RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W SUV3P32580 737 aa8.69□□□□□ -1.02
PRE5YMR314W APN2P38207 520 aa8.69□□□□□ -1.02
PRE5YMR314W SLX1P38324 304 aa8.69□□□□□ -1.02
PRE5YMR314W HMF1P40037 129 aaKnown RBP8.69□□□□□ -1.02
PRE5YMR314W MYO5Q04439 1219 aaKnown RBP8.69□□□□□ -1.02
PRE5YMR314W PRC1P00729 532 aa8.68□□□□□ -1.02
PRE5YMR314W TFA1P36100 482 aa8.68□□□□□ -1.02
PRE5YMR314W FAF1P40546 346 aaPredicted RBP8.68□□□□□ -1.02
PRE5YMR314W PUF6Q04373 656 aaKnown RBP8.68□□□□□ -1.02
PRE5YMR314W SSF2Q12153 453 aaPredicted RBP8.68□□□□□ -1.02
PRE5YMR314W KEX2P13134 814 aa8.67□□□□□ -1.02
PRE5YMR314W TVP38P36164 337 aa8.67□□□□□ -1.02
PRE5YMR314W BUD16P39988 312 aa8.67□□□□□ -1.02
PRE5YMR314W YLR455WQ06188 304 aa8.67□□□□□ -1.02
PRE5YMR314W PIG1Q06216 648 aa8.67□□□□□ -1.02
PRE5YMR314W IRC10Q08118 586 aa8.67□□□□□ -1.02
PRE5YMR314W TIF1P10081 395 aaKnown RBP8.66□□□□□ -1.02
PRE5YMR314W RPL8AP17076 256 aaKnown RBP8.66□□□□□ -1.02
PRE5YMR314W MAK31P23059 88 aa8.66□□□□□ -1.02
PRE5YMR314W TPM2P40414 161 aa8.66□□□□□ -1.02
PRE5YMR314W YJL045WP47052 634 aa8.66□□□□□ -1.02
PRE5YMR314W PSP2P50109 593 aaKnown RBP8.66□□□□□ -1.02
PRE5YMR314W HUL5P53119 910 aa8.66□□□□□ -1.02
PRE5YMR314W MDR1P53258 950 aa8.66□□□□□ -1.02
PRE5YMR314W MDM1Q01846 1127 aa8.66□□□□□ -1.02
PRE5YMR314W VIP1Q06685 1146 aaKnown RBP8.66□□□□□ -1.02
PRE5YMR314W PWP2P25635 923 aaKnown RBP8.65□□□□□ -1.02
PRE5YMR314W IMG2P25642 146 aaPredicted RBP8.65□□□□□ -1.02
PRE5YMR314W COQ8P27697 501 aa8.65□□□□□ -1.02
PRE5YMR314W SKI2P35207 1287 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
PRE5YMR314W DRE2P36152 348 aa8.65□□□□□ -1.02
PRE5YMR314W HDA1P53973 706 aa8.65□□□□□ -1.02
PRE5YMR314W CLB5P30283 435 aa8.64□□□□□ -1.03
PRE5YMR314W BUD2P33314 1104 aa8.64□□□□□ -1.03
PRE5YMR314W HXT5P38695 592 aa8.64□□□□□ -1.03
PRE5YMR314W GPI13Q07830 1017 aa8.64□□□□□ -1.03
PRE5YMR314W CAN1P04817 590 aa8.63□□□□□ -1.03
PRE5YMR314W SES1P07284 462 aaKnown RBP8.63□□□□□ -1.03
PRE5YMR314W UBC1P21734 215 aaKnown RBP8.63□□□□□ -1.03
PRE5YMR314W PAN5P38787 379 aa8.63□□□□□ -1.03
PRE5YMR314W CRG1P38892 291 aaRIP-Chip data8.63□□□□□ -1.03not detected
PRE5YMR314W YEL025CP39991 1188 aa8.63□□□□□ -1.03
PRE5YMR314W MMF1P40185 145 aaKnown RBP8.63□□□□□ -1.03
PRE5YMR314W MUK1Q02866 612 aa8.63□□□□□ -1.03
PRE5YMR314W SPN1Q06505 410 aaPredicted RBP8.63□□□□□ -1.03
PRE5YMR314W DSE3Q08729 430 aa8.63□□□□□ -1.03
PRE5YMR314W CDC16P09798 840 aa8.62□□□□□ -1.03
PRE5YMR314W CUP1-1P0CX80 61 aa8.62□□□□□ -1.03
PRE5YMR314W CUP1-2P0CX81 61 aa8.62□□□□□ -1.03
PRE5YMR314W YTA12P40341 825 aa8.62□□□□□ -1.03
PRE5YMR314W CSM2P40465 213 aa8.62□□□□□ -1.03
PRE5YMR314W YFL052WP43551 465 aa8.62□□□□□ -1.03
PRE5YMR314W ALG2P43636 503 aa8.62□□□□□ -1.03
PRE5YMR314W GCV2P49095 1034 aa8.62□□□□□ -1.03
PRE5YMR314W HCR1Q05775 265 aaKnown RBP8.62□□□□□ -1.03
PRE5YMR314W SGO1Q08490 590 aa8.62□□□□□ -1.03
PRE5YMR314W BET2P20133 325 aa8.61□□□□□ -1.03
PRE5YMR314W RER2P35196 286 aa8.61□□□□□ -1.03
PRE5YMR314W MRPL7P36519 292 aa8.61□□□□□ -1.03
PRE5YMR314W APM2P38700 605 aa8.61□□□□□ -1.03
PRE5YMR314W BIO5P53744 561 aaKnown RBP8.61□□□□□ -1.03
PRE5YMR314W RFS1P38234 210 aaKnown RBP8.6□□□□□ -1.03
PRE5YMR314W SAD1P43589 448 aa8.6□□□□□ -1.03
PRE5YMR314W WHI4Q07655 649 aaKnown RBP8.6□□□□□ -1.03
PRE5YMR314W ARP6Q12509 438 aa8.6□□□□□ -1.03
PRE5YMR314W SIS1P25294 352 aaKnown RBP8.59□□□□□ -1.03
PRE5YMR314W ADK2P26364 225 aa8.59□□□□□ -1.03
PRE5YMR314W DID4P36108 232 aa8.59□□□□□ -1.03
PRE5YMR314W SAF1P38352 637 aa8.59□□□□□ -1.03
PRE5YMR314W LEO1P38439 464 aa8.59□□□□□ -1.03
PRE5YMR314W CCC2P38995 1004 aa8.59□□□□□ -1.03
PRE5YMR314W MOB1P40484 314 aa8.59□□□□□ -1.03
PRE5YMR314W TFC6Q06339 672 aa8.59□□□□□ -1.03
PRE5YMR314W SUL1P38359 859 aa8.58□□□□□ -1.04
PRE5YMR314W ARP1P38696 384 aa8.58□□□□□ -1.04
PRE5YMR314W ESL1P40456 1118 aa8.58□□□□□ -1.04
PRE5YMR314W SNF1P06782 633 aaKnown RBP8.57□□□□□ -1.04
PRE5YMR314W RPL40AP0CH08 128 aaKnown RBP8.57□□□□□ -1.04
PRE5YMR314W RPL40BP0CH09 128 aaKnown RBP8.57□□□□□ -1.04
PRE5YMR314W MAP2P38174 421 aaKnown RBP8.57□□□□□ -1.04
PRE5YMR314W GDE1Q02979 1223 aa8.57□□□□□ -1.04
PRE5YMR314W SVF1Q05515 481 aa8.57□□□□□ -1.04
PRE5YMR314W PUP3P25451 205 aaKnown RBP8.56□□□□□ -1.04
PRE5YMR314W ISW1P38144 1129 aa8.56□□□□□ -1.04
PRE5YMR314W RFC1P38630 861 aaKnown RBP8.56□□□□□ -1.04
PRE5YMR314W YHL026CP38740 315 aa8.56□□□□□ -1.04
PRE5YMR314W CIT3P43635 486 aa8.56□□□□□ -1.04
PRE5YMR314W ASE1P50275 885 aa8.56□□□□□ -1.04
PRE5YMR314W ZPR1P53303 486 aaKnown RBP8.56□□□□□ -1.04
PRE5YMR314W YNL134CP53912 376 aaKnown RBP8.56□□□□□ -1.04
PRE5YMR314W YDR344CQ05510 147 aa8.56□□□□□ -1.04
PRE5YMR314W PHM6Q05637 104 aa8.56□□□□□ -1.04
PRE5YMR314W OXR1Q08952 273 aa8.56□□□□□ -1.04
PRE5YMR314W APE1P14904 514 aa8.55□□□□□ -1.04
PRE5YMR314W SEC21P32074 935 aaKnown RBP8.55□□□□□ -1.04
PRE5YMR314W UBP11P36026 717 aa8.55□□□□□ -1.04
PRE5YMR314W YAP1801P38856 637 aa8.55□□□□□ -1.04
PRE5YMR314W ALT2P52892 507 aa8.55□□□□□ -1.04
PRE5YMR314W OYE2Q03558 400 aaKnown RBP8.55□□□□□ -1.04
PRE5YMR314W CRD1Q07560 283 aa8.55□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms