RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	SEC27	P41811	889 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	UBP6	P43593	499 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	FYV8	P46949	817 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	SET2	P46995	733 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	PIB2	P53191	635 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	YKR005C	Q02203	525 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	ECM23	Q02710	187 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	VTI1	Q04338	217 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	SPP382	Q06411	708 aa	Predicted RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	YDR306C	Q06640	478 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	PYC1	P11154	1178 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	VMA1	P17255	1071 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	SPO11	P23179	398 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	CPS1	P27614	576 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	MVD1	P32377	396 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	ATO2	P32907	282 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	KES1	P35844	434 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	TIF4631	P39935	952 aa	Known RBP	5.86	□□□□□ -1.47
VTC2	YFL004W	UFD2	P54860	961 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	FMP30	Q02883	468 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	PIG1	Q06216	648 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	YLR001C	Q07895	862 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	ALR1	Q08269	859 aa		5.86	□□□□□ -1.47
VTC2	YFL004W	ADE2	P21264	571 aa	Known RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	YCR051W	P25631	222 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	CBF2	P32504	956 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	YEL1	P34225	687 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	SIP3	P38717	1229 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	CTM1	P38818	585 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	CCT2	P39076	527 aa	Known RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	ARB1	P40024	610 aa	Known RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	SYG1	P40528	902 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	SAP185	P40856	1058 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	DSL1	P53847	754 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	ATP25	Q03153	612 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	PIB1	Q06651	286 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	NEW1	Q08972	1196 aa	Known RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	SLX4	Q12098	748 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	IES3	Q12345	250 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	RPS24A	P0CX31	135 aa	Known RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	RPS24B	P0CX32	135 aa	Known RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	PET122	P10355	254 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	REC107	P21651	314 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	GCG1	P32656	232 aa	Known RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	NPL4	P33755	580 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	PET112	P33893	541 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	VPS35	P34110	944 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	SHC1	P39000	512 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	RPA14	P50106	137 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	PLP1	Q04004	230 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	YLR287C	Q05881	355 aa		5.85	□□□□□ -1.47
VTC2	YFL004W	YLR326W	Q06170	240 aa	Known RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	SPN1	Q06505	410 aa	Predicted RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	SGT2	Q12118	346 aa	Known RBP	5.85	□□□□□ -1.47
VTC2	YFL004W	ENO2	P00925	437 aa	Known RBP	5.84	□□□□□ -1.47
VTC2	YFL004W	RME1	P32338	300 aa	Known RBP	5.84	□□□□□ -1.47
VTC2	YFL004W	MRP8	P35719	219 aa		5.84	□□□□□ -1.47
VTC2	YFL004W	SSF1	P38789	453 aa	Predicted RBP	5.84	□□□□□ -1.47
VTC2	YFL004W	EPL1	P43572	832 aa		5.84	□□□□□ -1.47
VTC2	YFL004W	YJR039W	P47107	1121 aa		5.84	□□□□□ -1.47
VTC2	YFL004W	CSN12	P47130	423 aa		5.84	□□□□□ -1.47
VTC2	YFL004W	TEL2	P53038	688 aa		5.84	□□□□□ -1.47
VTC2	YFL004W	MDR1	P53258	950 aa		5.84	□□□□□ -1.47
VTC2	YFL004W	HST2	P53686	357 aa		5.84	□□□□□ -1.47
VTC2	YFL004W	COG6	P53959	839 aa		5.84	□□□□□ -1.47
VTC2	YFL004W	IMH1	Q06704	911 aa	Known RBP	5.84	□□□□□ -1.47
VTC2	YFL004W	RTP1	Q12751	981 aa		5.84	□□□□□ -1.47
VTC2	YFL004W	PEP3	P27801	918 aa		5.84	□□□□□ -1.48
VTC2	YFL004W	SIN4	P32259	974 aa		5.84	□□□□□ -1.48
VTC2	YFL004W	ETP1	P38748	585 aa	Known RBP	5.84	□□□□□ -1.48
VTC2	YFL004W	YIR042C	P40586	236 aa		5.84	□□□□□ -1.48
VTC2	YFL004W	CUE3	P53137	624 aa	Known RBP	5.84	□□□□□ -1.48
VTC2	YFL004W	ADE16	P54113	591 aa	Known RBP	5.84	□□□□□ -1.48
VTC2	YFL004W	MSH6	Q03834	1242 aa		5.84	□□□□□ -1.48
VTC2	YFL004W	SXM1	Q04175	944 aa	Known RBP	5.84	□□□□□ -1.48
VTC2	YFL004W	URH1	Q04179	340 aa		5.84	□□□□□ -1.48
VTC2	YFL004W	HFD1	Q04458	532 aa		5.84	□□□□□ -1.48
VTC2	YFL004W	YLH47	Q06493	454 aa		5.84	□□□□□ -1.48
VTC2	YFL004W	CSR1	Q06705	408 aa	Known RBP	5.84	□□□□□ -1.48
VTC2	YFL004W	MSH5	Q12175	901 aa		5.84	□□□□□ -1.48
VTC2	YFL004W	PWP1	P21304	576 aa	Known RBP	5.83	□□□□□ -1.48
VTC2	YFL004W	BAS1	P22035	811 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	VPH2	P32341	215 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	RAD54	P32863	898 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	BRO1	P48582	844 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	MCM6	P53091	1017 aa	Known RBP	5.83	□□□□□ -1.48
VTC2	YFL004W	SOV1	Q04748	898 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	NSE3	Q05541	303 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	PSR1	Q07800	427 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	SBP1	P10080	294 aa	Known RBP	5.83	□□□□□ -1.48
VTC2	YFL004W	SNA3	P14359	133 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	URA1	P28272	314 aa	Predicted RBP	5.83	□□□□□ -1.48
VTC2	YFL004W	PYC2	P32327	1180 aa	Known RBP	5.83	□□□□□ -1.48
VTC2	YFL004W	YKL091C	P33324	310 aa	Known RBP	5.83	□□□□□ -1.48
VTC2	YFL004W	TDA10	P42938	290 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	UTP22	P53254	1237 aa	Predicted RBP	5.83	□□□□□ -1.48
VTC2	YFL004W	UME1	Q03010	460 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	USA1	Q03714	838 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	MGR3	Q04472	501 aa		5.83	□□□□□ -1.48
VTC2	YFL004W	VAM6	Q07468	1049 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms