RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	RPT1	P33299	467 aa	Known RBP	5.49	□□□□□ -1.53
RSA1	YPL193W	BAP2	P38084	609 aa		5.49	□□□□□ -1.53
RSA1	YPL193W	WHI5	Q12416	295 aa		5.49	□□□□□ -1.53
RSA1	YPL193W	GAL10	P04397	699 aa		5.48	□□□□□ -1.53
RSA1	YPL193W	SNF5	P18480	905 aa		5.48	□□□□□ -1.53
RSA1	YPL193W	PIK1	P39104	1066 aa		5.48	□□□□□ -1.53
RSA1	YPL193W	YFL054C	P43549	646 aa		5.48	□□□□□ -1.53
RSA1	YPL193W	PPX1	P38698	397 aa		5.47	□□□□□ -1.53
RSA1	YPL193W	RAT1	Q02792	1006 aa	Known RBP	5.47	□□□□□ -1.53
RSA1	YPL193W	RSM24	Q03976	319 aa		5.47	□□□□□ -1.53
RSA1	YPL193W	HXK1	P04806	485 aa	Known RBP	5.46	□□□□□ -1.54
RSA1	YPL193W	RFC5	P38251	354 aa		5.46	□□□□□ -1.54
RSA1	YPL193W	SSF1	P38789	453 aa	Predicted RBP	5.46	□□□□□ -1.54
RSA1	YPL193W	ROD1	Q02805	837 aa		5.46	□□□□□ -1.54
RSA1	YPL193W	DUS4	Q06063	367 aa		5.46	□□□□□ -1.54
RSA1	YPL193W	MSC6	Q08818	692 aa	Known RBP	5.46	□□□□□ -1.54
RSA1	YPL193W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
RSA1	YPL193W	SRM1	P21827	482 aa		5.44	□□□□□ -1.54
RSA1	YPL193W	TRM2	P33753	639 aa		5.44	□□□□□ -1.54
RSA1	YPL193W	STM1	P39015	273 aa	Known RBP	5.44	□□□□□ -1.54
RSA1	YPL193W	TMA10	Q06177	86 aa		5.44	□□□□□ -1.54
RSA1	YPL193W	RXT3	Q07458	294 aa		5.44	□□□□□ -1.54
RSA1	YPL193W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.44	□□□□□ -1.54	not detected
RSA1	YPL193W	YPL260W	Q08977	551 aa		5.44	□□□□□ -1.54
RSA1	YPL193W	RPN3	P40016	523 aa	Known RBP	5.43	□□□□□ -1.54
RSA1	YPL193W	MCM6	P53091	1017 aa	Known RBP	5.43	□□□□□ -1.54
RSA1	YPL193W	GTF1	P53260	183 aa	Predicted RBP	5.43	□□□□□ -1.54
RSA1	YPL193W	GPB1	Q08886	897 aa		5.43	□□□□□ -1.54
RSA1	YPL193W	CDC20	P26309	610 aa		5.42	□□□□□ -1.54
RSA1	YPL193W	ACK1	Q07622	623 aa	Predicted RBP	5.42	□□□□□ -1.54
RSA1	YPL193W	PUS9	Q12069	462 aa		5.42	□□□□□ -1.54
RSA1	YPL193W	HCM1	P25364	564 aa		5.41	□□□□□ -1.54
RSA1	YPL193W	APL1	P27351	700 aa		5.41	□□□□□ -1.54
RSA1	YPL193W	DOM34	P33309	386 aa		5.41	□□□□□ -1.54
RSA1	YPL193W	LST4	P34239	828 aa		5.41	□□□□□ -1.54
RSA1	YPL193W	MRPS18	P42847	217 aa		5.41	□□□□□ -1.54
RSA1	YPL193W	SVS1	Q12254	260 aa		5.41	□□□□□ -1.54
RSA1	YPL193W	TAD3	Q9URQ3	322 aa		5.41	□□□□□ -1.54
RSA1	YPL193W	YER152C	P10356	443 aa		5.4	□□□□□ -1.54
RSA1	YPL193W	PRE9	P23638	258 aa	Known RBP	5.4	□□□□□ -1.54
RSA1	YPL193W	MKK2	P32491	506 aa		5.4	□□□□□ -1.54
RSA1	YPL193W	MSE1	P48525	536 aa		5.4	□□□□□ -1.54
RSA1	YPL193W	GCV2	P49095	1034 aa		5.4	□□□□□ -1.54
RSA1	YPL193W	RIB2	Q12362	591 aa	Known RBP	5.4	□□□□□ -1.54
RSA1	YPL193W	MLS1	P30952	554 aa		5.39	□□□□□ -1.55
RSA1	YPL193W	MNN10	P50108	393 aa	Known RBP	5.39	□□□□□ -1.55
RSA1	YPL193W	SUN4	P53616	420 aa		5.39	□□□□□ -1.55
RSA1	YPL193W	KIN2	P13186	1147 aa	Known RBP	5.38	□□□□□ -1.55
RSA1	YPL193W	PBP1	P53297	722 aa	Known RBP	5.38	□□□□□ -1.55
RSA1	YPL193W	YAP6	Q03935	383 aa		5.38	□□□□□ -1.55
RSA1	YPL193W	MRL1	Q06815	381 aa		5.38	□□□□□ -1.55
RSA1	YPL193W	MCD1	Q12158	566 aa		5.38	□□□□□ -1.55
RSA1	YPL193W	TAF13	P11747	167 aa		5.37	□□□□□ -1.55
RSA1	YPL193W	IPL1	P38991	367 aa		5.37	□□□□□ -1.55
RSA1	YPL193W	PHO23	P50947	330 aa		5.37	□□□□□ -1.55
RSA1	YPL193W	SLI1	P53304	468 aa		5.37	□□□□□ -1.55
RSA1	YPL193W	SIW14	P53965	281 aa		5.37	□□□□□ -1.55
RSA1	YPL193W	CDC6	P09119	513 aa		5.36	□□□□□ -1.55
RSA1	YPL193W	SYP1	P25623	870 aa	Known RBP	5.36	□□□□□ -1.55
RSA1	YPL193W	SEC8	P32855	1065 aa		5.36	□□□□□ -1.55
RSA1	YPL193W	YGR122W	P53272	402 aa		5.36	□□□□□ -1.55
RSA1	YPL193W	EMC1	P25574	760 aa		5.35	□□□□□ -1.55
RSA1	YPL193W	RGD1	P38339	666 aa		5.35	□□□□□ -1.55
RSA1	YPL193W	RPS26A	P39938	119 aa	Known RBP	5.35	□□□□□ -1.55
RSA1	YPL193W	RPS26B	P39939	119 aa	Known RBP	5.35	□□□□□ -1.55
RSA1	YPL193W	NTO1	Q12311	748 aa		5.35	□□□□□ -1.55
RSA1	YPL193W	RAD2	P07276	1031 aa		5.34	□□□□□ -1.55
RSA1	YPL193W	YLR224W	Q05947	369 aa		5.34	□□□□□ -1.55
RSA1	YPL193W	BAS1	P22035	811 aa		5.33	□□□□□ -1.56
RSA1	YPL193W	STE11	P23561	717 aa		5.33	□□□□□ -1.56
RSA1	YPL193W	SEC20	P28791	383 aa		5.33	□□□□□ -1.56
RSA1	YPL193W	HXT13	P39924	564 aa		5.33	□□□□□ -1.56
RSA1	YPL193W	AIM21	P40563	679 aa		5.33	□□□□□ -1.56
RSA1	YPL193W	CNN1	P43618	361 aa		5.33	□□□□□ -1.56
RSA1	YPL193W	VPS62	P53285	467 aa		5.33	□□□□□ -1.56
RSA1	YPL193W	HXT17	P53631	564 aa		5.33	□□□□□ -1.56
RSA1	YPL193W	HXT15	P54854	567 aa		5.33	□□□□□ -1.56
RSA1	YPL193W	GCR1	P07261	785 aa		5.32	□□□□□ -1.56
RSA1	YPL193W	MXR1	P40029	184 aa		5.32	□□□□□ -1.56
RSA1	YPL193W	DBP5	P20449	482 aa	Known RBP	5.31	□□□□□ -1.56
RSA1	YPL193W	MCM2	P29469	868 aa		5.31	□□□□□ -1.56
RSA1	YPL193W	HMI1	Q12039	706 aa		5.31	□□□□□ -1.56
RSA1	YPL193W	CYC8	P14922	966 aa		5.3	□□□□□ -1.56
RSA1	YPL193W	PMI40	P29952	429 aa	Known RBP	5.3	□□□□□ -1.56
RSA1	YPL193W	UGA2	P38067	497 aa		5.3	□□□□□ -1.56
RSA1	YPL193W	MCM7	P38132	845 aa		5.3	□□□□□ -1.56
RSA1	YPL193W	GNP1	P48813	663 aa		5.3	□□□□□ -1.56
RSA1	YPL193W	PEP7	P32609	515 aa		5.29	□□□□□ -1.56
RSA1	YPL193W	MSC2	Q03455	724 aa		5.29	□□□□□ -1.56
RSA1	YPL193W	SIZ1	Q04195	904 aa		5.29	□□□□□ -1.56
RSA1	YPL193W	PLB1	P39105	664 aa		5.28	□□□□□ -1.56
RSA1	YPL193W	MPH1	P40562	993 aa		5.28	□□□□□ -1.56
RSA1	YPL193W	ENT3	P47160	408 aa		5.28	□□□□□ -1.56
RSA1	YPL193W	CTF4	Q01454	927 aa		5.28	□□□□□ -1.56
RSA1	YPL193W	BI4	P03879	638 aa		5.27	□□□□□ -1.57
RSA1	YPL193W	PMA1	P05030	918 aa	Known RBP	5.27	□□□□□ -1.57
RSA1	YPL193W	ACE2	P21192	770 aa		5.27	□□□□□ -1.57
RSA1	YPL193W	KIN4	Q01919	800 aa		5.27	□□□□□ -1.57
RSA1	YPL193W	ATG13	Q06628	738 aa		5.27	□□□□□ -1.57
RSA1	YPL193W	RPL11A	P0C0W9	174 aa	Known RBP	5.26	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms