RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W STE6P12866 1290 aa8.36□□□□□ -1.07
HDA1YNL021W MNN4P36044 1178 aa8.36□□□□□ -1.07
HDA1YNL021W HUL4P40985 892 aa8.36□□□□□ -1.07
HDA1YNL021W UBX4P54730 416 aa8.36□□□□□ -1.07
HDA1YNL021W MSH6Q03834 1242 aa8.36□□□□□ -1.07
HDA1YNL021W UTP4Q06679 776 aaKnown RBP8.36□□□□□ -1.07
HDA1YNL021W NUP145P49687 1317 aa8.35□□□□□ -1.07
HDA1YNL021W NUP188P52593 1655 aaKnown RBP8.35□□□□□ -1.07
HDA1YNL021W Q0182Q9ZZW1 134 aa8.35□□□□□ -1.07
HDA1YNL021W UTP7P40055 554 aaKnown RBP8.35□□□□□ -1.07
HDA1YNL021W YEF3P16521 1044 aaKnown RBP8.34□□□□□ -1.07
HDA1YNL021W PBY1P38254 753 aa8.34□□□□□ -1.07
HDA1YNL021W DYS1P38791 387 aa8.34□□□□□ -1.07
HDA1YNL021W PEX14P53112 341 aa8.34□□□□□ -1.07
HDA1YNL021W ERP4Q12450 207 aa8.34□□□□□ -1.07
HDA1YNL021W MDM12Q92328 271 aa8.34□□□□□ -1.07
HDA1YNL021W BSD2P38356 321 aa8.33□□□□□ -1.08
HDA1YNL021W APM2P38700 605 aa8.33□□□□□ -1.08
HDA1YNL021W SUM1P46676 1062 aa8.33□□□□□ -1.08
HDA1YNL021W SPC105P53148 917 aa8.33□□□□□ -1.08
HDA1YNL021W YNL035CP53962 389 aaKnown RBP8.33□□□□□ -1.08
HDA1YNL021W TBS1P38114 1094 aa8.33□□□□□ -1.08
HDA1YNL021W SAP155P43612 1002 aa8.33□□□□□ -1.08
HDA1YNL021W PIP2P52960 996 aa8.33□□□□□ -1.08
HDA1YNL021W SEC23P15303 768 aaKnown RBP8.32□□□□□ -1.08
HDA1YNL021W MLF3P32047 452 aa8.32□□□□□ -1.08
HDA1YNL021W ALR2P43553 858 aa8.32□□□□□ -1.08
HDA1YNL021W YGL140CP53120 1219 aa8.32□□□□□ -1.08
HDA1YNL021W RRI2Q12348 645 aa8.32□□□□□ -1.08
HDA1YNL021W VMR1P38735 1592 aa8.32□□□□□ -1.08
HDA1YNL021W DNF2Q12675 1612 aa8.32□□□□□ -1.08
HDA1YNL021W RAV1P47104 1357 aa8.32□□□□□ -1.08
HDA1YNL021W TOP3P13099 656 aa8.32□□□□□ -1.08
HDA1YNL021W EXO84P38261 753 aa8.32□□□□□ -1.08
HDA1YNL021W ULI1P43604 169 aa8.32□□□□□ -1.08
HDA1YNL021W NPL3Q01560 414 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
HDA1YNL021W EMG1Q06287 252 aaKnown RBP8.32□□□□□ -1.08
HDA1YNL021W FAP7Q12055 197 aaPredicted RBP8.32□□□□□ -1.08
HDA1YNL021W GAL1P04385 528 aa8.31□□□□□ -1.08
HDA1YNL021W LYP1P32487 611 aa8.31□□□□□ -1.08
HDA1YNL021W FIR1P40020 876 aa8.31□□□□□ -1.08
HDA1YNL021W MGS1P40151 587 aa8.31□□□□□ -1.08
HDA1YNL021W MET14Q02196 202 aa8.31□□□□□ -1.08
HDA1YNL021W HBS1P32769 611 aaKnown RBP8.3□□□□□ -1.08
HDA1YNL021W RRP8P38961 392 aaKnown RBP8.3□□□□□ -1.08
HDA1YNL021W GIC2Q06648 383 aa8.3□□□□□ -1.08
HDA1YNL021W YPL066WQ12194 479 aa8.3□□□□□ -1.08
HDA1YNL021W IML1P47170 1584 aa8.3□□□□□ -1.08
HDA1YNL021W PDR11P40550 1411 aa8.3□□□□□ -1.08
HDA1YNL021W TFC4P33339 1025 aa8.3□□□□□ -1.08
HDA1YNL021W RVS167P39743 482 aaKnown RBP8.3□□□□□ -1.08
HDA1YNL021W HBN1Q96VH4 193 aa8.3□□□□□ -1.08
HDA1YNL021W RTC1Q08281 1341 aa8.3□□□□□ -1.08
HDA1YNL021W APA1P16550 321 aaKnown RBP8.29□□□□□ -1.08
HDA1YNL021W RPC31P17890 251 aa8.29□□□□□ -1.08
HDA1YNL021W MKS1P34072 584 aa8.29□□□□□ -1.08
HDA1YNL021W MOT2P34909 587 aaKnown RBP8.29□□□□□ -1.08
HDA1YNL021W BAP2P38084 609 aa8.29□□□□□ -1.08
HDA1YNL021W PEX28P38848 579 aa8.29□□□□□ -1.08
HDA1YNL021W ARH1P48360 493 aa8.29□□□□□ -1.08
HDA1YNL021W RPS31P05759 152 aaKnown RBP8.28□□□□□ -1.08
HDA1YNL021W TYS1P36421 394 aaKnown RBP8.28□□□□□ -1.08
HDA1YNL021W CCC2P38995 1004 aa8.28□□□□□ -1.08
HDA1YNL021W MTR4P47047 1073 aaKnown RBP8.28□□□□□ -1.08
HDA1YNL021W SDA1P53313 767 aaKnown RBP8.28□□□□□ -1.08
HDA1YNL021W SIW14P53965 281 aa8.28□□□□□ -1.08
HDA1YNL021W SNU66Q12420 587 aaPredicted RBP8.28□□□□□ -1.08
HDA1YNL021W CMR1Q12510 522 aaKnown RBP8.28□□□□□ -1.08
HDA1YNL021W PAT1P25644 796 aaKnown RBP8.27□□□□□ -1.08
HDA1YNL021W PYC2P32327 1180 aaKnown RBP8.27□□□□□ -1.08
HDA1YNL021W HSP78P33416 811 aa8.27□□□□□ -1.08
HDA1YNL021W RDH54P38086 958 aa8.27□□□□□ -1.08
HDA1YNL021W IES1P43579 692 aa8.27□□□□□ -1.08
HDA1YNL021W MDM1Q01846 1127 aa8.27□□□□□ -1.08
HDA1YNL021W XDJ1P39102 459 aa8.27□□□□□ -1.09
HDA1YNL021W MBP1P39678 833 aa8.27□□□□□ -1.09
HDA1YNL021W BNI4P53858 892 aa8.27□□□□□ -1.09
HDA1YNL021W NOG1Q02892 647 aaKnown RBP8.27□□□□□ -1.09
HDA1YNL021W MTQ2Q03920 221 aaPredicted RBP8.27□□□□□ -1.09
HDA1YNL021W TRZ1P36159 838 aaPredicted RBP8.26□□□□□ -1.09
HDA1YNL021W GEM1P39722 662 aa8.26□□□□□ -1.09
HDA1YNL021W VNX1P42839 908 aa8.26□□□□□ -1.09
HDA1YNL021W YDL124WQ07551 312 aaKnown RBP8.26□□□□□ -1.09
HDA1YNL021W GIP1P38229 639 aa8.26□□□□□ -1.09
HDA1YNL021W YAP3P38749 330 aa8.26□□□□□ -1.09
HDA1YNL021W FRK1Q03002 865 aaPredicted RBP8.26□□□□□ -1.09
HDA1YNL021W DFG5Q05031 458 aa8.25□□□□□ -1.09
HDA1YNL021W VBA3P25594 458 aa8.24□□□□□ -1.09
HDA1YNL021W MAL31P38156 614 aa8.24□□□□□ -1.09
HDA1YNL021W YBL086CP38177 466 aa8.24□□□□□ -1.09
HDA1YNL021W RIM11P38615 370 aa8.24□□□□□ -1.09
HDA1YNL021W TIF11P38912 153 aaKnown RBP8.24□□□□□ -1.09
HDA1YNL021W RSM26P47141 266 aa8.24□□□□□ -1.09
HDA1YNL021W PUS5Q06244 254 aa8.24□□□□□ -1.09
HDA1YNL021W YOR296WQ08748 1289 aa8.24□□□□□ -1.09
HDA1YNL021W HIF1Q12373 385 aa8.24□□□□□ -1.09
HDA1YNL021W YBL029C-AQ3E756 94 aa8.24□□□□□ -1.09
HDA1YNL021W SPT16P32558 1035 aaKnown RBP8.24□□□□□ -1.09
HDA1YNL021W ROD1Q02805 837 aa8.24□□□□□ -1.09
HDA1YNL021W TIF35Q04067 274 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 135.8 ms