Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm25239-201ENSMUST00000174915 86 ntBASIC45,56■■■■■ 4,88
Lysmd1Q9D0E3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42,69■■■■■ 4,42
Lysmd1Q9D0E3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41,96■■■■■ 4,31
Lysmd1Q9D0E3 Gm24109-201ENSMUST00000175489 103 ntBASIC40,16■■■■■ 4,02
Lysmd1Q9D0E3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38,75■■■■□ 3,79
Lysmd1Q9D0E3 Gm15042-201ENSMUST00000120212 883 ntBASIC38,67■■■■□ 3,78
Lysmd1Q9D0E3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38,53■■■■□ 3,76
Lysmd1Q9D0E3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38,37■■■■□ 3,73
Lysmd1Q9D0E3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38,02■■■■□ 3,68
Lysmd1Q9D0E3 Gm23366-201ENSMUST00000175022 89 ntBASIC37,9■■■■□ 3,66
Lysmd1Q9D0E3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37,82■■■■□ 3,64
Lysmd1Q9D0E3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37,68■■■■□ 3,62
Lysmd1Q9D0E3 Gm15045-201ENSMUST00000117359 883 ntBASIC37,57■■■■□ 3,6
Lysmd1Q9D0E3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37,56■■■■□ 3,6
Lysmd1Q9D0E3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37,55■■■■□ 3,6
Lysmd1Q9D0E3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37,23■■■■□ 3,55
Lysmd1Q9D0E3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36,51■■■■□ 3,44
Lysmd1Q9D0E3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36,48■■■■□ 3,43
Lysmd1Q9D0E3 Gm25238-201ENSMUST00000174914 89 ntBASIC36,32■■■■□ 3,4
Lysmd1Q9D0E3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36,23■■■■□ 3,39
Lysmd1Q9D0E3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36,2■■■■□ 3,39
Lysmd1Q9D0E3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35,96■■■■□ 3,35
Lysmd1Q9D0E3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35,63■■■■□ 3,29
Lysmd1Q9D0E3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35,54■■■■□ 3,28
Lysmd1Q9D0E3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35,47■■■■□ 3,27
Lysmd1Q9D0E3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35,46■■■■□ 3,27
Lysmd1Q9D0E3 Gm25262-201ENSMUST00000174934 133 ntBASIC35,42■■■■□ 3,26
Lysmd1Q9D0E3 Gm26115-201ENSMUST00000175605 87 ntBASIC35,04■■■■□ 3,2
Lysmd1Q9D0E3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34,98■■■■□ 3,19
Lysmd1Q9D0E3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34,97■■■■□ 3,19
Lysmd1Q9D0E3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34,96■■■■□ 3,19
Lysmd1Q9D0E3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34,68■■■■□ 3,14
Lysmd1Q9D0E3 Gm8109-201ENSMUST00000194076 746 ntBASIC34,68■■■■□ 3,14
Lysmd1Q9D0E3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34,67■■■■□ 3,14
Lysmd1Q9D0E3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34,65■■■■□ 3,14
Lysmd1Q9D0E3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34,39■■■■□ 3,1
Lysmd1Q9D0E3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34,39■■■■□ 3,1
Lysmd1Q9D0E3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34,18■■■■□ 3,06
Lysmd1Q9D0E3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34,17■■■■□ 3,06
Lysmd1Q9D0E3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34,08■■■■□ 3,05
Lysmd1Q9D0E3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC34,06■■■■□ 3,04
Lysmd1Q9D0E3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33,91■■■■□ 3,02
Lysmd1Q9D0E3 Rab21-202ENSMUST00000218831 843 ntBASIC33,83■■■■□ 3,01
Lysmd1Q9D0E3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33,77■■■■□ 3
Lysmd1Q9D0E3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33,76■■■□□ 2,99
Lysmd1Q9D0E3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33,75■■■□□ 2,99
Lysmd1Q9D0E3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33,68■■■□□ 2,98
Lysmd1Q9D0E3 Gm27325-201ENSMUST00000175467 74 ntBASIC33,65■■■□□ 2,98
Lysmd1Q9D0E3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33,52■■■□□ 2,96
Lysmd1Q9D0E3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33,42■■■□□ 2,94
Lysmd1Q9D0E3 Gm24804-201ENSMUST00000174982 85 ntBASIC33,38■■■□□ 2,93
Lysmd1Q9D0E3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33,37■■■□□ 2,93
Lysmd1Q9D0E3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33,26■■■□□ 2,91
Lysmd1Q9D0E3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33,23■■■□□ 2,91
Lysmd1Q9D0E3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33,21■■■□□ 2,91
Lysmd1Q9D0E3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,14■■■□□ 2,9
Lysmd1Q9D0E3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33,13■■■□□ 2,89
Lysmd1Q9D0E3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC33,13■■■□□ 2,89
Lysmd1Q9D0E3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33,09■■■□□ 2,89
Lysmd1Q9D0E3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC33,07■■■□□ 2,88
Lysmd1Q9D0E3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,05■■■□□ 2,88
Lysmd1Q9D0E3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33,04■■■□□ 2,88
Lysmd1Q9D0E3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,02■■■□□ 2,88
Lysmd1Q9D0E3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33,02■■■□□ 2,88
Lysmd1Q9D0E3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33,02■■■□□ 2,88
Lysmd1Q9D0E3 Gm17082-201ENSMUST00000166043 1091 ntBASIC32,94■■■□□ 2,86
Lysmd1Q9D0E3 Zfp131-205ENSMUST00000223812 663 ntBASIC32,94■■■□□ 2,86
Lysmd1Q9D0E3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,88■■■□□ 2,85
Lysmd1Q9D0E3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32,86■■■□□ 2,85
Lysmd1Q9D0E3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32,83■■■□□ 2,85
Lysmd1Q9D0E3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32,77■■■□□ 2,84
Lysmd1Q9D0E3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32,77■■■□□ 2,84
Lysmd1Q9D0E3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32,77■■■□□ 2,84
Lysmd1Q9D0E3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32,74■■■□□ 2,83
Lysmd1Q9D0E3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32,72■■■□□ 2,83
Lysmd1Q9D0E3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,71■■■□□ 2,83
Lysmd1Q9D0E3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32,65■■■□□ 2,82
Lysmd1Q9D0E3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32,64■■■□□ 2,82
Lysmd1Q9D0E3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32,61■■■□□ 2,81
Lysmd1Q9D0E3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32,61■■■□□ 2,81
Lysmd1Q9D0E3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32,58■■■□□ 2,81
Lysmd1Q9D0E3 Gm27322-201ENSMUST00000184007 104 ntBASIC32,52■■■□□ 2,8
Lysmd1Q9D0E3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32,48■■■□□ 2,79
Lysmd1Q9D0E3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32,43■■■□□ 2,78
Lysmd1Q9D0E3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32,38■■■□□ 2,77
Lysmd1Q9D0E3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32,38■■■□□ 2,77
Lysmd1Q9D0E3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32,34■■■□□ 2,77
Lysmd1Q9D0E3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32,33■■■□□ 2,77
Lysmd1Q9D0E3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32,29■■■□□ 2,76
Lysmd1Q9D0E3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32,28■■■□□ 2,76
Lysmd1Q9D0E3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Lysmd1Q9D0E3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32,24■■■□□ 2,75
Lysmd1Q9D0E3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32,21■■■□□ 2,75
Lysmd1Q9D0E3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32,2■■■□□ 2,75
Lysmd1Q9D0E3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32,2■■■□□ 2,75
Lysmd1Q9D0E3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32,2■■■□□ 2,75
Lysmd1Q9D0E3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32,05■■■□□ 2,72
Lysmd1Q9D0E3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32,03■■■□□ 2,72
Lysmd1Q9D0E3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32■■■□□ 2,71
Lysmd1Q9D0E3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31,99■■■□□ 2,71
Retrieved 100 of 76,532 protein–RNA pairs in 9,8 ms