RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	CIT3	P43635	486 aa		7.24	□□□□□ -1.25
VMA3	YEL027W	AZR1	P50080	613 aa		7.24	□□□□□ -1.25
VMA3	YEL027W	FOL2	P51601	243 aa	Known RBP	7.24	□□□□□ -1.25
VMA3	YEL027W	SDA1	P53313	767 aa	Known RBP	7.24	□□□□□ -1.25
VMA3	YEL027W	OYE2	Q03558	400 aa	Known RBP	7.24	□□□□□ -1.25
VMA3	YEL027W	WHI4	Q07655	649 aa	Known RBP	7.24	□□□□□ -1.25
VMA3	YEL027W	TUF1	P02992	437 aa	Known RBP	7.23	□□□□□ -1.25
VMA3	YEL027W	AFT1	P22149	690 aa		7.23	□□□□□ -1.25
VMA3	YEL027W	BMH1	P29311	267 aa	Known RBP	7.23	□□□□□ -1.25
VMA3	YEL027W	RPN12	P32496	274 aa		7.23	□□□□□ -1.25
VMA3	YEL027W	TVP38	P36164	337 aa		7.23	□□□□□ -1.25
VMA3	YEL027W	ISW1	P38144	1129 aa		7.23	□□□□□ -1.25
VMA3	YEL027W	RVS167	P39743	482 aa	Known RBP	7.23	□□□□□ -1.25
VMA3	YEL027W	ALD5	P40047	520 aa	Known RBP	7.23	□□□□□ -1.25
VMA3	YEL027W	SGM1	P47166	707 aa		7.23	□□□□□ -1.25
VMA3	YEL027W	YPT11	P48559	417 aa		7.23	□□□□□ -1.25
VMA3	YEL027W	YGR273C	P53329	174 aa		7.23	□□□□□ -1.25
VMA3	YEL027W	KRE33	P53914	1056 aa	Known RBP	7.23	□□□□□ -1.25
VMA3	YEL027W	ORC4	P54791	529 aa		7.23	□□□□□ -1.25
VMA3	YEL027W	AIM33	Q04516	312 aa		7.23	□□□□□ -1.25
VMA3	YEL027W	GSY1	P23337	708 aa		7.22	□□□□□ -1.25
VMA3	YEL027W	KIN82	P25341	720 aa		7.22	□□□□□ -1.25
VMA3	YEL027W	IRE1	P32361	1115 aa		7.22	□□□□□ -1.25
VMA3	YEL027W	YKT6	P36015	200 aa	Known RBP	7.22	□□□□□ -1.25
VMA3	YEL027W	DID4	P36108	232 aa		7.22	□□□□□ -1.25
VMA3	YEL027W	GAA1	P39012	614 aa		7.22	□□□□□ -1.25
VMA3	YEL027W	YGR153W	P48238	217 aa		7.22	□□□□□ -1.25
VMA3	YEL027W	MFM1	Q02783	413 aa		7.22	□□□□□ -1.25
VMA3	YEL027W	SVF1	Q05515	481 aa		7.22	□□□□□ -1.25
VMA3	YEL027W	SMC6	Q12749	1114 aa		7.22	□□□□□ -1.25
VMA3	YEL027W	MOT1	P32333	1867 aa		7.21	□□□□□ -1.25
VMA3	YEL027W	FOB1	O13329	566 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	HIS4	P00815	799 aa	Known RBP	7.21	□□□□□ -1.26
VMA3	YEL027W	ILV1	P00927	576 aa	Known RBP	7.21	□□□□□ -1.26
VMA3	YEL027W	GPA1	P08539	472 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	CKA2	P19454	339 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	UBP11	P36026	717 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	GUA1	P38625	525 aa	Known RBP	7.21	□□□□□ -1.26
VMA3	YEL027W	BRL1	P38770	471 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	YER130C	P39959	443 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	YEL025C	P39991	1188 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	JHD1	P40034	492 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	THI6	P41835	540 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	UBA2	P52488	636 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	MDR1	P53258	950 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	ZPR1	P53303	486 aa	Known RBP	7.21	□□□□□ -1.26
VMA3	YEL027W	CNM67	P53865	581 aa	Known RBP	7.21	□□□□□ -1.26
VMA3	YEL027W	YNL115C	P53925	644 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	PHM6	Q05637	104 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	GPI13	Q07830	1017 aa		7.21	□□□□□ -1.26
VMA3	YEL027W	PGK1	P00560	416 aa	Known RBP	7.2	□□□□□ -1.26
VMA3	YEL027W	RME1	P32338	300 aa	Known RBP	7.2	□□□□□ -1.26
VMA3	YEL027W	PGM1	P33401	570 aa	Known RBP	7.2	□□□□□ -1.26
VMA3	YEL027W	ROG3	P43602	733 aa		7.2	□□□□□ -1.26
VMA3	YEL027W	RSC8	P43609	557 aa	Known RBP	7.2	□□□□□ -1.26
VMA3	YEL027W	PSP2	P50109	593 aa	Known RBP	7.2	□□□□□ -1.26
VMA3	YEL027W	CBK1	P53894	756 aa		7.2	□□□□□ -1.26
VMA3	YEL027W	YLH47	Q06493	454 aa		7.2	□□□□□ -1.26
VMA3	YEL027W	CRD1	Q07560	283 aa		7.2	□□□□□ -1.26
VMA3	YEL027W	ESS1	P22696	170 aa		7.19	□□□□□ -1.26
VMA3	YEL027W	HIR1	P32479	840 aa		7.19	□□□□□ -1.26
VMA3	YEL027W	POA1	P38218	177 aa		7.19	□□□□□ -1.26
VMA3	YEL027W	NPR3	P38742	1146 aa		7.19	□□□□□ -1.26
VMA3	YEL027W	TVP23	P38962	199 aa		7.19	□□□□□ -1.26
VMA3	YEL027W	INP51	P40559	946 aa	Known RBP	7.19	□□□□□ -1.26
VMA3	YEL027W	VTC2	P43585	828 aa		7.19	□□□□□ -1.26
VMA3	YEL027W	MCM6	P53091	1017 aa	Known RBP	7.19	□□□□□ -1.26
VMA3	YEL027W	TRS33	Q99394	268 aa		7.19	□□□□□ -1.26
VMA3	YEL027W	UBR2	Q07963	1872 aa		7.18	□□□□□ -1.26
VMA3	YEL027W	SWI6	P09959	803 aa		7.18	□□□□□ -1.26
VMA3	YEL027W	UBC1	P21734	215 aa	Known RBP	7.18	□□□□□ -1.26
VMA3	YEL027W	CAD1	P24813	409 aa	Known RBP	7.18	□□□□□ -1.26
VMA3	YEL027W	FUB1	P25659	250 aa		7.18	□□□□□ -1.26
VMA3	YEL027W	CDC15	P27636	974 aa		7.18	□□□□□ -1.26
VMA3	YEL027W	SMY2	P32909	740 aa	Known RBP	7.18	□□□□□ -1.26
VMA3	YEL027W	PET10	P36139	283 aa		7.18	□□□□□ -1.26
VMA3	YEL027W	RRM3	P38766	723 aa		7.18	□□□□□ -1.26
VMA3	YEL027W	GPD2	P41911	440 aa	Known RBP	7.18	□□□□□ -1.26
VMA3	YEL027W	VMS1	Q04311	632 aa	Known RBP	7.18	□□□□□ -1.26
VMA3	YEL027W	FUS2	Q05670	677 aa		7.18	□□□□□ -1.26
VMA3	YEL027W	ADY4	Q05955	493 aa		7.18	□□□□□ -1.26
VMA3	YEL027W	PSR2	Q07949	397 aa		7.18	□□□□□ -1.26
VMA3	YEL027W	YEL076C-A	P0CX16	216 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	YLR464W	P0CX17	216 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	TAF13	P11747	167 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	CLN3	P13365	580 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	MSS51	P32335	436 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	KNS1	P32350	737 aa	Predicted RBP	7.17	□□□□□ -1.26
VMA3	YEL027W	SUV3	P32580	737 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	SAC6	P32599	642 aa	Known RBP	7.17	□□□□□ -1.26
VMA3	YEL027W	YEL076C	P39971	216 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	NUP82	P40368	713 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	SPO74	P45819	413 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	YGR035C	P53222	116 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	PGA2	P53903	129 aa		7.17	□□□□□ -1.26
VMA3	YEL027W	CUS1	Q02554	436 aa	Predicted RBP	7.17	□□□□□ -1.26
VMA3	YEL027W	FKS1	P38631	1876 aa	Known RBP	7.16	□□□□□ -1.26
VMA3	YEL027W	YMR084W	A2P2R3	262 aa		7.16	□□□□□ -1.26
VMA3	YEL027W	SUP45	P12385	437 aa	Known RBP	7.16	□□□□□ -1.26
VMA3	YEL027W	ISY1	P21374	235 aa	Predicted RBP	7.16	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms