RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W CCT3P39077 534 aaKnown RBP12.18□□□□□ -0.46
PRE6YOL038W MAK11P20484 414 aaKnown RBP12.17□□□□□ -0.46
PRE6YOL038W SPO22P40511 975 aa12.17□□□□□ -0.46
PRE6YOL038W SMD2Q06217 110 aaKnown RBP12.17□□□□□ -0.46
PRE6YOL038W CLB5P30283 435 aa12.16□□□□□ -0.46
PRE6YOL038W BRL1P38770 471 aa12.16□□□□□ -0.46
PRE6YOL038W CIT3P43635 486 aa12.16□□□□□ -0.46
PRE6YOL038W YGL138CP53122 345 aa12.16□□□□□ -0.46
PRE6YOL038W AIM33Q04516 312 aa12.16□□□□□ -0.46
PRE6YOL038W TSR3Q12094 313 aaKnown RBP12.16□□□□□ -0.46
PRE6YOL038W HCA4P20448 770 aaKnown RBP12.15□□□□□ -0.46
PRE6YOL038W VPS1P21576 704 aaKnown RBP12.15□□□□□ -0.46
PRE6YOL038W JHD1P40034 492 aa12.15□□□□□ -0.46
PRE6YOL038W GDE1Q02979 1223 aa12.15□□□□□ -0.46
PRE6YOL038W OYE2Q03558 400 aaKnown RBP12.15□□□□□ -0.46
PRE6YOL038W GPI13Q07830 1017 aa12.15□□□□□ -0.46
PRE6YOL038W TVP38P36164 337 aa12.14□□□□□ -0.47
PRE6YOL038W ISW1P38144 1129 aa12.14□□□□□ -0.47
PRE6YOL038W POA1P38218 177 aa12.14□□□□□ -0.47
PRE6YOL038W MATALPHA2P0CY08 210 aa12.13□□□□□ -0.47
PRE6YOL038W HMLALPHA2P0CY09 210 aa12.13□□□□□ -0.47
PRE6YOL038W BMH2P34730 273 aaKnown RBP12.13□□□□□ -0.47
PRE6YOL038W GPD2P41911 440 aaKnown RBP12.13□□□□□ -0.47
PRE6YOL038W KRI1P42846 591 aaKnown RBP12.13□□□□□ -0.47
PRE6YOL038W BRE2P43132 505 aa12.13□□□□□ -0.47
PRE6YOL038W RSC8P43609 557 aaKnown RBP12.13□□□□□ -0.47
PRE6YOL038W SES1P07284 462 aaKnown RBP12.12□□□□□ -0.47
PRE6YOL038W CDC6P09119 513 aa12.12□□□□□ -0.47
PRE6YOL038W IRE1P32361 1115 aa12.12□□□□□ -0.47
PRE6YOL038W RPN10P38886 268 aaKnown RBP12.12□□□□□ -0.47
PRE6YOL038W GAA1P39012 614 aa12.12□□□□□ -0.47
PRE6YOL038W CRD1Q07560 283 aa12.12□□□□□ -0.47
PRE6YOL038W NCR1Q12200 1170 aa12.12□□□□□ -0.47
PRE6YOL038W YLR422WQ06409 1932 aa12.11□□□□□ -0.47
PRE6YOL038W YHR131CP38835 850 aa12.11□□□□□ -0.47
PRE6YOL038W YEL025CP39991 1188 aa12.11□□□□□ -0.47
PRE6YOL038W HMF1P40037 129 aaKnown RBP12.11□□□□□ -0.47
PRE6YOL038W ALD5P40047 520 aaKnown RBP12.1□□□□□ -0.47
PRE6YOL038W PSP2P50109 593 aaKnown RBP12.1□□□□□ -0.47
PRE6YOL038W DIP5P53388 608 aa12.1□□□□□ -0.47
PRE6YOL038W YML020WQ03722 664 aa12.1□□□□□ -0.47
PRE6YOL038W YLR407WQ06070 228 aa12.1□□□□□ -0.47
PRE6YOL038W PGK1P00560 416 aaKnown RBP12.09□□□□□ -0.47
PRE6YOL038W ILV1P00927 576 aaKnown RBP12.09□□□□□ -0.47
PRE6YOL038W SMY2P32909 740 aaKnown RBP12.09□□□□□ -0.47
PRE6YOL038W ORC6P38826 435 aa12.09□□□□□ -0.47
PRE6YOL038W BNI5P53890 448 aaKnown RBP12.09□□□□□ -0.47
PRE6YOL038W ARP5P53946 755 aa12.09□□□□□ -0.47
PRE6YOL038W CUS1Q02554 436 aaPredicted RBP12.09□□□□□ -0.47
PRE6YOL038W AFT1P22149 690 aa12.08□□□□□ -0.48
PRE6YOL038W RME1P32338 300 aaKnown RBP12.08□□□□□ -0.48
PRE6YOL038W YKE2P52553 114 aa12.08□□□□□ -0.48
PRE6YOL038W YGR035CP53222 116 aa12.08□□□□□ -0.48
PRE6YOL038W DSE4P53753 1117 aa12.08□□□□□ -0.48
PRE6YOL038W EMI2Q04409 500 aaKnown RBP12.08□□□□□ -0.48
PRE6YOL038W PHM6Q05637 104 aa12.08□□□□□ -0.48
PRE6YOL038W SWI6P09959 803 aa12.07□□□□□ -0.48
PRE6YOL038W HUL5P53119 910 aa12.07□□□□□ -0.48
PRE6YOL038W RET3P53600 189 aa12.07□□□□□ -0.48
PRE6YOL038W DED1P06634 604 aaKnown RBP12.06□□□□□ -0.48
PRE6YOL038W SUP45P12385 437 aaKnown RBP12.06□□□□□ -0.48
PRE6YOL038W SRO9P25567 434 aaKnown RBP12.06□□□□□ -0.48
PRE6YOL038W MSS51P32335 436 aa12.06□□□□□ -0.48
PRE6YOL038W SUV3P32580 737 aa12.06□□□□□ -0.48
PRE6YOL038W UBC1P21734 215 aaKnown RBP12.05□□□□□ -0.48
PRE6YOL038W CDC48P25694 835 aaKnown RBP12.05□□□□□ -0.48
PRE6YOL038W SIS2P36024 562 aa12.05□□□□□ -0.48
PRE6YOL038W OPY1P38271 328 aa12.05□□□□□ -0.48
PRE6YOL038W GUA1P38625 525 aaKnown RBP12.05□□□□□ -0.48
PRE6YOL038W ATG32P40458 529 aa12.05□□□□□ -0.48
PRE6YOL038W ZPR1P53303 486 aaKnown RBP12.05□□□□□ -0.48
PRE6YOL038W UBP10P53874 792 aaPredicted RBP12.05□□□□□ -0.48
PRE6YOL038W SAS3P34218 831 aa12.04□□□□□ -0.48
PRE6YOL038W DRE2P36152 348 aa12.04□□□□□ -0.48
PRE6YOL038W ENT3P47160 408 aa12.04□□□□□ -0.48
PRE6YOL038W INP52P50942 1183 aa12.04□□□□□ -0.48
PRE6YOL038W MCM6P53091 1017 aaKnown RBP12.04□□□□□ -0.48
PRE6YOL038W MUK1Q02866 612 aa12.04□□□□□ -0.48
PRE6YOL038W SVF1Q05515 481 aa12.04□□□□□ -0.48
PRE6YOL038W FUB1P25659 250 aa12.03□□□□□ -0.48
PRE6YOL038W FMP10P40098 244 aa12.03□□□□□ -0.48
PRE6YOL038W FIS1P40515 155 aa12.03□□□□□ -0.48
PRE6YOL038W ULP2P40537 1034 aaPredicted RBP12.03□□□□□ -0.48
PRE6YOL038W SPO74P45819 413 aa12.03□□□□□ -0.48
PRE6YOL038W NAF1P53919 492 aaKnown RBP12.03□□□□□ -0.48
PRE6YOL038W MFM1Q02783 413 aa12.03□□□□□ -0.48
PRE6YOL038W TRS120Q04183 1289 aa12.03□□□□□ -0.48
PRE6YOL038W CLN3P13365 580 aa12.02□□□□□ -0.49
PRE6YOL038W CBP3P21560 335 aa12.02□□□□□ -0.49
PRE6YOL038W PRP22P24384 1145 aaKnown RBP12.02□□□□□ -0.49
PRE6YOL038W PGM1P33401 570 aaKnown RBP12.02□□□□□ -0.49
PRE6YOL038W STT3P39007 718 aaKnown RBP12.02□□□□□ -0.49
PRE6YOL038W OPT1P40897 799 aa12.02□□□□□ -0.49
PRE6YOL038W ACF4P47129 309 aa12.02□□□□□ -0.49
PRE6YOL038W CTF18P49956 741 aa12.02□□□□□ -0.49
PRE6YOL038W MDR1P53258 950 aa12.02□□□□□ -0.49
PRE6YOL038W CNM67P53865 581 aaKnown RBP12.02□□□□□ -0.49
PRE6YOL038W PNG1Q02890 363 aa12.02□□□□□ -0.49
PRE6YOL038W URK1P27515 501 aa12.01□□□□□ -0.49
PRE6YOL038W EFT1P32324 842 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms