RNA–Protein interactions for RNA: YML013W

UBX2, Transcript of Bridging factor involved in ER-associated protein degradation (ERAD), yeastyeast

Gene UBX2, Length 1,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX2YML013W PDR12Q02785 1511 aa6.16□□□□□ -1.42
UBX2YML013W ROM2P51862 1356 aaKnown RBP6.15□□□□□ -1.42
UBX2YML013W PLC1P32383 869 aa6.15□□□□□ -1.43
UBX2YML013W CEP3P40969 608 aa6.15□□□□□ -1.43
UBX2YML013W SPC19Q03954 165 aa6.15□□□□□ -1.43
UBX2YML013W ISR1Q06098 443 aaKnown RBP6.15□□□□□ -1.43
UBX2YML013W RTT10Q08924 1013 aa6.15□□□□□ -1.43
UBX2YML013W PTP2P29461 750 aa6.14□□□□□ -1.43
UBX2YML013W TFC4P33339 1025 aa6.14□□□□□ -1.43
UBX2YML013W RRN3P36070 627 aa6.14□□□□□ -1.43
UBX2YML013W GDT1P38301 280 aaPredicted RBP6.14□□□□□ -1.43
UBX2YML013W ALA1P40825 983 aaKnown RBP6.14□□□□□ -1.43
UBX2YML013W DAN4P47179 1161 aa6.14□□□□□ -1.43
UBX2YML013W RPA14P50106 137 aa6.14□□□□□ -1.43
UBX2YML013W YML131WQ03102 365 aa6.14□□□□□ -1.43
UBX2YML013W TAF8Q03750 510 aa6.14□□□□□ -1.43
UBX2YML013W SML1Q04964 104 aa6.14□□□□□ -1.43
UBX2YML013W IMH1Q06704 911 aaKnown RBP6.14□□□□□ -1.43
UBX2YML013W ALR1Q08269 859 aa6.14□□□□□ -1.43
UBX2YML013W RPS6AP0CX37 236 aaKnown RBP6.13□□□□□ -1.43
UBX2YML013W RPS6BP0CX38 236 aaPredicted RBP6.13□□□□□ -1.43
UBX2YML013W HOM3P10869 527 aa6.13□□□□□ -1.43
UBX2YML013W IXR1P33417 597 aa6.13□□□□□ -1.43
UBX2YML013W PBY1P38254 753 aa6.13□□□□□ -1.43
UBX2YML013W DOT6P40059 670 aaKnown RBP6.13□□□□□ -1.43
UBX2YML013W MNT3P40549 630 aa6.13□□□□□ -1.43
UBX2YML013W VPS30Q02948 557 aa6.13□□□□□ -1.43
UBX2YML013W TLG1Q03322 224 aa6.13□□□□□ -1.43
UBX2YML013W INP54Q08227 384 aaKnown RBP6.13□□□□□ -1.43
UBX2YML013W RRP6Q12149 733 aaKnown RBP6.13□□□□□ -1.43
UBX2YML013W SNF2P22082 1703 aa6.13□□□□□ -1.43
UBX2YML013W CYB2P00175 591 aa6.13□□□□□ -1.43
UBX2YML013W GCR1P07261 785 aa6.13□□□□□ -1.43
UBX2YML013W PRP40P33203 583 aaKnown RBP6.13□□□□□ -1.43
UBX2YML013W RIM4P38741 713 aa6.13□□□□□ -1.43
UBX2YML013W VPS41P38959 992 aa6.13□□□□□ -1.43
UBX2YML013W RVS167P39743 482 aaKnown RBP6.13□□□□□ -1.43
UBX2YML013W IRR1P40541 1150 aa6.13□□□□□ -1.43
UBX2YML013W SDA1P53313 767 aaKnown RBP6.13□□□□□ -1.43
UBX2YML013W EEB1Q02891 456 aa6.13□□□□□ -1.43
UBX2YML013W BUL2Q03758 920 aaKnown RBP6.13□□□□□ -1.43
UBX2YML013W YLR352WQ06479 807 aa6.13□□□□□ -1.43
UBX2YML013W REH1Q06709 432 aa6.13□□□□□ -1.43
UBX2YML013W SBP1P10080 294 aaKnown RBP6.12□□□□□ -1.43
UBX2YML013W SMC1P32908 1225 aa6.12□□□□□ -1.43
UBX2YML013W MRP8P35719 219 aa6.12□□□□□ -1.43
UBX2YML013W PES4P39684 611 aa6.12□□□□□ -1.43
UBX2YML013W PFD1P46988 109 aa6.12□□□□□ -1.43
UBX2YML013W YCS4Q06156 1176 aa6.12□□□□□ -1.43
UBX2YML013W SEC39Q12745 709 aa6.12□□□□□ -1.43
UBX2YML013W HAP1P0CE41 1502 aa6.12□□□□□ -1.43
UBX2YML013W HTA1P04911 132 aaKnown RBP6.11□□□□□ -1.43
UBX2YML013W HTA2P04912 132 aa6.11□□□□□ -1.43
UBX2YML013W ZUO1P32527 433 aaKnown RBP6.11□□□□□ -1.43
UBX2YML013W HSP78P33416 811 aa6.11□□□□□ -1.43
UBX2YML013W BET3P36149 193 aa6.11□□□□□ -1.43
UBX2YML013W APE4P38821 490 aa6.11□□□□□ -1.43
UBX2YML013W BUD27P43573 796 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
UBX2YML013W VTC2P43585 828 aa6.11□□□□□ -1.43
UBX2YML013W HOS2P53096 452 aaPredicted RBP6.11□□□□□ -1.43
UBX2YML013W YPL109CQ02981 657 aa6.11□□□□□ -1.43
UBX2YML013W IRC3Q06683 689 aa6.11□□□□□ -1.43
UBX2YML013W YPR097WQ06839 1073 aa6.11□□□□□ -1.43
UBX2YML013W TMA46Q12000 345 aaKnown RBP6.11□□□□□ -1.43
UBX2YML013W TY1B-AO13527 1196 aaKnown RBP6.11□□□□□ -1.43
UBX2YML013W RAD3P06839 778 aa6.11□□□□□ -1.43
UBX2YML013W AGP1P25376 633 aa6.11□□□□□ -1.43
UBX2YML013W NIC96P34077 839 aa6.11□□□□□ -1.43
UBX2YML013W EAP1P36041 632 aaKnown RBP6.11□□□□□ -1.43
UBX2YML013W TYS1P36421 394 aaKnown RBP6.11□□□□□ -1.43
UBX2YML013W BAP2P38084 609 aa6.11□□□□□ -1.43
UBX2YML013W ESL1P40456 1118 aa6.11□□□□□ -1.43
UBX2YML013W CIR1P42940 261 aa6.11□□□□□ -1.43
UBX2YML013W MAL11P53048 616 aa6.11□□□□□ -1.43
UBX2YML013W ARP5P53946 755 aa6.11□□□□□ -1.43
UBX2YML013W SHE9Q04172 456 aa6.11□□□□□ -1.43
UBX2YML013W HFD1Q04458 532 aa6.11□□□□□ -1.43
UBX2YML013W ERV41Q04651 352 aa6.11□□□□□ -1.43
UBX2YML013W PHM6Q05637 104 aa6.11□□□□□ -1.43
UBX2YML013W IQG1Q12280 1495 aa6.1□□□□□ -1.43
UBX2YML013W CAT8P39113 1433 aa6.1□□□□□ -1.43
UBX2YML013W KAR2P16474 682 aaKnown RBP6.1□□□□□ -1.43
UBX2YML013W APA1P16550 321 aaKnown RBP6.1□□□□□ -1.43
UBX2YML013W MSM1P22438 575 aa6.1□□□□□ -1.43
UBX2YML013W URA1P28272 314 aaPredicted RBP6.1□□□□□ -1.43
UBX2YML013W BRF1P29056 596 aa6.1□□□□□ -1.43
UBX2YML013W CHS3P29465 1165 aa6.1□□□□□ -1.43
UBX2YML013W MCM5P29496 775 aaKnown RBP6.1□□□□□ -1.43
UBX2YML013W PPH3P32345 308 aa6.1□□□□□ -1.43
UBX2YML013W MCM10P32354 571 aa6.1□□□□□ -1.43
UBX2YML013W PUP2P32379 260 aa6.1□□□□□ -1.43
UBX2YML013W ABZ1P37254 787 aaPredicted RBP6.1□□□□□ -1.43
UBX2YML013W GDH3P39708 457 aa6.1□□□□□ -1.43
UBX2YML013W EMW1P42842 904 aaKnown RBP6.1□□□□□ -1.43
UBX2YML013W GPI8P49018 411 aa6.1□□□□□ -1.43
UBX2YML013W YNL050CP53952 270 aa6.1□□□□□ -1.43
UBX2YML013W CTF4Q01454 927 aa6.1□□□□□ -1.43
UBX2YML013W SRP1Q02821 542 aaKnown RBP6.1□□□□□ -1.43
UBX2YML013W GIC2Q06648 383 aa6.1□□□□□ -1.43
UBX2YML013W YDL124WQ07551 312 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms