RNA–Protein interactions for RNA: YEL024W

RIP1, Transcript of Ubiquinol-cytochrome-c reductase, yeast

Gene RIP1, Length 648 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIP1	YEL024W	HUL4	P40985	892 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	AIP1	P46680	615 aa	Known RBP	4.92	□□□□□ -1.62
RIP1	YEL024W	COS5	P47187	383 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	LSB1	P53281	241 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	RPT4	P53549	437 aa	Known RBP	4.92	□□□□□ -1.62
RIP1	YEL024W	SEC5	P89102	971 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	TRS120	Q04183	1289 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	POB3	Q04636	552 aa	Known RBP	4.92	□□□□□ -1.62
RIP1	YEL024W	STE23	Q06010	1027 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	ACK1	Q07622	623 aa	Predicted RBP	4.92	□□□□□ -1.62
RIP1	YEL024W	YAP7	Q08182	245 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	DSE3	Q08729	430 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	APL5	Q08951	932 aa	Known RBP	4.92	□□□□□ -1.62
RIP1	YEL024W	RIO1	Q12196	484 aa	Known RBP	4.92	□□□□□ -1.62
RIP1	YEL024W	MAM3	Q12296	706 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	SMC6	Q12749	1114 aa		4.92	□□□□□ -1.62
RIP1	YEL024W	TUF1	P02992	437 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	RPB2	P08518	1224 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	SSB1	P11484	613 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	RPL8A	P17076	256 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	LCB1	P25045	558 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	CDC60	P26637	1090 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	PSO2	P30620	661 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	HXT1	P32465	570 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	YKL091C	P33324	310 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	PFF1	P38244	976 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	SPL2	P38839	148 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	SMF1	P38925	575 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	SSB2	P40150	613 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	CSM2	P40465	213 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	DSN1	P40568	576 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	CTK3	P46963	296 aa	Predicted RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	PTK2	P47116	818 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	ISM1	P48526	1002 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	MSN5	P52918	1224 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	FOL1	P53848	824 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	MDM1	Q01846	1127 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	UME1	Q03010	460 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	NGL3	Q03210	505 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	GIS4	Q04233	774 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	SMD2	Q06217	110 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	YPR078C	Q06813	372 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	SPO75	Q07798	868 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	KEL3	Q08979	651 aa	Predicted RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	WRS1	Q12109	432 aa	Known RBP	4.91	□□□□□ -1.62
RIP1	YEL024W	YRR1	Q12172	810 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	YOL087C	Q99247	1116 aa		4.91	□□□□□ -1.62
RIP1	YEL024W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RIP1	YEL024W	SPO12	P17123	173 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	RAD57	P25301	460 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	PDC6	P26263	563 aa	Known RBP	4.9	□□□□□ -1.63
RIP1	YEL024W	PSE1	P32337	1089 aa	Known RBP	4.9	□□□□□ -1.63
RIP1	YEL024W	SMY1	P32364	656 aa	Known RBP	4.9	□□□□□ -1.63
RIP1	YEL024W	RPT3	P33298	428 aa	Known RBP	4.9	□□□□□ -1.63
RIP1	YEL024W	SHM1	P37292	490 aa	Predicted RBP	4.9	□□□□□ -1.63
RIP1	YEL024W	GDT1	P38301	280 aa	Predicted RBP	4.9	□□□□□ -1.63
RIP1	YEL024W	LYS14	P40971	790 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	ROG3	P43602	733 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	YGR153W	P48238	217 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	VID30	P53076	958 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	CWC22	P53333	577 aa	Known RBP	4.9	□□□□□ -1.63
RIP1	YEL024W	DSE4	P53753	1117 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	TOF1	P53840	1238 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	CBK1	P53894	756 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	HDA1	P53973	706 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	EEB1	Q02891	456 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	PRP42	Q03776	544 aa	Known RBP	4.9	□□□□□ -1.63
RIP1	YEL024W	VTI1	Q04338	217 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	YLH47	Q06493	454 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	GYP1	Q08484	637 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	ZRT2	Q12436	422 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	YRF1-3	P0CX14	1859 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	YRF1-7	P0CX15	1859 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	YRF1-6	P53819	1859 aa		4.9	□□□□□ -1.63
RIP1	YEL024W	TOM70	P07213	617 aa	Known RBP	4.89	□□□□□ -1.63
RIP1	YEL024W	PPR1	P07272	904 aa	Predicted RBP	4.89	□□□□□ -1.63
RIP1	YEL024W	NUC1	P08466	329 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	SWI6	P09959	803 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	MIP1	P15801	1254 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	CDC10	P25342	322 aa	Known RBP	4.89	□□□□□ -1.63
RIP1	YEL024W	SPP381	P38282	291 aa	Predicted RBP	4.89	□□□□□ -1.63
RIP1	YEL024W	YHL050C	P38721	697 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	VPS45	P38932	577 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	NUP82	P40368	713 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	HXT8	P40886	569 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	MIC19	P43594	170 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	TRS85	P46944	698 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	RPC17	P47076	161 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	ASE1	P50275	885 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	HFM1	P51979	1187 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	BTN2	P53286	410 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	PUS6	P53294	404 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	VPS30	Q02948	557 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	YMR102C	Q03177	834 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	BUL2	Q03758	920 aa	Known RBP	4.89	□□□□□ -1.63
RIP1	YEL024W	GIR2	Q03768	265 aa	Predicted RBP	4.89	□□□□□ -1.63
RIP1	YEL024W	GYL1	Q04322	720 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	SOV1	Q04748	898 aa		4.89	□□□□□ -1.63
RIP1	YEL024W	VIP1	Q06685	1146 aa	Known RBP	4.89	□□□□□ -1.63
RIP1	YEL024W	PCL8	Q08966	492 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms