RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W MCM6P53091 1017 aaKnown RBP4.33□□□□□ -1.72
PEP12YOR036W ACK1Q07622 623 aaPredicted RBP4.33□□□□□ -1.72
PEP12YOR036W PTC5Q12511 572 aa4.33□□□□□ -1.72
PEP12YOR036W STE11P23561 717 aa4.32□□□□□ -1.72
PEP12YOR036W CDC3P32457 520 aaKnown RBP4.32□□□□□ -1.72
PEP12YOR036W VPS35P34110 944 aa4.32□□□□□ -1.72
PEP12YOR036W ALG3P38179 458 aa4.32□□□□□ -1.72
PEP12YOR036W YFL054CP43549 646 aa4.32□□□□□ -1.72
PEP12YOR036W MNN10P50108 393 aaKnown RBP4.32□□□□□ -1.72
PEP12YOR036W RXT3Q07458 294 aa4.32□□□□□ -1.72
PEP12YOR036W PHO23P50947 330 aa4.31□□□□□ -1.72
PEP12YOR036W YPL109CQ02981 657 aa4.31□□□□□ -1.72
PEP12YOR036W ADI1Q03677 179 aa4.31□□□□□ -1.72
PEP12YOR036W GPB1Q08886 897 aa4.31□□□□□ -1.72
PEP12YOR036W HAT1Q12341 374 aa4.31□□□□□ -1.72
PEP12YOR036W DED1P06634 604 aaKnown RBP4.3□□□□□ -1.72
PEP12YOR036W SSA1P10591 642 aaKnown RBP4.3□□□□□ -1.72
PEP12YOR036W PMI40P29952 429 aaKnown RBP4.3□□□□□ -1.72
PEP12YOR036W CHS7P38843 316 aa4.3□□□□□ -1.72
PEP12YOR036W RPN3P40016 523 aaKnown RBP4.3□□□□□ -1.72
PEP12YOR036W AIM21P40563 679 aa4.3□□□□□ -1.72
PEP12YOR036W DAK2P43550 591 aa4.3□□□□□ -1.72
PEP12YOR036W RSM24Q03976 319 aa4.3□□□□□ -1.72
PEP12YOR036W RAD53P22216 821 aa4.29□□□□□ -1.72
PEP12YOR036W GCD6P32501 712 aaKnown RBP4.29□□□□□ -1.72
PEP12YOR036W RFC5P38251 354 aa4.29□□□□□ -1.72
PEP12YOR036W YHL050CP38721 697 aa4.29□□□□□ -1.72
PEP12YOR036W YHR219WP38900 624 aa4.29□□□□□ -1.72
PEP12YOR036W FAA3P39002 694 aa4.29□□□□□ -1.72
PEP12YOR036W CTF4Q01454 927 aa4.29□□□□□ -1.72
PEP12YOR036W YAP6Q03935 383 aa4.29□□□□□ -1.72
PEP12YOR036W PIC2P40035 300 aa4.28□□□□□ -1.72
PEP12YOR036W VPS62P53285 467 aa4.28□□□□□ -1.72
PEP12YOR036W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
PEP12YOR036W YPL260WQ08977 551 aa4.28□□□□□ -1.72
PEP12YOR036W MET4P32389 672 aa4.27□□□□□ -1.73
PEP12YOR036W KIN4Q01919 800 aa4.27□□□□□ -1.73
PEP12YOR036W RAT1Q02792 1006 aaKnown RBP4.27□□□□□ -1.73
PEP12YOR036W YML122CQ03207 126 aa4.27□□□□□ -1.73
PEP12YOR036W PMA1P05030 918 aaKnown RBP4.26□□□□□ -1.73
PEP12YOR036W GTF1P53260 183 aaPredicted RBP4.26□□□□□ -1.73
PEP12YOR036W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
PEP12YOR036W EMC1P25574 760 aa4.25□□□□□ -1.73
PEP12YOR036W GCV2P49095 1034 aa4.25□□□□□ -1.73
PEP12YOR036W ROD1Q02805 837 aa4.25□□□□□ -1.73
PEP12YOR036W YLR224WQ05947 369 aa4.25□□□□□ -1.73
PEP12YOR036W HMI1Q12039 706 aa4.25□□□□□ -1.73
PEP12YOR036W SVS1Q12254 260 aa4.25□□□□□ -1.73
PEP12YOR036W HXK1P04806 485 aaKnown RBP4.24□□□□□ -1.73
PEP12YOR036W DEF1P35732 738 aaKnown RBP4.24□□□□□ -1.73
PEP12YOR036W MSS4P38994 779 aa4.24□□□□□ -1.73
PEP12YOR036W PBP1P53297 722 aaKnown RBP4.24□□□□□ -1.73
PEP12YOR036W SIZ1Q04195 904 aa4.24□□□□□ -1.73
PEP12YOR036W OXR1Q08952 273 aa4.24□□□□□ -1.73
PEP12YOR036W APL1P27351 700 aa4.23□□□□□ -1.73
PEP12YOR036W DCG1P32460 244 aa4.23□□□□□ -1.73
PEP12YOR036W GEF1P37020 779 aa4.23□□□□□ -1.73
PEP12YOR036W YER152CP10356 443 aa4.22□□□□□ -1.73
PEP12YOR036W KIN2P13186 1147 aaKnown RBP4.22□□□□□ -1.73
PEP12YOR036W MKK2P32491 506 aa4.21□□□□□ -1.74
PEP12YOR036W SIP5P40210 489 aaKnown RBP4.21□□□□□ -1.74
PEP12YOR036W TAF13P11747 167 aa4.2□□□□□ -1.74
PEP12YOR036W PPX1P38698 397 aa4.2□□□□□ -1.74
PEP12YOR036W MSC2Q03455 724 aa4.2□□□□□ -1.74
PEP12YOR036W NOP12Q08208 459 aaKnown RBP4.2□□□□□ -1.74
PEP12YOR036W WHI5Q12416 295 aa4.2□□□□□ -1.74
PEP12YOR036W PLB1P39105 664 aa4.19□□□□□ -1.74
PEP12YOR036W HXT13P39924 564 aa4.19□□□□□ -1.74
PEP12YOR036W HXT17P53631 564 aa4.19□□□□□ -1.74
PEP12YOR036W SIW14P53965 281 aa4.19□□□□□ -1.74
PEP12YOR036W HXT15P54854 567 aa4.19□□□□□ -1.74
PEP12YOR036W URN1Q06525 465 aaKnown RBP4.19□□□□□ -1.74
PEP12YOR036W ATG13Q06628 738 aa4.19□□□□□ -1.74
PEP12YOR036W NOP8Q08287 484 aaPredicted RBP4.19□□□□□ -1.74
PEP12YOR036W MLS1P30952 554 aa4.18□□□□□ -1.74
PEP12YOR036W RPT1P33299 467 aaKnown RBP4.18□□□□□ -1.74
PEP12YOR036W RGD1P38339 666 aa4.18□□□□□ -1.74
PEP12YOR036W YML020WQ03722 664 aa4.18□□□□□ -1.74
PEP12YOR036W PPM2Q08282 695 aa4.18□□□□□ -1.74
PEP12YOR036W GNP1P48813 663 aa4.17□□□□□ -1.74
PEP12YOR036W BAS1P22035 811 aa4.16□□□□□ -1.74
PEP12YOR036W ACE2P21192 770 aa4.15□□□□□ -1.75
PEP12YOR036W PRE9P23638 258 aaKnown RBP4.15□□□□□ -1.75
PEP12YOR036W SYP1P25623 870 aaKnown RBP4.15□□□□□ -1.75
PEP12YOR036W PEP7P32609 515 aa4.15□□□□□ -1.75
PEP12YOR036W MOH1P38191 138 aa4.15□□□□□ -1.75
PEP12YOR036W MND2P40577 368 aa4.15□□□□□ -1.75
PEP12YOR036W ENT3P47160 408 aa4.15□□□□□ -1.75
PEP12YOR036W TPO1Q07824 586 aa4.15□□□□□ -1.75
PEP12YOR036W OAR1P35731 278 aa4.14□□□□□ -1.75
PEP12YOR036W MPH1P40562 993 aa4.14□□□□□ -1.75
PEP12YOR036W CNN1P43618 361 aa4.14□□□□□ -1.75
PEP12YOR036W ADY3Q07732 790 aa4.14□□□□□ -1.75
PEP12YOR036W MSC6Q08818 692 aaKnown RBP4.14□□□□□ -1.75
PEP12YOR036W BI4P03879 638 aa4.13□□□□□ -1.75
PEP12YOR036W DBP5P20449 482 aaKnown RBP4.13□□□□□ -1.75
PEP12YOR036W SEC8P32855 1065 aa4.13□□□□□ -1.75
PEP12YOR036W SSF1P38789 453 aaPredicted RBP4.13□□□□□ -1.75
PEP12YOR036W MXR1P40029 184 aa4.13□□□□□ -1.75
PEP12YOR036W MET12P46151 657 aa4.13□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms