RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W GDH3P39708 457 aa3.71□□□□□ -1.82
MSH2YOL090W NDE1P40215 560 aa3.71□□□□□ -1.82
MSH2YOL090W HXT8P40886 569 aa3.71□□□□□ -1.82
MSH2YOL090W SHE9Q04172 456 aa3.71□□□□□ -1.82
MSH2YOL090W RTP1Q12751 981 aa3.71□□□□□ -1.82
MSH2YOL090W SMC4Q12267 1418 aa3.71□□□□□ -1.82
MSH2YOL090W DUR3P33413 735 aa3.71□□□□□ -1.82
MSH2YOL090W HSP78P33416 811 aa3.71□□□□□ -1.82
MSH2YOL090W RKM3P38222 552 aa3.71□□□□□ -1.82
MSH2YOL090W SSN3P39073 555 aa3.71□□□□□ -1.82
MSH2YOL090W AIR1P40507 360 aaKnown RBP3.71□□□□□ -1.82
MSH2YOL090W ERP6P53198 216 aa3.71□□□□□ -1.82
MSH2YOL090W ADI1Q03677 179 aa3.71□□□□□ -1.82
MSH2YOL090W FLP1P03870 423 aa3.7□□□□□ -1.82
MSH2YOL090W VMA3P25515 160 aa3.7□□□□□ -1.82
MSH2YOL090W ARE1P25628 610 aa3.7□□□□□ -1.82
MSH2YOL090W HSE1P38753 452 aa3.7□□□□□ -1.82
MSH2YOL090W HXT13P39924 564 aa3.7□□□□□ -1.82
MSH2YOL090W UTP8P53276 713 aaKnown RBP3.7□□□□□ -1.82
MSH2YOL090W HXT17P53631 564 aa3.7□□□□□ -1.82
MSH2YOL090W HXT15P54854 567 aa3.7□□□□□ -1.82
MSH2YOL090W SAS4Q04003 481 aa3.7□□□□□ -1.82
MSH2YOL090W FAP7Q12055 197 aaPredicted RBP3.7□□□□□ -1.82
MSH2YOL090W TIF6Q12522 245 aaKnown RBP3.7□□□□□ -1.82
MSH2YOL090W TRP2P00899 507 aaKnown RBP3.7□□□□□ -1.82
MSH2YOL090W RAS1P01119 309 aa3.7□□□□□ -1.82
MSH2YOL090W HEM13P11353 328 aaKnown RBP3.7□□□□□ -1.82
MSH2YOL090W MRF1P30775 413 aaPredicted RBP3.7□□□□□ -1.82
MSH2YOL090W SMC1P32908 1225 aa3.7□□□□□ -1.82
MSH2YOL090W NMD3P38861 518 aaKnown RBP3.7□□□□□ -1.82
MSH2YOL090W KRE33P53914 1056 aaKnown RBP3.7□□□□□ -1.82
MSH2YOL090W YML131WQ03102 365 aa3.7□□□□□ -1.82
MSH2YOL090W PDR12Q02785 1511 aa3.7□□□□□ -1.82
MSH2YOL090W SSH4P32343 579 aa3.69□□□□□ -1.82
MSH2YOL090W VRP1P37370 817 aa3.69□□□□□ -1.82
MSH2YOL090W FRK1Q03002 865 aaPredicted RBP3.69□□□□□ -1.82
MSH2YOL090W WTM2Q12206 467 aa3.69□□□□□ -1.82
MSH2YOL090W CHC1P22137 1653 aaKnown RBP3.69□□□□□ -1.82
MSH2YOL090W SSN2P38931 1420 aa3.69□□□□□ -1.82
MSH2YOL090W SWI3P32591 825 aa3.69□□□□□ -1.82
MSH2YOL090W TRZ1P36159 838 aaPredicted RBP3.69□□□□□ -1.82
MSH2YOL090W BAP2P38084 609 aa3.69□□□□□ -1.82
MSH2YOL090W HUL4P40985 892 aa3.69□□□□□ -1.82
MSH2YOL090W MRL1Q06815 381 aa3.69□□□□□ -1.82
MSH2YOL090W GYP1Q08484 637 aa3.69□□□□□ -1.82
MSH2YOL090W MDM12Q92328 271 aa3.69□□□□□ -1.82
MSH2YOL090W DNF3Q12674 1656 aa3.69□□□□□ -1.82
MSH2YOL090W TY4B-PA0A0B7P3V8 1104 aa3.69□□□□□ -1.82
MSH2YOL090W TOP3P13099 656 aa3.69□□□□□ -1.82
MSH2YOL090W SLA1P32790 1244 aa3.69□□□□□ -1.82
MSH2YOL090W TYS1P36421 394 aaKnown RBP3.69□□□□□ -1.82
MSH2YOL090W RAD55P38953 406 aa3.69□□□□□ -1.82
MSH2YOL090W UTP7P40055 554 aaKnown RBP3.69□□□□□ -1.82
MSH2YOL090W MGS1P40151 587 aa3.69□□□□□ -1.82
MSH2YOL090W NTA1P40354 457 aa3.69□□□□□ -1.82
MSH2YOL090W RSC8P43609 557 aaKnown RBP3.69□□□□□ -1.82
MSH2YOL090W YLR225CQ05948 407 aaKnown RBP3.69□□□□□ -1.82
MSH2YOL090W TY4A-HQ6Q5P6 413 aa3.69□□□□□ -1.82
MSH2YOL090W INH1P01097 85 aa3.68□□□□□ -1.82
MSH2YOL090W MSN1P22148 382 aa3.68□□□□□ -1.82
MSH2YOL090W DBF20P32328 564 aa3.68□□□□□ -1.82
MSH2YOL090W MRP8P35719 219 aa3.68□□□□□ -1.82
MSH2YOL090W APL2P36000 726 aaPredicted RBP3.68□□□□□ -1.82
MSH2YOL090W PES4P39684 611 aa3.68□□□□□ -1.82
MSH2YOL090W XKS1P42826 600 aa3.68□□□□□ -1.82
MSH2YOL090W UBA2P52488 636 aa3.68□□□□□ -1.82
MSH2YOL090W SDA1P53313 767 aaKnown RBP3.68□□□□□ -1.82
MSH2YOL090W MTQ2Q03920 221 aaPredicted RBP3.68□□□□□ -1.82
MSH2YOL090W DFG5Q05031 458 aa3.68□□□□□ -1.82
MSH2YOL090W SSP2Q08646 371 aa3.68□□□□□ -1.82
MSH2YOL090W HOM3P10869 527 aa3.68□□□□□ -1.82
MSH2YOL090W MRS6P32864 603 aaKnown RBP3.68□□□□□ -1.82
MSH2YOL090W KTR4P38131 464 aa3.68□□□□□ -1.82
MSH2YOL090W APM2P38700 605 aa3.68□□□□□ -1.82
MSH2YOL090W YHL041WP38730 149 aa3.68□□□□□ -1.82
MSH2YOL090W PSY2P40164 858 aa3.68□□□□□ -1.82
MSH2YOL090W VIP1Q06685 1146 aaKnown RBP3.68□□□□□ -1.82
MSH2YOL090W REH1Q06709 432 aa3.68□□□□□ -1.82
MSH2YOL090W PSR1Q07800 427 aa3.68□□□□□ -1.82
MSH2YOL090W YDR056CQ12025 205 aa3.68□□□□□ -1.82
MSH2YOL090W RRP6Q12149 733 aaKnown RBP3.68□□□□□ -1.82
MSH2YOL090W NHA1Q99271 985 aa3.68□□□□□ -1.82
MSH2YOL090W CDC31P06704 161 aaKnown RBP3.67□□□□□ -1.82
MSH2YOL090W SBA1P28707 216 aaKnown RBP3.67□□□□□ -1.82
MSH2YOL090W RER2P35196 286 aa3.67□□□□□ -1.82
MSH2YOL090W MUM2P38236 366 aa3.67□□□□□ -1.82
MSH2YOL090W XDJ1P39102 459 aa3.67□□□□□ -1.82
MSH2YOL090W ESL1P40456 1118 aa3.67□□□□□ -1.82
MSH2YOL090W ALR2P43553 858 aa3.67□□□□□ -1.82
MSH2YOL090W MON1P53129 644 aa3.67□□□□□ -1.82
MSH2YOL090W RSC1P53236 928 aa3.67□□□□□ -1.82
MSH2YOL090W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
MSH2YOL090W SYH1Q02875 849 aaKnown RBP3.67□□□□□ -1.82
MSH2YOL090W HDA2Q06629 674 aa3.67□□□□□ -1.82
MSH2YOL090W TMA46Q12000 345 aaKnown RBP3.67□□□□□ -1.82
MSH2YOL090W CMR1Q12510 522 aaKnown RBP3.67□□□□□ -1.82
MSH2YOL090W PTP2P29461 750 aa3.67□□□□□ -1.82
MSH2YOL090W MCM10P32354 571 aa3.67□□□□□ -1.82
MSH2YOL090W UTR2P32623 467 aa3.67□□□□□ -1.82
MSH2YOL090W PBY1P38254 753 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms