RNA–Protein interactions for RNA: ENSMUST00000174592.7

Ccdc28a-205, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-205ENSMUST00000174592 Gja5Q01231 358 aa12.39□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Nsfl1cQ9CZ44 370 aaKnown RBP12.39□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Anks4bQ8K3X6 423 aa12.38□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Olfr247E9PVJ7 320 aa12.37□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Olfr819K7N727 320 aa12.37□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Dpf2Q61103 391 aaKnown RBP12.37□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Soga3Q6NZL0 945 aa12.37□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Clcn1Q64347 994 aa12.36□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Ccdc155Q80VJ8 648 aa12.36□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Plin1Q8CGN5 517 aa12.36□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Trip6Q9Z1Y4 480 aa12.36□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Ambra1A2AH22 1300 aa12.36□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Nlgn2Q69ZK9 836 aa12.35□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 HypkQ9CR41 129 aa12.35□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Amotl1Q9D4H4 968 aa12.35□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Cwc22Q8C5N3 908 aaKnown RBP12.34□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Ripk3Q9QZL0 486 aa12.34□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 AceP09470 1312 aa12.34□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Col5a2Q3U962 1497 aa12.34□□□□□ -0.43
Ccdc28a-205ENSMUST00000174592 Strn4P58404 760 aa12.33□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Stra8P70278 393 aa12.33□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Tbc1d32Q3URV1 1296 aa12.33□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Glis2Q8VDL9 521 aa12.33□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Zbtb1Q91VL9 713 aa12.33□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Dcaf11Q91VU6 549 aa12.33□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Efcab2Q9CQ46 164 aa12.33□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Syde2E9PUP1 1314 aa12.33□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Kndc1Q0KK55 1742 aa12.32□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Zfp777B9EKF4 885 aa12.32□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Hspa8P63017 646 aaKnown RBP12.32□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Zc3h15Q3TIV5 426 aaKnown RBP12.32□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Ubxn2aQ99KJ0 258 aa12.32□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Zfp831A2ADM8 1628 aa12.32□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Aox2Q5SGK3 1345 aa12.32□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Thsd7bQ6P4U0 1607 aa12.31□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Llgl2Q3TJ91 1027 aa12.31□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Znf219Q6IQX8 726 aa12.31□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Ttc5Q99LG4 440 aa12.31□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Nip7Q9CXK8 180 aaKnown RBP12.31□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Arid3aQ62431 601 aa12.3□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Rsph6aQ8CDR2 708 aa12.3□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 St5Q924W7 1134 aa12.3□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Dpf1Q9QX66 387 aa12.3□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Dcdc2bF7BCK0 340 aa12.29□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Map3k9Q3U1V8 1077 aa12.29□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Sin3aQ60520 1274 aaKnown RBP12.29□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Vil1Q62468 827 aa12.29□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Ppp1r15aP17564 657 aa12.28□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Lrch1P62046 709 aa12.28□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Atp2b4Q6Q477 1205 aa12.28□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Rapgef4Q9EQZ6 1011 aa12.28□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Ptf1aQ9QX98 324 aa12.28□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Flt1P35969 1333 aa12.28□□□□□ -0.44
Ccdc28a-205ENSMUST00000174592 Nkx2-3P97334 362 aa12.27□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Plekhg5Q66T02 1073 aa12.27□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Trpm7Q923J1 1863 aa12.27□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Trim28Q62318 834 aa12.26□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Kcnc4Q8R1C0 628 aa12.25□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 PrxO55103 1391 aa12.25□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 MetP16056 1379 aa12.25□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Prr5lA2AVJ5 370 aa12.24□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Adamts19P59509 1210 aa12.24□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Nup188Q6ZQH8 1759 aa12.24□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Lysmd1Q9D0E3 226 aa12.24□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Mkrn1Q9QXP6 481 aa12.24□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Pou3f3P31361 497 aa12.23□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Snai1Q02085 264 aa12.23□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Fhdc1Q3ULZ2 1149 aa12.23□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Slf2Q6P9P0 1278 aa12.23□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Ildr1Q8CBR1 537 aa12.23□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Rab11fip3Q8CHD8 1047 aa12.23□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Mylk2Q8VCR8 613 aa12.23□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Zfp646Q6NV66 1788 aa12.23□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Scn9aQ62205 1984 aa12.22□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Prr29B1ARI9 187 aa12.22□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Evi5P97366 809 aa12.22□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Esco1Q69Z69 843 aa12.22□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Pank3Q8R2W9 370 aa12.22□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Dpp7Q9ET22 506 aa12.22□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 PigbQ9JJQ0 542 aa12.22□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Nav1Q8CH77 1875 aa12.22□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 TnikP83510 1323 aa12.21□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Eif6O55135 245 aa12.21□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Gm12185Q5NCB2 835 aa12.21□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Foxn1Q61575 648 aa12.21□□□□□ -0.45
Ccdc28a-205ENSMUST00000174592 Spef2Q8C9J3 1734 aa12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Glt1d1A4FUP9 346 aa12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Pde4bB1AWC9 736 aa12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Mcm10Q0VBD2 885 aa12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Dok7Q18PE0 504 aa12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Angel2Q8K1C0 544 aa12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Slc12a5Q91V14 1138 aa12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Tm4sf4Q91XD3 202 aa12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Rbm5Q91YE7 815 aaKnown RBP12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 NgdnQ9DB96 315 aaKnown RBP12.2□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Csf1rP09581 977 aa12.19□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Mansc4Q3UU94 337 aa12.19□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Inpp5dQ9ES52 1191 aa12.19□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Tnnt3Q9QZ47 272 aa12.19□□□□□ -0.46
Ccdc28a-205ENSMUST00000174592 Tiam2Q6ZPF3 1715 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms