RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C ECL1P48235 211 aa4.33□□□□□ -1.72
HRD1YOL013C RPN4Q03465 531 aa4.33□□□□□ -1.72
HRD1YOL013C SSB1P11484 613 aaKnown RBP4.32□□□□□ -1.72
HRD1YOL013C GRX4P32642 244 aa4.32□□□□□ -1.72
HRD1YOL013C HSP78P33416 811 aa4.32□□□□□ -1.72
HRD1YOL013C POL12P38121 705 aaPredicted RBP4.32□□□□□ -1.72
HRD1YOL013C YHL012WP38709 493 aa4.32□□□□□ -1.72
HRD1YOL013C NMD3P38861 518 aaKnown RBP4.32□□□□□ -1.72
HRD1YOL013C SSB2P40150 613 aaKnown RBP4.32□□□□□ -1.72
HRD1YOL013C YOL057WQ08225 711 aa4.32□□□□□ -1.72
HRD1YOL013C DFG16Q99234 619 aa4.32□□□□□ -1.72
HRD1YOL013C MDL2P33311 773 aa4.32□□□□□ -1.72
HRD1YOL013C PTC7P38797 343 aa4.32□□□□□ -1.72
HRD1YOL013C ENT3P47160 408 aa4.32□□□□□ -1.72
HRD1YOL013C ORC3P54790 616 aa4.32□□□□□ -1.72
HRD1YOL013C CDC53Q12018 815 aaKnown RBP4.32□□□□□ -1.72
HRD1YOL013C DED1P06634 604 aaKnown RBP4.31□□□□□ -1.72
HRD1YOL013C GTS1P40956 396 aa4.31□□□□□ -1.72
HRD1YOL013C YJR142WP47173 342 aa4.31□□□□□ -1.72
HRD1YOL013C ESF1Q06344 628 aaKnown RBP4.31□□□□□ -1.72
HRD1YOL013C HDA2Q06629 674 aa4.31□□□□□ -1.72
HRD1YOL013C PTC5Q12511 572 aa4.31□□□□□ -1.72
HRD1YOL013C SAM35P14693 329 aa4.3□□□□□ -1.72
HRD1YOL013C ELM1P32801 640 aa4.3□□□□□ -1.72
HRD1YOL013C LRG1P35688 1017 aa4.3□□□□□ -1.72
HRD1YOL013C YJL045WP47052 634 aa4.3□□□□□ -1.72
HRD1YOL013C SIW14P53965 281 aa4.3□□□□□ -1.72
HRD1YOL013C RMD1Q03441 430 aa4.3□□□□□ -1.72
HRD1YOL013C POB3Q04636 552 aaKnown RBP4.3□□□□□ -1.72
HRD1YOL013C AOS1Q06624 347 aa4.3□□□□□ -1.72
HRD1YOL013C BDF2Q07442 638 aa4.3□□□□□ -1.72
HRD1YOL013C WRS1Q12109 432 aaKnown RBP4.3□□□□□ -1.72
HRD1YOL013C SRO9P25567 434 aaKnown RBP4.29□□□□□ -1.72
HRD1YOL013C PEP7P32609 515 aa4.29□□□□□ -1.72
HRD1YOL013C YSC84P32793 468 aa4.29□□□□□ -1.72
HRD1YOL013C AFG2P32794 780 aa4.29□□□□□ -1.72
HRD1YOL013C SEG2P34250 1132 aa4.29□□□□□ -1.72
HRD1YOL013C MNN1P39106 762 aa4.29□□□□□ -1.72
HRD1YOL013C MRL1Q06815 381 aa4.29□□□□□ -1.72
HRD1YOL013C STI1P15705 589 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
HRD1YOL013C KIP1P28742 1111 aa4.29□□□□□ -1.72
HRD1YOL013C ALG3P38179 458 aa4.29□□□□□ -1.72
HRD1YOL013C TAT2P38967 592 aa4.29□□□□□ -1.72
HRD1YOL013C TPM2P40414 161 aa4.29□□□□□ -1.72
HRD1YOL013C FOL2P51601 243 aaKnown RBP4.29□□□□□ -1.72
HRD1YOL013C ROD1Q02805 837 aa4.29□□□□□ -1.72
HRD1YOL013C GIN4Q12263 1142 aa4.29□□□□□ -1.72
HRD1YOL013C LPX1Q12405 387 aaKnown RBP4.29□□□□□ -1.72
HRD1YOL013C NIT1P40447 199 aa4.28□□□□□ -1.72
HRD1YOL013C NBA1Q08229 501 aaKnown RBP4.28□□□□□ -1.72
HRD1YOL013C YPL260WQ08977 551 aa4.28□□□□□ -1.72
HRD1YOL013C COQ4O13525 335 aa4.27□□□□□ -1.73
HRD1YOL013C GCR1P07261 785 aa4.27□□□□□ -1.73
HRD1YOL013C RAD27P26793 382 aa4.27□□□□□ -1.73
HRD1YOL013C MKK2P32491 506 aa4.27□□□□□ -1.73
HRD1YOL013C ZDS1P50111 915 aaKnown RBP4.27□□□□□ -1.73
HRD1YOL013C HUL5P53119 910 aa4.27□□□□□ -1.73
HRD1YOL013C PRP43P53131 767 aaKnown RBP4.27□□□□□ -1.73
HRD1YOL013C AIM26P32858 118 aa4.26□□□□□ -1.73
HRD1YOL013C CCZ1P38273 704 aa4.26□□□□□ -1.73
HRD1YOL013C HXT13P39924 564 aa4.26□□□□□ -1.73
HRD1YOL013C YJL049WP47048 450 aa4.26□□□□□ -1.73
HRD1YOL013C GNP1P48813 663 aa4.26□□□□□ -1.73
HRD1YOL013C TNA1P53322 534 aa4.26□□□□□ -1.73
HRD1YOL013C HXT17P53631 564 aa4.26□□□□□ -1.73
HRD1YOL013C MDG1P53885 366 aa4.26□□□□□ -1.73
HRD1YOL013C HXT15P54854 567 aa4.26□□□□□ -1.73
HRD1YOL013C RAT1Q02792 1006 aaKnown RBP4.26□□□□□ -1.73
HRD1YOL013C HOS3Q02959 697 aaKnown RBP4.26□□□□□ -1.73
HRD1YOL013C PPM2Q08282 695 aa4.26□□□□□ -1.73
HRD1YOL013C RTT10Q08924 1013 aa4.26□□□□□ -1.73
HRD1YOL013C YGR161W-CQ3E744 92 aa4.26□□□□□ -1.73
HRD1YOL013C MET6P05694 767 aaKnown RBP4.26□□□□□ -1.73
HRD1YOL013C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
HRD1YOL013C GRX1P25373 110 aaKnown RBP4.26□□□□□ -1.73
HRD1YOL013C SYP1P25623 870 aaKnown RBP4.26□□□□□ -1.73
HRD1YOL013C TIM23P32897 222 aa4.26□□□□□ -1.73
HRD1YOL013C UBP12P39538 1254 aa4.26□□□□□ -1.73
HRD1YOL013C GPB2P39717 880 aa4.26□□□□□ -1.73
HRD1YOL013C RPN3P40016 523 aaKnown RBP4.26□□□□□ -1.73
HRD1YOL013C YEN1P40028 759 aa4.26□□□□□ -1.73
HRD1YOL013C NUP82P40368 713 aa4.26□□□□□ -1.73
HRD1YOL013C RSC58Q07979 502 aa4.26□□□□□ -1.73
HRD1YOL013C SPO21Q12411 609 aa4.26□□□□□ -1.73
HRD1YOL013C YOR131CQ12486 218 aa4.26□□□□□ -1.73
HRD1YOL013C CLN2P20438 545 aa4.25□□□□□ -1.73
HRD1YOL013C GAS1P22146 559 aaKnown RBP4.25□□□□□ -1.73
HRD1YOL013C PUF4P25339 888 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
HRD1YOL013C RNQ1P25367 405 aa4.25□□□□□ -1.73
HRD1YOL013C BAP2P38084 609 aa4.25□□□□□ -1.73
HRD1YOL013C RGD1P38339 666 aa4.25□□□□□ -1.73
HRD1YOL013C UBP5P39944 805 aa4.25□□□□□ -1.73
HRD1YOL013C CWC24P53769 259 aa4.25□□□□□ -1.73
HRD1YOL013C TMA46Q12000 345 aaKnown RBP4.25□□□□□ -1.73
HRD1YOL013C CNN1P43618 361 aa4.24□□□□□ -1.73
HRD1YOL013C ENV11P53246 860 aa4.24□□□□□ -1.73
HRD1YOL013C RSB1Q08417 382 aa4.24□□□□□ -1.73
HRD1YOL013C SPS1P08458 490 aa4.23□□□□□ -1.73
HRD1YOL013C PRI2P20457 528 aa4.23□□□□□ -1.73
HRD1YOL013C PET112P33893 541 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms