Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm25239-201ENSMUST00000174915 86 ntBASIC48,74■■■■■ 5,39
Col5a2Q3U962 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC45,37■■■■■ 4,85
Col5a2Q3U962 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC44,5■■■■■ 4,71
Col5a2Q3U962 Gm24109-201ENSMUST00000175489 103 ntBASIC42,66■■■■■ 4,42
Col5a2Q3U962 Gm15042-201ENSMUST00000120212 883 ntBASIC42,04■■■■■ 4,32
Col5a2Q3U962 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC41,24■■■■■ 4,19
Col5a2Q3U962 Gm15045-201ENSMUST00000117359 883 ntBASIC41,16■■■■■ 4,18
Col5a2Q3U962 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC40,89■■■■■ 4,14
Col5a2Q3U962 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40,85■■■■■ 4,13
Col5a2Q3U962 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC40,81■■■■■ 4,12
Col5a2Q3U962 Gm23366-201ENSMUST00000175022 89 ntBASIC40,58■■■■■ 4,09
Col5a2Q3U962 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39,81■■■■□ 3,96
Col5a2Q3U962 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC39,48■■■■□ 3,91
Col5a2Q3U962 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC39,45■■■■□ 3,91
Col5a2Q3U962 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC39,41■■■■□ 3,9
Col5a2Q3U962 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39,24■■■■□ 3,87
Col5a2Q3U962 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC39,12■■■■□ 3,85
Col5a2Q3U962 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39,08■■■■□ 3,85
Col5a2Q3U962 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38,86■■■■□ 3,81
Col5a2Q3U962 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38,82■■■■□ 3,8
Col5a2Q3U962 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38,72■■■■□ 3,79
Col5a2Q3U962 Gm25238-201ENSMUST00000174914 89 ntBASIC38,67■■■■□ 3,78
Col5a2Q3U962 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC38,65■■■■□ 3,78
Col5a2Q3U962 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38,39■■■■□ 3,74
Col5a2Q3U962 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37,98■■■■□ 3,67
Col5a2Q3U962 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37,94■■■■□ 3,66
Col5a2Q3U962 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37,72■■■■□ 3,63
Col5a2Q3U962 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37,71■■■■□ 3,63
Col5a2Q3U962 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC37,68■■■■□ 3,62
Col5a2Q3U962 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37,63■■■■□ 3,61
Col5a2Q3U962 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37,51■■■■□ 3,59
Col5a2Q3U962 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37,43■■■■□ 3,58
Col5a2Q3U962 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC37,41■■■■□ 3,58
Col5a2Q3U962 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC37,32■■■■□ 3,56
Col5a2Q3U962 Gm25262-201ENSMUST00000174934 133 ntBASIC37,2■■■■□ 3,54
Col5a2Q3U962 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37,16■■■■□ 3,54
Col5a2Q3U962 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37,14■■■■□ 3,54
Col5a2Q3U962 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37,11■■■■□ 3,53
Col5a2Q3U962 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37,01■■■■□ 3,52
Col5a2Q3U962 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36,92■■■■□ 3,5
Col5a2Q3U962 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC36,89■■■■□ 3,5
Col5a2Q3U962 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36,83■■■■□ 3,49
Col5a2Q3U962 Gm27325-201ENSMUST00000175467 74 ntBASIC36,75■■■■□ 3,47
Col5a2Q3U962 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC36,66■■■■□ 3,46
Col5a2Q3U962 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC36,65■■■■□ 3,46
Col5a2Q3U962 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36,63■■■■□ 3,45
Col5a2Q3U962 Gm26115-201ENSMUST00000175605 87 ntBASIC36,52■■■■□ 3,44
Col5a2Q3U962 Rab21-202ENSMUST00000218831 843 ntBASIC36,45■■■■□ 3,43
Col5a2Q3U962 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC36,38■■■■□ 3,41
Col5a2Q3U962 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC36,37■■■■□ 3,41
Col5a2Q3U962 Gm8109-201ENSMUST00000194076 746 ntBASIC36,31■■■■□ 3,4
Col5a2Q3U962 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC36,3■■■■□ 3,4
Col5a2Q3U962 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36,28■■■■□ 3,4
Col5a2Q3U962 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36,25■■■■□ 3,39
Col5a2Q3U962 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC36,19■■■■□ 3,38
Col5a2Q3U962 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC36,16■■■■□ 3,38
Col5a2Q3U962 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36,15■■■■□ 3,38
Col5a2Q3U962 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36,08■■■■□ 3,37
Col5a2Q3U962 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36,06■■■■□ 3,36
Col5a2Q3U962 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36,01■■■■□ 3,36
Col5a2Q3U962 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35,95■■■■□ 3,35
Col5a2Q3U962 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35,93■■■■□ 3,34
Col5a2Q3U962 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35,93■■■■□ 3,34
Col5a2Q3U962 Psd-208ENSMUST00000224556 2034 ntBASIC35,84■■■■□ 3,33
Col5a2Q3U962 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35,77■■■■□ 3,32
Col5a2Q3U962 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35,69■■■■□ 3,3
Col5a2Q3U962 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35,67■■■■□ 3,3
Col5a2Q3U962 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC35,54■■■■□ 3,28
Col5a2Q3U962 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC35,53■■■■□ 3,28
Col5a2Q3U962 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35,47■■■■□ 3,27
Col5a2Q3U962 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35,46■■■■□ 3,27
Col5a2Q3U962 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC35,41■■■■□ 3,26
Col5a2Q3U962 Gm17082-201ENSMUST00000166043 1091 ntBASIC35,41■■■■□ 3,26
Col5a2Q3U962 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35,37■■■■□ 3,25
Col5a2Q3U962 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35,31■■■■□ 3,24
Col5a2Q3U962 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35,28■■■■□ 3,24
Col5a2Q3U962 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35,27■■■■□ 3,24
Col5a2Q3U962 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35,24■■■■□ 3,23
Col5a2Q3U962 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35,2■■■■□ 3,23
Col5a2Q3U962 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35,18■■■■□ 3,22
Col5a2Q3U962 Gm24804-201ENSMUST00000174982 85 ntBASIC35,16■■■■□ 3,22
Col5a2Q3U962 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35,03■■■■□ 3,2
Col5a2Q3U962 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35,03■■■■□ 3,2
Col5a2Q3U962 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35,01■■■■□ 3,19
Col5a2Q3U962 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34,88■■■■□ 3,17
Col5a2Q3U962 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC34,87■■■■□ 3,17
Col5a2Q3U962 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34,85■■■■□ 3,17
Col5a2Q3U962 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC34,84■■■■□ 3,17
Col5a2Q3U962 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34,81■■■■□ 3,16
Col5a2Q3U962 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC34,8■■■■□ 3,16
Col5a2Q3U962 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34,78■■■■□ 3,16
Col5a2Q3U962 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34,75■■■■□ 3,15
Col5a2Q3U962 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34,74■■■■□ 3,15
Col5a2Q3U962 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC34,73■■■■□ 3,15
Col5a2Q3U962 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34,73■■■■□ 3,15
Col5a2Q3U962 Gm27322-201ENSMUST00000184007 104 ntBASIC34,71■■■■□ 3,15
Col5a2Q3U962 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC34,7■■■■□ 3,15
Col5a2Q3U962 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34,68■■■■□ 3,14
Col5a2Q3U962 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC34,66■■■■□ 3,14
Col5a2Q3U962 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34,57■■■■□ 3,13
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms