RNA–Protein interactions for RNA: ENSMUST00000174592.7

Ccdc28a-205, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-205ENSMUST00000174592 Gm35339A0A140LHH9 1649 aa21.87■■□□□ 1.09
Ccdc28a-205ENSMUST00000174592 NischQ80TM9 1593 aa21.4■■□□□ 1.02
Ccdc28a-205ENSMUST00000174592 Abcc9P70170 1546 aa21.35■■□□□ 1.01
Ccdc28a-205ENSMUST00000174592 Abcc8B2RUS7 1588 aa20.88■□□□□ 0.93
Ccdc28a-205ENSMUST00000174592 ScribQ80U72 1612 aa20.52■□□□□ 0.88
Ccdc28a-205ENSMUST00000174592 Dnajc5bQ9CQ94 199 aa20.02■□□□□ 0.8
Ccdc28a-205ENSMUST00000174592 NacadQ5SWP3 1504 aa19.86■□□□□ 0.77
Ccdc28a-205ENSMUST00000174592 Kdm5dQ62240 1548 aa19.71■□□□□ 0.75
Ccdc28a-205ENSMUST00000174592 Sycp2Q9CUU3 1500 aa19.49■□□□□ 0.71
Ccdc28a-205ENSMUST00000174592 BicraF8VPZ9 1578 aa19.31■□□□□ 0.68
Ccdc28a-205ENSMUST00000174592 Thoc2B1AZI6 1594 aaKnown RBP19.03■□□□□ 0.64
Ccdc28a-205ENSMUST00000174592 Dcaf1Q80TR8 1506 aa19.03■□□□□ 0.64
Ccdc28a-205ENSMUST00000174592 Pds5bQ4VA53 1446 aaKnown RBP19.02■□□□□ 0.64
Ccdc28a-205ENSMUST00000174592 Dnajc5P60904 198 aa18.89■□□□□ 0.61
Ccdc28a-205ENSMUST00000174592 Cc2d2aQ8CFW7 1633 aa18.74■□□□□ 0.59
Ccdc28a-205ENSMUST00000174592 Atad2bE9Q166 1460 aaKnown RBP18.66■□□□□ 0.58
Ccdc28a-205ENSMUST00000174592 Ercc6F8VPZ5 1481 aa18.58■□□□□ 0.57
Ccdc28a-205ENSMUST00000174592 Rb1cc1Q9ESK9 1588 aa18.57■□□□□ 0.56
Ccdc28a-205ENSMUST00000174592 Trim41Q5NCC3 630 aa18.49■□□□□ 0.55
Ccdc28a-205ENSMUST00000174592 Fam135aQ6NS59 1506 aa18.47■□□□□ 0.55
Ccdc28a-205ENSMUST00000174592 Smarca2Q6DIC0 1577 aa18.34■□□□□ 0.53
Ccdc28a-205ENSMUST00000174592 Crybg2B7ZCC2 1516 aa18.31■□□□□ 0.52
Ccdc28a-205ENSMUST00000174592 Phldb1Q6PDH0 1371 aaKnown RBP18.29■□□□□ 0.52
Ccdc28a-205ENSMUST00000174592 Baz1bQ9Z277 1479 aa18.26■□□□□ 0.51
Ccdc28a-205ENSMUST00000174592 Baz1aO88379 1555 aa18.25■□□□□ 0.51
Ccdc28a-205ENSMUST00000174592 Ubl4bQ9CQ84 188 aa18.24■□□□□ 0.51
Ccdc28a-205ENSMUST00000174592 Zcchc6Q5BLK4 1491 aaKnown RBP18.2■□□□□ 0.5
Ccdc28a-205ENSMUST00000174592 Iqgap2Q3UQ44 1575 aa18.18■□□□□ 0.5
Ccdc28a-205ENSMUST00000174592 Smarca4Q3TKT4 1613 aaKnown RBP18.17■□□□□ 0.5
Ccdc28a-205ENSMUST00000174592 Frmpd1A2AKB4 1549 aa18.15■□□□□ 0.5
Ccdc28a-205ENSMUST00000174592 Wdr62Q3U3T8 1523 aa18.14■□□□□ 0.49
Ccdc28a-205ENSMUST00000174592 Mrc2Q64449 1479 aa18.1■□□□□ 0.49
Ccdc28a-205ENSMUST00000174592 Ccdc180J3QNE4 1664 aa18.03■□□□□ 0.48
Ccdc28a-205ENSMUST00000174592 Rhox8Q6VSS7 320 aa17.94■□□□□ 0.46
Ccdc28a-205ENSMUST00000174592 Cecr2E9Q2Z1 1453 aa17.94■□□□□ 0.46
Ccdc28a-205ENSMUST00000174592 Unc13aQ4KUS2 1712 aa17.74■□□□□ 0.43
Ccdc28a-205ENSMUST00000174592 Rsf1E9PWW9 1441 aaKnown RBP17.72■□□□□ 0.43
Ccdc28a-205ENSMUST00000174592 Shroom2A2ALU4 1481 aa17.7■□□□□ 0.42
Ccdc28a-205ENSMUST00000174592 Lrriq1Q0P5X1 1673 aa17.7■□□□□ 0.42
Ccdc28a-205ENSMUST00000174592 Col17a1Q07563 1470 aa17.63■□□□□ 0.41
Ccdc28a-205ENSMUST00000174592 Pabpn1Q8CCS6 302 aaKnown RBP17.52■□□□□ 0.4
Ccdc28a-205ENSMUST00000174592 Cux2P70298 1426 aa17.47■□□□□ 0.39
Ccdc28a-205ENSMUST00000174592 Eif4g3Q80XI3 1579 aaKnown RBP17.44■□□□□ 0.38
Ccdc28a-205ENSMUST00000174592 Kif21aQ9QXL2 1672 aa17.4■□□□□ 0.38
Ccdc28a-205ENSMUST00000174592 CftrP26361 1476 aa17.39■□□□□ 0.37
Ccdc28a-205ENSMUST00000174592 Top2bQ64511 1612 aa17.38■□□□□ 0.37
Ccdc28a-205ENSMUST00000174592 Pelp1Q9DBD5 1123 aaKnown RBP17.35■□□□□ 0.37
Ccdc28a-205ENSMUST00000174592 Kif15Q6P9L6 1387 aa17.33■□□□□ 0.36
Ccdc28a-205ENSMUST00000174592 Npm1Q61937 292 aaKnown RBP17.33■□□□□ 0.36
Ccdc28a-205ENSMUST00000174592 Cttnbp2B9EJA2 1648 aa17.32■□□□□ 0.36
Ccdc28a-205ENSMUST00000174592 Pcdh10E9PXQ7 1057 aa17.29■□□□□ 0.36
Ccdc28a-205ENSMUST00000174592 Synj1Q8CHC4 1574 aa17.24■□□□□ 0.35
Ccdc28a-205ENSMUST00000174592 Esf1Q3V1V3 845 aaKnown RBP17.21■□□□□ 0.35
Ccdc28a-205ENSMUST00000174592 Zcchc11B2RX14 1644 aaKnown RBP17.21■□□□□ 0.35
Ccdc28a-205ENSMUST00000174592 Urb2E9Q7L1 1524 aaKnown RBP17.19■□□□□ 0.34
Ccdc28a-205ENSMUST00000174592 Plb1Q3TTY0 1478 aa17.18■□□□□ 0.34
Ccdc28a-205ENSMUST00000174592 Brd4Q9ESU6 1400 aaKnown RBP17.17■□□□□ 0.34
Ccdc28a-205ENSMUST00000174592 Cep164Q5DU05 1446 aa17.14■□□□□ 0.33
Ccdc28a-205ENSMUST00000174592 Ttbk1Q6PCN3 1308 aa17.08■□□□□ 0.32
Ccdc28a-205ENSMUST00000174592 Arhgef5E9Q7D5 1581 aa17.06■□□□□ 0.32
Ccdc28a-205ENSMUST00000174592 Dhx29Q6PGC1 1365 aaKnown RBP17.04■□□□□ 0.32
Ccdc28a-205ENSMUST00000174592 Lamc3Q9R0B6 1581 aa17.01■□□□□ 0.31
Ccdc28a-205ENSMUST00000174592 Il27Q8K3I6 234 aa16.97■□□□□ 0.31
Ccdc28a-205ENSMUST00000174592 Rusc2Q80U22 1514 aa16.96■□□□□ 0.31
Ccdc28a-205ENSMUST00000174592 Adgrl3Q80TS3 1537 aa16.95■□□□□ 0.3
Ccdc28a-205ENSMUST00000174592 Ccdc136Q3TVA9 1136 aa16.93■□□□□ 0.3
Ccdc28a-205ENSMUST00000174592 Ift140E9PY46 1464 aa16.92■□□□□ 0.3
Ccdc28a-205ENSMUST00000174592 LrpprcQ6PB66 1392 aaKnown RBP16.89■□□□□ 0.3
Ccdc28a-205ENSMUST00000174592 Crocc2F6XLV1 1638 aa16.88■□□□□ 0.29
Ccdc28a-205ENSMUST00000174592 Ccdc18Q640L5 1455 aa16.86■□□□□ 0.29
Ccdc28a-205ENSMUST00000174592 Gm156Q58A37 223 aa16.86■□□□□ 0.29
Ccdc28a-205ENSMUST00000174592 PtprkP35822 1457 aa16.85■□□□□ 0.29
Ccdc28a-205ENSMUST00000174592 PtprtQ99M80 1454 aa16.83■□□□□ 0.28
Ccdc28a-205ENSMUST00000174592 Plekhg3Q4VAC9 1341 aa16.76■□□□□ 0.27
Ccdc28a-205ENSMUST00000174592 Cep170Q6A065 1588 aa16.74■□□□□ 0.27
Ccdc28a-205ENSMUST00000174592 Gapvd1Q6PAR5 1458 aa16.73■□□□□ 0.27
Ccdc28a-205ENSMUST00000174592 PogzQ8BZH4 1409 aaKnown RBP16.7■□□□□ 0.26
Ccdc28a-205ENSMUST00000174592 Disp1Q3TDN0 1521 aa16.67■□□□□ 0.26
Ccdc28a-205ENSMUST00000174592 Cc2d2bA0A286YDU8 1405 aa16.66■□□□□ 0.26
Ccdc28a-205ENSMUST00000174592 Fgd6Q69ZL1 1399 aa16.64■□□□□ 0.25
Ccdc28a-205ENSMUST00000174592 Golga3P55937 1487 aa16.62■□□□□ 0.25
Ccdc28a-205ENSMUST00000174592 Camsap1A2AHC3 1581 aa16.62■□□□□ 0.25
Ccdc28a-205ENSMUST00000174592 Rtl1Q7M732 1744 aa16.62■□□□□ 0.25
Ccdc28a-205ENSMUST00000174592 Duox2A2AQ99 1517 aa16.6■□□□□ 0.25
Ccdc28a-205ENSMUST00000174592 Nup160Q9Z0W3 1402 aaKnown RBP16.6■□□□□ 0.25
Ccdc28a-205ENSMUST00000174592 Pprc1Q6NZN1 1644 aa16.56■□□□□ 0.24
Ccdc28a-205ENSMUST00000174592 Ppp1r18Q8BQ30 594 aa16.56■□□□□ 0.24
Ccdc28a-205ENSMUST00000174592 TnnQ80Z71 1560 aa16.55■□□□□ 0.24
Ccdc28a-205ENSMUST00000174592 Ythdc2B2RR83 1445 aaKnown RBP16.53■□□□□ 0.24
Ccdc28a-205ENSMUST00000174592 AknaQ80VW7 1404 aa16.52■□□□□ 0.23
Ccdc28a-205ENSMUST00000174592 Rapgef2Q8CHG7 1496 aa16.5■□□□□ 0.23
Ccdc28a-205ENSMUST00000174592 Pbrm1Q8BSQ9 1634 aaKnown RBP16.49■□□□□ 0.23
Ccdc28a-205ENSMUST00000174592 AqrQ8CFQ3 1481 aaKnown RBP16.48■□□□□ 0.23
Ccdc28a-205ENSMUST00000174592 Setd1bQ8CFT2 1985 aa16.47■□□□□ 0.23
Ccdc28a-205ENSMUST00000174592 Abcc1O35379 1528 aa16.47■□□□□ 0.23
Ccdc28a-205ENSMUST00000174592 CadpsQ80TJ1 1355 aa16.42■□□□□ 0.22
Ccdc28a-205ENSMUST00000174592 Samd9lQ69Z37 1561 aa16.4■□□□□ 0.22
Ccdc28a-205ENSMUST00000174592 Setbp1Q9Z180 1582 aa16.38■□□□□ 0.21
Ccdc28a-205ENSMUST00000174592 Grin2aP35436 1464 aa16.38■□□□□ 0.21
Ccdc28a-205ENSMUST00000174592 Rad54l2Q99NG0 1466 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms