF3P36023 863 aa5.33□□□□□ -1.56
RPL28YGL103W PPS1P38148 807 aa5.33□□□□□ -1.56
RPL28YGL103W ICP55P40051 511 aa5.33□□□□□ -1.56
RPL28YGL103W MMM1P41800 426 aa5.33□□□□□ -1.56
RPL28YGL103W SEC26P41810 973 aaKnown RBP5.33□□□□□ -1.56
RPL28YGL103W YFH7P43591 353 aa5.33□□□□□ -1.56
RPL28YGL103W ATG36P46983 293 aa5.33□□□□□ -1.56
RPL28YGL103W YJR039WP47107 1121 aa5.33□□□□□ -1.56
RPL28YGL103W ASE1P50275 885 aa5.33□□□□□ -1.56
RPL28YGL103W KAP114P53067 1004 aa5.33□□□□□ -1.56
RPL28YGL103W CPR6P53691 371 aaKnown RBP5.33□□□□□ -1.56
RPL28YGL103W IRC4Q03036 179 aa5.33□□□□□ -1.56
RPL28YGL103W UTP14Q04500 899 aaKnown RBP5.33□□□□□ -1.56
RPL28YGL103W ECI1Q05871 280 aa5.33□□□□□ -1.56
RPL28YGL103W LCB5Q06147 687 aaKnown RBP5.33□□□□□ -1.56
RPL28YGL103W MDM38Q08179 573 aa5.33□□□□□ -1.56
RPL28YGL103W FOB1O13329 566 aa5.32□□□□□ -1.56
RPL28YGL103W NUC1P08466 329 aa5.32□□□□□ -1.56
RPL28YGL103W KRS1P15180 591 aaKnown RBP5.32□□□□□ -1.56
RPL28YGL103W TUP1P16649 713 aa5.32□□□□□ -1.56
RPL28YGL103W PRP4P20053 465 aaKnown RBP5.32□□□□□ -1.56
RPL28YGL103W ACE2P21192 770 aa5.32□□□□□ -1.56
RPL28YGL103W SEC14P24280 304 aaKnown RBP5.32□□□□□ -1.56
RPL28YGL103W SPT5P27692 1063 aaKnown RBP5.32□□□□□ -1.56
RPL28YGL103W PDB1P32473 366 aaKnown RBP5.32□□□□□ -1.56
RPL28YGL103W TOM71P38825 639 aaKnown RBP5.32□□□□□ -1.56
RPL28YGL103W THI6P41835 540 aa5.32□□□□□ -1.56
RPL28YGL103W YNL320WP42840 284 aa5.32□□□□□ -1.56
RPL28YGL103W EMP47P43555 445 aa5.32□□□□□ -1.56
RPL28YGL103W JJJ2P46997 583 aa5.32□□□□□ -1.56
RPL28YGL103W BTN2P53286 410 aa5.32□□□□□ -1.56
RPL28YGL103W RET3P53600 189 aa5.32□□□□□ -1.56
RPL28YGL103W JJJ1P53863 590 aa5.32□□□□□ -1.56
RPL28YGL103W CBK1P53894 756 aa5.32□□□□□ -1.56
RPL28YGL103W GTR1Q00582 310 aa5.32□□□□□ -1.56
RPL28YGL103W VPS72Q03388 795 aa5.32□□□□□ -1.56
RPL28YGL103W PIG1Q06216 648 aa5.32□□□□□ -1.56
RPL28YGL103W DIB1Q06819 143 aaPredicted RBP5.32□□□□□ -1.56
RPL28YGL103W SIL1Q08199 421 aa5.32□□□□□ -1.56
RPL28YGL103W SEY1Q99287 776 aa5.32□□□□□ -1.56
RPL28YGL103W RIM15P43565 1770 aa5.32□□□□□ -1.56
RPL28YGL103W ARG82P07250 355 aa5.31□□□□□ -1.56
RPL28YGL103W POL3P15436 1097 aa5.31□□□□□ -1.56
RPL28YGL103W UBP1P25037 809 aa5.31□□□□□ -1.56
RPL28YGL103W RAM2P29703 316 aa5.31□□□□□ -1.56
RPL28YGL103W ZUO1P32527 433 aaKnown RBP5.31□□□□□ -1.56
