RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YOR223WQ12015 292 aa4.46□□□□□ -1.7
PTA1YAL043C HMI1Q12039 706 aa4.46□□□□□ -1.7
PTA1YAL043C BUG1Q12191 341 aa4.46□□□□□ -1.7
PTA1YAL043C DAL7P21826 554 aa4.45□□□□□ -1.7
PTA1YAL043C NIP100P33420 868 aa4.45□□□□□ -1.7
PTA1YAL043C YKL023WP36103 277 aaKnown RBP4.45□□□□□ -1.7
PTA1YAL043C RTS1P38903 757 aa4.45□□□□□ -1.7
PTA1YAL043C STT3P39007 718 aaKnown RBP4.45□□□□□ -1.7
PTA1YAL043C CTK3P46963 296 aaPredicted RBP4.45□□□□□ -1.7
PTA1YAL043C TAD1P53065 400 aa4.45□□□□□ -1.7
PTA1YAL043C DSE4P53753 1117 aa4.45□□□□□ -1.7
PTA1YAL043C MRS2Q01926 470 aa4.45□□□□□ -1.7
PTA1YAL043C RNT1Q02555 471 aa4.45□□□□□ -1.7
PTA1YAL043C VPS30Q02948 557 aa4.45□□□□□ -1.7
PTA1YAL043C UTP5Q04177 643 aaKnown RBP4.45□□□□□ -1.7
PTA1YAL043C SLK19Q08581 821 aaKnown RBP4.45□□□□□ -1.7
PTA1YAL043C YPL225WQ08971 146 aaKnown RBP4.45□□□□□ -1.7
PTA1YAL043C KEL3Q08979 651 aaPredicted RBP4.45□□□□□ -1.7
PTA1YAL043C OSH2Q12451 1283 aa4.45□□□□□ -1.7
PTA1YAL043C PPR1P07272 904 aaPredicted RBP4.45□□□□□ -1.7
PTA1YAL043C SAM2P19358 384 aaKnown RBP4.45□□□□□ -1.7
PTA1YAL043C GSY1P23337 708 aa4.45□□□□□ -1.7
PTA1YAL043C RPS7AP26786 190 aaKnown RBP4.45□□□□□ -1.7
PTA1YAL043C KRE2P27809 442 aa4.45□□□□□ -1.7
PTA1YAL043C CHS3P29465 1165 aa4.45□□□□□ -1.7
PTA1YAL043C SPC110P32380 944 aa4.45□□□□□ -1.7
PTA1YAL043C SMC1P32908 1225 aa4.45□□□□□ -1.7
PTA1YAL043C ISW1P38144 1129 aa4.45□□□□□ -1.7
PTA1YAL043C VFA1P40080 203 aa4.45□□□□□ -1.7
PTA1YAL043C CCM1P48237 864 aaPredicted RBP4.45□□□□□ -1.7
PTA1YAL043C DIG1Q03063 452 aaKnown RBP4.45□□□□□ -1.7
PTA1YAL043C URH1Q04179 340 aa4.45□□□□□ -1.7
PTA1YAL043C RIM15P43565 1770 aa4.44□□□□□ -1.7
PTA1YAL043C NUC1P08466 329 aa4.44□□□□□ -1.7
PTA1YAL043C THR4P16120 514 aaKnown RBP4.44□□□□□ -1.7
PTA1YAL043C CDC60P26637 1090 aaKnown RBP4.44□□□□□ -1.7
PTA1YAL043C BMH1P29311 267 aaKnown RBP4.44□□□□□ -1.7
PTA1YAL043C PIH1P38768 344 aa4.44□□□□□ -1.7
PTA1YAL043C EFM4P40516 257 aa4.44□□□□□ -1.7
PTA1YAL043C MVP1P40959 511 aaKnown RBP4.44□□□□□ -1.7
PTA1YAL043C HUL4P40985 892 aa4.44□□□□□ -1.7
PTA1YAL043C YFL034WP43564 1073 aa4.44□□□□□ -1.7
PTA1YAL043C VPS4P52917 437 aa4.44□□□□□ -1.7
PTA1YAL043C BNI5P53890 448 aaKnown RBP4.44□□□□□ -1.7
PTA1YAL043C ARG4P04076 463 aaPredicted RBP4.43□□□□□ -1.7
PTA1YAL043C ARG82P07250 355 aa4.43□□□□□ -1.7
PTA1YAL043C DPB3P27344 201 aa4.43□□□□□ -1.7
PTA1YAL043C HIR1P32479 840 aa4.43□□□□□ -1.7
PTA1YAL043C YBP1P38315 674 aa4.43□□□□□ -1.7
PTA1YAL043C ATG32P40458 529 aa4.43□□□□□ -1.7
PTA1YAL043C PUS6P53294 404 aa4.43□□□□□ -1.7
PTA1YAL043C NAF1P53919 492 aaKnown RBP4.43□□□□□ -1.7
PTA1YAL043C CEF1Q03654 590 aaPredicted RBP4.43□□□□□ -1.7
PTA1YAL043C SYF1Q04048 859 aaPredicted RBP4.43□□□□□ -1.7
PTA1YAL043C MYO5Q04439 1219 aaKnown RBP4.43□□□□□ -1.7
PTA1YAL043C CSR1Q06705 408 aaKnown RBP4.43□□□□□ -1.7
PTA1YAL043C TFB4Q12004 338 aa4.43□□□□□ -1.7
PTA1YAL043C YRR1Q12172 810 aa4.43□□□□□ -1.7
PTA1YAL043C TIP41Q12199 356 aa4.43□□□□□ -1.7
PTA1YAL043C RKM4Q12504 494 aa4.43□□□□□ -1.7
PTA1YAL043C ILV1P00927 576 aaKnown RBP4.43□□□□□ -1.7
PTA1YAL043C PDR1P12383 1068 aa4.43□□□□□ -1.7
PTA1YAL043C TUP1P16649 713 aa4.43□□□□□ -1.7
PTA1YAL043C ALG1P16661 449 aa4.43□□□□□ -1.7
PTA1YAL043C RET1P22276 1149 aaKnown RBP4.43□□□□□ -1.7
PTA1YAL043C MSH1P25846 959 aa4.43□□□□□ -1.7
PTA1YAL043C GPI10P30777 616 aa4.43□□□□□ -1.7
PTA1YAL043C SMY1P32364 656 aaKnown RBP4.43□□□□□ -1.7
PTA1YAL043C ASF1P32447 279 aa4.43□□□□□ -1.7
PTA1YAL043C CBF2P32504 956 aa4.43□□□□□ -1.7
PTA1YAL043C SRB4P32569 687 aa4.43□□□□□ -1.7
PTA1YAL043C MCX1P38323 520 aaPredicted RBP4.43□□□□□ -1.7
PTA1YAL043C EFM2P38347 419 aa4.43□□□□□ -1.7
PTA1YAL043C MMM1P41800 426 aa4.43□□□□□ -1.7
PTA1YAL043C EMP47P43555 445 aa4.43□□□□□ -1.7
PTA1YAL043C YGL138CP53122 345 aa4.43□□□□□ -1.7
PTA1YAL043C GUP1P53154 560 aa4.43□□□□□ -1.7
PTA1YAL043C CBK1P53894 756 aa4.43□□□□□ -1.7
PTA1YAL043C ALF1P53904 254 aa4.43□□□□□ -1.7
PTA1YAL043C ZRT2Q12436 422 aa4.43□□□□□ -1.7
PTA1YAL043C RAD61Q99359 647 aa4.43□□□□□ -1.7
PTA1YAL043C CYB2P00175 591 aa4.42□□□□□ -1.7
PTA1YAL043C SRP54P20424 541 aaKnown RBP4.42□□□□□ -1.7
PTA1YAL043C SAS3P34218 831 aa4.42□□□□□ -1.7
PTA1YAL043C SET5P38890 526 aaKnown RBP4.42□□□□□ -1.7
PTA1YAL043C ALG2P43636 503 aa4.42□□□□□ -1.7
PTA1YAL043C RTC4P53850 401 aa4.42□□□□□ -1.7
PTA1YAL043C PGA2P53903 129 aa4.42□□□□□ -1.7
PTA1YAL043C SEN54Q02825 467 aaPredicted RBP4.42□□□□□ -1.7
PTA1YAL043C NGL3Q03210 505 aa4.42□□□□□ -1.7
PTA1YAL043C YDR278CQ05612 105 aa4.42□□□□□ -1.7
PTA1YAL043C MAM3Q12296 706 aa4.42□□□□□ -1.7
PTA1YAL043C GAP1P19145 602 aaPredicted RBP4.42□□□□□ -1.7
PTA1YAL043C SPO11P23179 398 aa4.42□□□□□ -1.7
PTA1YAL043C TRK2P28584 889 aa4.42□□□□□ -1.7
PTA1YAL043C RIX1P38883 763 aaPredicted RBP4.42□□□□□ -1.7
PTA1YAL043C CCC2P38995 1004 aa4.42□□□□□ -1.7
PTA1YAL043C CCT2P39076 527 aaKnown RBP4.42□□□□□ -1.7
PTA1YAL043C KAP123P40069 1113 aaKnown RBP4.42□□□□□ -1.7
PTA1YAL043C YGR153WP48238 217 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms