RNA–Protein interactions for RNA: YDR420W

HKR1, Transcript of Mucin family member that functions as an osmosensor in the HOG pathway, yeastyeast

Gene HKR1, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HKR1YDR420W VPH1P32563 840 aaKnown RBP1.51□□□□□ -2.17
HKR1YDR420W VMA8P32610 256 aaKnown RBP1.51□□□□□ -2.17
HKR1YDR420W SLX5P32828 619 aaKnown RBP1.51□□□□□ -2.17
HKR1YDR420W SEC6P32844 805 aa1.51□□□□□ -2.17
HKR1YDR420W CSE4P36012 229 aa1.51□□□□□ -2.17
HKR1YDR420W DBP7P36120 742 aaKnown RBP1.51□□□□□ -2.17
HKR1YDR420W YBR138CP38277 524 aa1.51□□□□□ -2.17
HKR1YDR420W PPE1P38796 400 aa1.51□□□□□ -2.17
HKR1YDR420W MGA2P40578 1113 aa1.51□□□□□ -2.17
HKR1YDR420W IML2P47031 731 aa1.51□□□□□ -2.17
HKR1YDR420W BPL1P48445 690 aaPredicted RBP1.51□□□□□ -2.17
HKR1YDR420W MDR1P53258 950 aa1.51□□□□□ -2.17
HKR1YDR420W OGG1P53397 376 aaPredicted RBP1.51□□□□□ -2.17
HKR1YDR420W CWC25P53854 179 aaKnown RBP1.51□□□□□ -2.17
HKR1YDR420W ELA1P53861 379 aaPredicted RBP1.51□□□□□ -2.17
HKR1YDR420W KRE33P53914 1056 aaKnown RBP1.51□□□□□ -2.17
HKR1YDR420W UFD2P54860 961 aa1.51□□□□□ -2.17
HKR1YDR420W HEH2Q03281 663 aa1.51□□□□□ -2.17
HKR1YDR420W TAF8Q03750 510 aa1.51□□□□□ -2.17
HKR1YDR420W BUL2Q03758 920 aaKnown RBP1.51□□□□□ -2.17
HKR1YDR420W FUS2Q05670 677 aa1.51□□□□□ -2.17
HKR1YDR420W VAC14Q06708 880 aa1.51□□□□□ -2.17
HKR1YDR420W SYO1Q07395 620 aa1.51□□□□□ -2.17
HKR1YDR420W WSC3Q12215 556 aa1.51□□□□□ -2.17
HKR1YDR420W MAM3Q12296 706 aa1.51□□□□□ -2.17
HKR1YDR420W RSC6P25632 483 aa1.5□□□□□ -2.17
HKR1YDR420W MSH1P25846 959 aa1.5□□□□□ -2.17
HKR1YDR420W DAL80P26343 269 aa1.5□□□□□ -2.17
HKR1YDR420W SMC1P32908 1225 aa1.5□□□□□ -2.17
HKR1YDR420W PAM1P37304 830 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W TOM71P38825 639 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W SHC1P39000 512 aa1.5□□□□□ -2.17
HKR1YDR420W AIM20P40451 204 aa1.5□□□□□ -2.17
HKR1YDR420W SAP185P40856 1058 aa1.5□□□□□ -2.17
HKR1YDR420W YMR074CQ04773 145 aa1.5□□□□□ -2.17
HKR1YDR420W SPC2Q04969 178 aa1.5□□□□□ -2.17
HKR1YDR420W MLH2Q07980 695 aa1.5□□□□□ -2.17
HKR1YDR420W YPL277CQ08989 487 aa1.5□□□□□ -2.17
HKR1YDR420W IES3Q12345 250 aa1.5□□□□□ -2.17
HKR1YDR420W THS1P04801 734 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W MRP7P12687 371 aa1.5□□□□□ -2.17
HKR1YDR420W CAF20P12962 161 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W TPM1P17536 199 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W HCA4P20448 770 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W TRX1P22217 103 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W TRX2P22803 104 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W APL2P36000 726 aaPredicted RBP1.5□□□□□ -2.17
HKR1YDR420W MAL31P38156 614 aa1.5□□□□□ -2.17
HKR1YDR420W STP2P38704 541 aa1.5□□□□□ -2.17
HKR1YDR420W RTS1P38903 757 aa1.5□□□□□ -2.17
HKR1YDR420W AKR1P39010 764 aa1.5□□□□□ -2.17
HKR1YDR420W KAP123P40069 1113 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W YJL055WP47044 245 aa1.5□□□□□ -2.17
HKR1YDR420W BBC1P47068 1157 aa1.5□□□□□ -2.17
HKR1YDR420W IST1P53843 298 aaPredicted RBP1.5□□□□□ -2.17
HKR1YDR420W MUK1Q02866 612 aa1.5□□□□□ -2.17
HKR1YDR420W SND1Q04007 877 aa1.5□□□□□ -2.17
HKR1YDR420W VTI1Q04338 217 aa1.5□□□□□ -2.17
HKR1YDR420W RSC3Q06639 885 aa1.5□□□□□ -2.17
HKR1YDR420W SUB2Q07478 446 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W VHS3Q08438 674 aa1.5□□□□□ -2.17
HKR1YDR420W ABP140Q08641 628 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W YPR204WQ08995 1032 aa1.5□□□□□ -2.17
HKR1YDR420W NFI1Q12216 726 aa1.5□□□□□ -2.17
HKR1YDR420W RPS24AP0CX31 135 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W RPS24BP0CX32 135 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W PET123P17558 318 aa1.5□□□□□ -2.17
HKR1YDR420W PRD1P25375 712 aa1.5□□□□□ -2.17
HKR1YDR420W KAP122P32767 1081 aa1.5□□□□□ -2.17
HKR1YDR420W MRP4P32902 394 aa1.5□□□□□ -2.17
HKR1YDR420W RSM22P36056 628 aa1.5□□□□□ -2.17
HKR1YDR420W RCK2P38623 610 aa1.5□□□□□ -2.17
HKR1YDR420W ORC6P38826 435 aa1.5□□□□□ -2.17
HKR1YDR420W JEM1P40358 645 aa1.5□□□□□ -2.17
HKR1YDR420W GPD2P41911 440 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W POL31P46957 487 aa1.5□□□□□ -2.17
HKR1YDR420W EAF6P47128 113 aa1.5□□□□□ -2.17
HKR1YDR420W PMT3P47190 753 aa1.5□□□□□ -2.17
HKR1YDR420W MSB3P48566 633 aaPredicted RBP1.5□□□□□ -2.17
HKR1YDR420W ALT1P52893 592 aa1.5□□□□□ -2.17
HKR1YDR420W TAF6P53040 516 aa1.5□□□□□ -2.17
HKR1YDR420W SVL3Q03088 825 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W YET3Q07451 203 aa1.5□□□□□ -2.17
HKR1YDR420W YOL057WQ08225 711 aa1.5□□□□□ -2.17
HKR1YDR420W GYP1Q08484 637 aa1.5□□□□□ -2.17
HKR1YDR420W GCN2P15442 1659 aa1.5□□□□□ -2.17
HKR1YDR420W COBP00163 385 aa1.5□□□□□ -2.17
HKR1YDR420W PAB1P04147 577 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
HKR1YDR420W MET6P05694 767 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W NOT3P06102 836 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W RPC40P07703 335 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W FUM1P08417 488 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
HKR1YDR420W LCB1P25045 558 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W ABZ1P37254 787 aaPredicted RBP1.5□□□□□ -2.17
HKR1YDR420W SUR2P38992 349 aa1.5□□□□□ -2.17
HKR1YDR420W ARB1P40024 610 aaKnown RBP1.5□□□□□ -2.17
HKR1YDR420W YIL166CP40445 542 aa1.5□□□□□ -2.17
HKR1YDR420W DOT5P40553 215 aa1.5□□□□□ -2.17
HKR1YDR420W MND2P40577 368 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 108.9 ms