RPL28YGL103W SPL2P38839 148 aa5.31□□□□□ -1.56
RPL28YGL103W CCT3P39077 534 aaKnown RBP5.31□□□□□ -1.56
RPL28YGL103W ATG32P40458 529 aa5.31□□□□□ -1.56
RPL28YGL103W CIT3P43635 486 aa5.31□□□□□ -1.56
RPL28YGL103W YJR142WP47173 342 aa5.31□□□□□ -1.56
RPL28YGL103W TAD1P53065 400 aa5.31□□□□□ -1.56
RPL28YGL103W HUL5P53119 910 aa5.31□□□□□ -1.56
RPL28YGL103W MDM1Q01846 1127 aa5.31□□□□□ -1.56
RPL28YGL103W SPO19Q03029 223 aa5.31□□□□□ -1.56
RPL28YGL103W DIG1Q03063 452 aaKnown RBP5.31□□□□□ -1.56
RPL28YGL103W GIR2Q03768 265 aaPredicted RBP5.31□□□□□ -1.56
RPL28YGL103W SAS4Q04003 481 aa5.31□□□□□ -1.56
RPL28YGL103W SYF1Q04048 859 aaPredicted RBP5.31□□□□□ -1.56
RPL28YGL103W TSR1Q07381 788 aaKnown RBP5.31□□□□□ -1.56
RPL28YGL103W BDF2Q07442 638 aa5.31□□□□□ -1.56
RPL28YGL103W DSE3Q08729 430 aa5.31□□□□□ -1.56
RPL28YGL103W AIM41Q12032 185 aa5.31□□□□□ -1.56
RPL28YGL103W BUG1Q12191 341 aa5.31□□□□□ -1.56
RPL28YGL103W CLF1Q12309 687 aaPredicted RBP5.31□□□□□ -1.56
RPL28YGL103W RAD3P06839 778 aa5.3□□□□□ -1.56
RPL28YGL103W ERG11P10614 530 aa5.3□□□□□ -1.56
RPL28YGL103W MAK16P10962 306 aaPredicted RBP5.3□□□□□ -1.56
RPL28YGL103W CKA2P19454 339 aa5.3□□□□□ -1.56
RPL28YGL103W PRP9P19736 530 aaKnown RBP5.3□□□□□ -1.56
RPL28YGL103W LCB1P25045 558 aaKnown RBP5.3□□□□□ -1.56
RPL28YGL103W ILV6P25605 309 aaKnown RBP5.3□□□□□ -1.56
RPL28YGL103W CDC11P32458 415 aa5.3□□□□□ -1.56
RPL28YGL103W FRD1P32614 470 aaKnown RBP5.3□□□□□ -1.56
RPL28YGL103W RPC37P36121 282 aa5.3□□□□□ -1.56
RPL28YGL103W HEK2P38199 381 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
RPL28YGL103W ORC6P38826 435 aa5.3□□□□□ -1.56
RPL28YGL103W TIF4631P39935 952 aaKnown RBP5.3□□□□□ -1.56
RPL28YGL103W BIM1P40013 344 aa5.3□□□□□ -1.56
RPL28YGL103W SAP185P40856 1058 aa5.3□□□□□ -1.56
RPL28YGL103W URB2P47108 1174 aa5.3□□□□□ -1.56
RPL28YGL103W YGR021WP53212 290 aa5.3□□□□□ -1.56
RPL28YGL103W NCS2P53923 493 aaPredicted RBP5.3□□□□□ -1.56
RPL28YGL103W VPS30Q02948 557 aa5.3□□□□□ -1.56
RPL28YGL103W YPL109CQ02981 657 aa5.3□□□□□ -1.56
RPL28YGL103W USA1Q03714 838 aa5.3□□□□□ -1.56
RPL28YGL103W PNP1Q05788 311 aa5.3□□□□□ -1.56
RPL28YGL103W CMS1Q07897 291 aaKnown RBP5.3□□□□□ -1.56
RPL28YGL103W TAF10Q12030 206 aa5.3□□□□□ -1.56
RPL28YGL103W PSF3Q12146 194 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms