RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene SPO7, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO7YAL009W BRE5P53741 515 aaKnown RBP6.87□□□□□ -1.31
SPO7YAL009W HDA1P53973 706 aa6.87□□□□□ -1.31
SPO7YAL009W UFD2P54860 961 aa6.87□□□□□ -1.31
SPO7YAL009W DUS4Q06063 367 aa6.87□□□□□ -1.31
SPO7YAL009W RIM20Q12033 661 aa6.87□□□□□ -1.31
SPO7YAL009W PRE10P21242 288 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
SPO7YAL009W UTR4P32626 227 aa6.86□□□□□ -1.31
SPO7YAL009W MYO3P36006 1272 aa6.86□□□□□ -1.31
SPO7YAL009W GPB2P39717 880 aa6.86□□□□□ -1.31
SPO7YAL009W AFG3P39925 761 aa6.86□□□□□ -1.31
SPO7YAL009W MXR1P40029 184 aa6.86□□□□□ -1.31
SPO7YAL009W THI72Q08579 599 aa6.86□□□□□ -1.31
SPO7YAL009W SUT2Q12286 268 aa6.86□□□□□ -1.31
SPO7YAL009W RIT1P23796 513 aa6.85□□□□□ -1.31
SPO7YAL009W ANP1P32629 500 aa6.85□□□□□ -1.31
SPO7YAL009W LDH1P38139 375 aa6.85□□□□□ -1.31
SPO7YAL009W ALD6P54115 500 aaKnown RBP6.85□□□□□ -1.31
SPO7YAL009W BUL2Q03758 920 aaKnown RBP6.85□□□□□ -1.31
SPO7YAL009W ICL2Q12031 575 aa6.85□□□□□ -1.31
SPO7YAL009W YOR131CQ12486 218 aa6.85□□□□□ -1.31
SPO7YAL009W SAM1P10659 382 aaKnown RBP6.84□□□□□ -1.31
SPO7YAL009W SRP40P32583 406 aaPredicted RBP6.84□□□□□ -1.31
SPO7YAL009W BCS1P32839 456 aa6.84□□□□□ -1.31
SPO7YAL009W AAP1P37898 856 aaKnown RBP6.84□□□□□ -1.31
SPO7YAL009W MRPL16P38064 232 aa6.84□□□□□ -1.31
SPO7YAL009W PHO88P38264 188 aaPredicted RBP6.84□□□□□ -1.31
SPO7YAL009W YFL066CP43538 392 aa6.84□□□□□ -1.31
SPO7YAL009W FOL1P53848 824 aa6.84□□□□□ -1.31
SPO7YAL009W TMA64Q04600 565 aaKnown RBP6.84□□□□□ -1.31
SPO7YAL009W SUE1Q06524 206 aa6.84□□□□□ -1.31
SPO7YAL009W MET7Q08645 548 aa6.84□□□□□ -1.31
SPO7YAL009W VAS1P07806 1104 aaKnown RBP6.83□□□□□ -1.32
SPO7YAL009W NUC1P08466 329 aa6.83□□□□□ -1.32
SPO7YAL009W TGL1P34163 548 aa6.83□□□□□ -1.32
SPO7YAL009W SHP1P34223 423 aa6.83□□□□□ -1.32
SPO7YAL009W UIP5P36137 443 aa6.83□□□□□ -1.32
SPO7YAL009W ACS2P52910 683 aaKnown RBP6.83□□□□□ -1.32
SPO7YAL009W VPS30Q02948 557 aa6.83□□□□□ -1.32
SPO7YAL009W YDR461C-AQ2V2P7 80 aa6.83□□□□□ -1.32
SPO7YAL009W TSC13Q99190 310 aa6.83□□□□□ -1.32
SPO7YAL009W YPR117WQ06116 2489 aa6.83□□□□□ -1.32
SPO7YAL009W AIM21P40563 679 aa6.82□□□□□ -1.32
SPO7YAL009W YFL034WP43564 1073 aa6.82□□□□□ -1.32
SPO7YAL009W YJR107WP47145 328 aa6.82□□□□□ -1.32
SPO7YAL009W SCS3P53012 380 aa6.82□□□□□ -1.32
SPO7YAL009W SSF2Q12153 453 aaPredicted RBP6.82□□□□□ -1.32
SPO7YAL009W MDM20Q12387 796 aaKnown RBP6.82□□□□□ -1.32
SPO7YAL009W RGT1P32862 1170 aa6.81□□□□□ -1.32
SPO7YAL009W RER2P35196 286 aa6.81□□□□□ -1.32
SPO7YAL009W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
SPO7YAL009W NDT80P38830 627 aa6.81□□□□□ -1.32
SPO7YAL009W CRG1P38892 291 aaRIP-Chip data6.81□□□□□ -1.32not detected
SPO7YAL009W CSM2P40465 213 aa6.81□□□□□ -1.32
SPO7YAL009W SBE2P42223 864 aaKnown RBP6.81□□□□□ -1.32
SPO7YAL009W YGL039WP53183 348 aaKnown RBP6.81□□□□□ -1.32
SPO7YAL009W YGR125WP53273 1036 aa6.81□□□□□ -1.32
SPO7YAL009W YAF9P53930 226 aa6.81□□□□□ -1.32
SPO7YAL009W RPT6Q01939 405 aaKnown RBP6.81□□□□□ -1.32
SPO7YAL009W SLD5Q03406 294 aa6.81□□□□□ -1.32
SPO7YAL009W MYO5Q04439 1219 aaKnown RBP6.81□□□□□ -1.32
SPO7YAL009W DUS3Q06053 668 aaKnown RBP6.81□□□□□ -1.32
SPO7YAL009W SPH1Q06160 661 aa6.81□□□□□ -1.32
SPO7YAL009W FPR4Q06205 392 aaPredicted RBP6.81□□□□□ -1.32
SPO7YAL009W SPN1Q06505 410 aaPredicted RBP6.81□□□□□ -1.32
SPO7YAL009W ECM30Q06673 1274 aa6.81□□□□□ -1.32
SPO7YAL009W UTP4Q06679 776 aaKnown RBP6.81□□□□□ -1.32
SPO7YAL009W STB3Q12427 513 aa6.81□□□□□ -1.32
SPO7YAL009W PGA3Q12746 312 aaKnown RBP6.81□□□□□ -1.32
SPO7YAL009W RAD50P12753 1312 aa6.8□□□□□ -1.32
SPO7YAL009W SRP54P20424 541 aaKnown RBP6.8□□□□□ -1.32
SPO7YAL009W YUR1P26725 428 aa6.8□□□□□ -1.32
SPO7YAL009W RPL8BP29453 256 aaKnown RBP6.8□□□□□ -1.32
SPO7YAL009W YKR018CP36114 725 aa6.8□□□□□ -1.32
SPO7YAL009W KSP1P38691 1029 aaKnown RBP6.8□□□□□ -1.32
SPO7YAL009W TOM71P38825 639 aaKnown RBP6.8□□□□□ -1.32
SPO7YAL009W VPS45P38932 577 aa6.8□□□□□ -1.32
SPO7YAL009W YPL034WQ03083 165 aa6.8□□□□□ -1.32
SPO7YAL009W ECM16Q04217 1267 aaKnown RBP6.8□□□□□ -1.32
SPO7YAL009W AI1P03875 834 aa6.79□□□□□ -1.32
SPO7YAL009W PHR1P05066 565 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
SPO7YAL009W CYT1P07143 309 aa6.79□□□□□ -1.32
SPO7YAL009W MAK31P23059 88 aa6.79□□□□□ -1.32
SPO7YAL009W MLF3P32047 452 aa6.79□□□□□ -1.32
SPO7YAL009W IMP2'P32351 346 aa6.79□□□□□ -1.32
SPO7YAL009W KTR2P33550 425 aa6.79□□□□□ -1.32
SPO7YAL009W DBP7P36120 742 aaKnown RBP6.79□□□□□ -1.32
SPO7YAL009W BRN1P38170 754 aa6.79□□□□□ -1.32
SPO7YAL009W PES4P39684 611 aa6.79□□□□□ -1.32
SPO7YAL009W FIR1P40020 876 aa6.79□□□□□ -1.32
SPO7YAL009W CTR1P49573 406 aa6.79□□□□□ -1.32
SPO7YAL009W TFC6Q06339 672 aa6.79□□□□□ -1.32
SPO7YAL009W MSC6Q08818 692 aaKnown RBP6.79□□□□□ -1.32
SPO7YAL009W ERP3Q12403 225 aa6.79□□□□□ -1.32
SPO7YAL009W Q0182Q9ZZW1 134 aa6.79□□□□□ -1.32
SPO7YAL009W MCR1P36060 302 aaKnown RBP6.78□□□□□ -1.32
SPO7YAL009W CIC1P38779 376 aaKnown RBP6.78□□□□□ -1.32
SPO7YAL009W SKP2P42843 763 aa6.78□□□□□ -1.32
SPO7YAL009W HXT17P53631 564 aa6.78□□□□□ -1.32
SPO7YAL009W YVH1Q02256 364 aaKnown RBP6.78□□□□□ -1.32
SPO7YAL009W YMR321CQ04898 105 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms