RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	YHL044W	P38727	235 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	SAW1	P39735	261 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	FOL1	P53848	824 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	GIM3	P53900	129 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	ENT2	Q05785	613 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	MLH2	Q07980	695 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	SRN2	Q99176	213 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	HMG2	P12684	1045 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	CBS2	P14905	389 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	DAL1	P32375	460 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	SMI1	P32566	505 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	SKT5	P34226	696 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	HXT13	P39924	564 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	GCV1	P48015	400 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	YPR078C	Q06813	372 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	CRD1	Q07560	283 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	OPI10	Q08202	246 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	AAD15	Q08361	143 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	IML1	P47170	1584 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	RAV1	P47104	1357 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	INO1	P11986	533 aa		4.09	□□□□□ -1.76
RPO21	YDL140C	KIN1	P13185	1064 aa		4.09	□□□□□ -1.76
RPO21	YDL140C	VMA1	P17255	1071 aa	Known RBP	4.09	□□□□□ -1.76
RPO21	YDL140C	MGM1	P32266	881 aa		4.09	□□□□□ -1.76
RPO21	YDL140C	ALF1	P53904	254 aa		4.09	□□□□□ -1.76
RPO21	YDL140C	INM2	Q05533	292 aa		4.09	□□□□□ -1.76
RPO21	YDL140C	RPN7	Q06103	429 aa	Known RBP	4.09	□□□□□ -1.76
RPO21	YDL140C	SFI1	Q12369	946 aa		4.09	□□□□□ -1.76
RPO21	YDL140C	ATP4	P05626	244 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	ASH1	P34233	588 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	APM3	P38153	483 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	SPC97	P38863	823 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	HAL5	P38970	855 aa	Known RBP	4.08	□□□□□ -1.76
RPO21	YDL140C	RTT105	P40063	208 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	RSC4	Q02206	625 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	MSH6	Q03834	1242 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	PUS5	Q06244	254 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	AAD4	Q07747	329 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	HXK1	P04806	485 aa	Known RBP	4.08	□□□□□ -1.76
RPO21	YDL140C	SPO16	P17122	198 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	DBP3	P20447	523 aa	Known RBP	4.08	□□□□□ -1.76
RPO21	YDL140C	ATG3	P40344	310 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	YJR054W	P47114	497 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	NAF1	P53919	492 aa	Known RBP	4.08	□□□□□ -1.76
RPO21	YDL140C	SEC5	P89102	971 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	YLR297W	Q05899	129 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	YLR001C	Q07895	862 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	YVC1	Q12324	675 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	RPS6A	P0CX37	236 aa	Known RBP	4.08	□□□□□ -1.76
RPO21	YDL140C	RPS6B	P0CX38	236 aa	Predicted RBP	4.08	□□□□□ -1.76
RPO21	YDL140C	PHO87	P25360	923 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	VPS51	P36116	164 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	CDC27	P38042	758 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	ERC1	P38767	581 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	YEL025C	P39991	1188 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	FET5	P43561	622 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	ECL1	P48235	211 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	MSC2	Q03455	724 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	ATG23	Q06671	453 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	RPB4	P20433	221 aa	Predicted RBP	4.08	□□□□□ -1.76
RPO21	YDL140C	EXO84	P38261	753 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	TGL3	P40308	642 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	TOM22	P49334	152 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	YNL247W	P53852	767 aa	Known RBP	4.08	□□□□□ -1.76
RPO21	YDL140C	NTO1	Q12311	748 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	VTH1	P40438	1549 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	VTH2	P40890	1549 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	DRE2	P36152	348 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	UFE1	P41834	346 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	MRPS18	P42847	217 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	YJR030C	P47101	745 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	NHP10	Q03435	203 aa		4.08	□□□□□ -1.76
RPO21	YDL140C	RRP36	Q12481	300 aa	Predicted RBP	4.08	□□□□□ -1.76
RPO21	YDL140C	ILV1	P00927	576 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	TOM70	P07213	617 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	SAM2	P19358	384 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	DPH2	P32461	534 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	SEG2	P34250	1132 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	UIP5	P36137	443 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	YHL041W	P38730	149 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	DAN4	P47179	1161 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	ART5	P53244	586 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	YNR014W	P53719	212 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	OYE2	Q03558	400 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	COS7	Q07788	383 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	SLX4	Q12098	748 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	TAH18	Q12181	623 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	MAK11	P20484	414 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RPO21	YDL140C	CDC11	P32458	415 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	DTR1	P38125	572 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	PEX28	P38848	579 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	MET13	P53128	600 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	FOX2	Q02207	900 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	BUL2	Q03758	920 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	LSO1	Q3E827	93 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	RIP-Chip
RPO21	YDL140C	RAD53	P22216	821 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	NTR2	P36118	322 aa	Predicted RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	FIR1	P40020	876 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms