Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm25239-201ENSMUST00000174915 86 ntBASIC48.2■■■■■ 5.31
Scn9aQ62205 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC44.93■■■■■ 4.78
Scn9aQ62205 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC44.02■■■■■ 4.64
Scn9aQ62205 Gm24109-201ENSMUST00000175489 103 ntBASIC42.15■■■■■ 4.34
Scn9aQ62205 Gm15042-201ENSMUST00000120212 883 ntBASIC41.54■■■■■ 4.24
Scn9aQ62205 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40.79■■■■■ 4.12
Scn9aQ62205 Gm15045-201ENSMUST00000117359 883 ntBASIC40.7■■■■■ 4.11
Scn9aQ62205 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC40.55■■■■■ 4.08
Scn9aQ62205 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
Scn9aQ62205 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
Scn9aQ62205 Gm23366-201ENSMUST00000175022 89 ntBASIC40.1■■■■■ 4.01
Scn9aQ62205 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39.46■■■■□ 3.91
Scn9aQ62205 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Scn9aQ62205 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC39.02■■■■□ 3.84
Scn9aQ62205 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC39■■■■□ 3.83
Scn9aQ62205 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Scn9aQ62205 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Scn9aQ62205 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
Scn9aQ62205 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
Scn9aQ62205 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
Scn9aQ62205 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38.36■■■■□ 3.73
Scn9aQ62205 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
Scn9aQ62205 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC38.24■■■■□ 3.71
Scn9aQ62205 Gm25238-201ENSMUST00000174914 89 ntBASIC38.24■■■■□ 3.71
Scn9aQ62205 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.03■■■■□ 3.68
Scn9aQ62205 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.53■■■■□ 3.6
Scn9aQ62205 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37.48■■■■□ 3.59
Scn9aQ62205 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Scn9aQ62205 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.36■■■■□ 3.57
Scn9aQ62205 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
Scn9aQ62205 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Scn9aQ62205 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC37.16■■■■□ 3.54
Scn9aQ62205 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Scn9aQ62205 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.94■■■■□ 3.5
Scn9aQ62205 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.92■■■■□ 3.5
Scn9aQ62205 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.88■■■■□ 3.5
Scn9aQ62205 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.88■■■■□ 3.49
Scn9aQ62205 Gm25262-201ENSMUST00000174934 133 ntBASIC36.78■■■■□ 3.48
Scn9aQ62205 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.73■■■■□ 3.47
Scn9aQ62205 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Scn9aQ62205 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Scn9aQ62205 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36.47■■■■□ 3.43
Scn9aQ62205 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.4■■■■□ 3.42
Scn9aQ62205 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC36.4■■■■□ 3.42
Scn9aQ62205 Gm27325-201ENSMUST00000175467 74 ntBASIC36.33■■■■□ 3.41
Scn9aQ62205 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Scn9aQ62205 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC36.27■■■■□ 3.4
Scn9aQ62205 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
Scn9aQ62205 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC36.21■■■■□ 3.39
Scn9aQ62205 Psd-208ENSMUST00000224556 2034 ntBASIC36.19■■■■□ 3.38
Scn9aQ62205 Gm26115-201ENSMUST00000175605 87 ntBASIC36.17■■■■□ 3.38
Scn9aQ62205 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC36.11■■■■□ 3.37
Scn9aQ62205 Gm8109-201ENSMUST00000194076 746 ntBASIC36■■■■□ 3.35
Scn9aQ62205 Rab21-202ENSMUST00000218831 843 ntBASIC35.99■■■■□ 3.35
Scn9aQ62205 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.95■■■■□ 3.34
Scn9aQ62205 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Scn9aQ62205 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.87■■■■□ 3.33
Scn9aQ62205 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
Scn9aQ62205 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
Scn9aQ62205 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Scn9aQ62205 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Scn9aQ62205 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35.64■■■■□ 3.3
Scn9aQ62205 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Scn9aQ62205 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35.49■■■■□ 3.27
Scn9aQ62205 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35.42■■■■□ 3.26
Scn9aQ62205 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
Scn9aQ62205 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.38■■■■□ 3.25
Scn9aQ62205 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Scn9aQ62205 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.17■■■■□ 3.22
Scn9aQ62205 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC35.16■■■■□ 3.22
Scn9aQ62205 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
Scn9aQ62205 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.15■■■■□ 3.22
Scn9aQ62205 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Scn9aQ62205 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Scn9aQ62205 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Scn9aQ62205 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Scn9aQ62205 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.99■■■■□ 3.19
Scn9aQ62205 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Scn9aQ62205 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Scn9aQ62205 Gm17082-201ENSMUST00000166043 1091 ntBASIC34.94■■■■□ 3.18
Scn9aQ62205 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Scn9aQ62205 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Scn9aQ62205 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.89■■■■□ 3.18
Scn9aQ62205 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Scn9aQ62205 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Scn9aQ62205 Gm24804-201ENSMUST00000174982 85 ntBASIC34.72■■■■□ 3.15
Scn9aQ62205 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.7■■■■□ 3.15
Scn9aQ62205 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Scn9aQ62205 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Scn9aQ62205 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.54■■■■□ 3.12
Scn9aQ62205 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.49■■■■□ 3.11
Scn9aQ62205 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.49■■■■□ 3.11
Scn9aQ62205 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
Scn9aQ62205 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Scn9aQ62205 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC34.45■■■■□ 3.11
Scn9aQ62205 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
Scn9aQ62205 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34.4■■■■□ 3.1
Scn9aQ62205 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Scn9aQ62205 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Scn9aQ62205 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34.36■■■■□ 3.09
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms