RNA–Protein interactions for RNA: YML013W

UBX2, Transcript of Bridging factor involved in ER-associated protein degradation (ERAD), yeastyeast

Gene UBX2, Length 1,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX2YML013W DRS1P32892 752 aaKnown RBP11.13□□□□□ -0.63
UBX2YML013W TFA1P36100 482 aa10.38□□□□□ -0.75
UBX2YML013W BFR2Q06631 534 aaKnown RBP10.16□□□□□ -0.78
UBX2YML013W RQC2Q12532 1038 aaKnown RBP10.09□□□□□ -0.79
UBX2YML013W MTC1P47018 478 aaKnown RBP9.82□□□□□ -0.84
UBX2YML013W TAF7Q05021 590 aa9.72□□□□□ -0.85
UBX2YML013W AVT3P36062 692 aa9.24□□□□□ -0.93
UBX2YML013W DMA1P38823 416 aa9.06□□□□□ -0.96
UBX2YML013W DIP2Q12220 943 aaPredicted RBP9.04□□□□□ -0.96
UBX2YML013W LEO1P38439 464 aa8.9□□□□□ -0.98
UBX2YML013W LEU3P08638 886 aa8.33□□□□□ -1.08
UBX2YML013W PTP3P40048 928 aa8.32□□□□□ -1.08
UBX2YML013W DMA2P53924 522 aa8.2□□□□□ -1.1
UBX2YML013W RSE1Q04693 1361 aaKnown RBP8.19□□□□□ -1.1
UBX2YML013W SAS10Q12136 610 aaPredicted RBP8.13□□□□□ -1.11
UBX2YML013W AIM44Q99299 758 aa8.06□□□□□ -1.12
UBX2YML013W RLF2Q12495 606 aa8.04□□□□□ -1.12
UBX2YML013W ABP1P15891 592 aaKnown RBP8.03□□□□□ -1.12
UBX2YML013W RPN1P38764 993 aaKnown RBP8.02□□□□□ -1.13
UBX2YML013W IFH1P39520 1085 aa8□□□□□ -1.13
UBX2YML013W NAP1P25293 417 aaKnown RBP7.98□□□□□ -1.13
UBX2YML013W SSP1P38871 571 aa7.98□□□□□ -1.13
UBX2YML013W IOC4Q04213 475 aa7.9□□□□□ -1.14
UBX2YML013W RPL17AP05740 184 aaKnown RBP7.83□□□□□ -1.16
UBX2YML013W RPL17BP46990 184 aaKnown RBP7.83□□□□□ -1.16
UBX2YML013W NOP2P40991 618 aaKnown RBP7.8□□□□□ -1.16
UBX2YML013W CKB1P43639 278 aa7.8□□□□□ -1.16
UBX2YML013W INO80P53115 1489 aa7.79□□□□□ -1.16
UBX2YML013W ORC1P54784 914 aaPredicted RBP7.77□□□□□ -1.17
UBX2YML013W RIM101P33400 625 aa7.76□□□□□ -1.17
UBX2YML013W MON2P48563 1636 aaPredicted RBP7.74□□□□□ -1.17
UBX2YML013W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
UBX2YML013W ISW2Q08773 1120 aa7.71□□□□□ -1.17
UBX2YML013W SPB4P25808 606 aaPredicted RBP7.69□□□□□ -1.18
UBX2YML013W SPA2P23201 1466 aaKnown RBP7.67□□□□□ -1.18
UBX2YML013W YML020WQ03722 664 aa7.66□□□□□ -1.18
UBX2YML013W YAH1Q12184 172 aaKnown RBP7.66□□□□□ -1.18
UBX2YML013W URN1Q06525 465 aaKnown RBP7.66□□□□□ -1.18
UBX2YML013W REB1P21538 810 aa7.61□□□□□ -1.19
UBX2YML013W SPT21P35209 758 aa7.61□□□□□ -1.19
UBX2YML013W SGS1P35187 1447 aa7.6□□□□□ -1.19
UBX2YML013W RPG1P38249 964 aaKnown RBP7.6□□□□□ -1.19
UBX2YML013W OXP1P28273 1286 aa7.59□□□□□ -1.2
UBX2YML013W YLR271WQ06152 274 aa7.59□□□□□ -1.2
UBX2YML013W NOP8Q08287 484 aaPredicted RBP7.59□□□□□ -1.2
UBX2YML013W HGH1P48362 394 aaKnown RBP7.57□□□□□ -1.2
UBX2YML013W MGA2P40578 1113 aa7.56□□□□□ -1.2
UBX2YML013W SKI3P17883 1432 aaKnown RBP7.55□□□□□ -1.2
UBX2YML013W TCB3Q03640 1545 aaKnown RBP7.54□□□□□ -1.2
UBX2YML013W KIN1P13185 1064 aa7.54□□□□□ -1.2
UBX2YML013W SLX8P40072 274 aa7.54□□□□□ -1.2
UBX2YML013W NSR1P27476 414 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
UBX2YML013W VPS70P47161 811 aa7.5□□□□□ -1.21
UBX2YML013W NOP7P53261 605 aaKnown RBP7.49□□□□□ -1.21
UBX2YML013W SSN2P38931 1420 aa7.48□□□□□ -1.21
UBX2YML013W YIL055CP40523 627 aaKnown RBP7.48□□□□□ -1.21
UBX2YML013W CAB3P36076 571 aa7.46□□□□□ -1.21
UBX2YML013W TY1B-DR4Q07793 1604 aa7.46□□□□□ -1.22
UBX2YML013W EBP2P36049 427 aaKnown RBP7.46□□□□□ -1.22
UBX2YML013W TOP1P04786 769 aa7.45□□□□□ -1.22
UBX2YML013W GEF1P37020 779 aa7.45□□□□□ -1.22
UBX2YML013W SSA1P10591 642 aaKnown RBP7.44□□□□□ -1.22
UBX2YML013W YPR148CQ06523 435 aa7.44□□□□□ -1.22
UBX2YML013W SET1P38827 1080 aaKnown RBP7.43□□□□□ -1.22
UBX2YML013W YNR021WP53723 404 aaKnown RBP7.43□□□□□ -1.22
UBX2YML013W CST9Q06032 482 aa7.43□□□□□ -1.22
UBX2YML013W DNA2P38859 1522 aa7.42□□□□□ -1.22
UBX2YML013W DSF2P38213 736 aa7.41□□□□□ -1.22
UBX2YML013W YRB30P53107 440 aaPredicted RBP7.41□□□□□ -1.22
UBX2YML013W SWR1Q05471 1514 aa7.4□□□□□ -1.23
UBX2YML013W GLC3P32775 704 aa7.37□□□□□ -1.23
UBX2YML013W SNU71P53207 620 aaKnown RBP7.36□□□□□ -1.23
UBX2YML013W SUB2Q07478 446 aaKnown RBP7.36□□□□□ -1.23
UBX2YML013W GUA1P38625 525 aaKnown RBP7.36□□□□□ -1.23
UBX2YML013W AIM7Q12156 149 aa7.36□□□□□ -1.23
UBX2YML013W PBS2P08018 668 aa7.35□□□□□ -1.23
UBX2YML013W BRL1P38770 471 aa7.35□□□□□ -1.23
UBX2YML013W RSM7P47150 247 aa7.34□□□□□ -1.23
UBX2YML013W MAM3Q12296 706 aa7.34□□□□□ -1.23
UBX2YML013W MRX12P47084 519 aa7.33□□□□□ -1.24
UBX2YML013W MET10P39692 1035 aa7.31□□□□□ -1.24
UBX2YML013W RAM2P29703 316 aa7.31□□□□□ -1.24
UBX2YML013W SLD2P34252 453 aa7.3□□□□□ -1.24
UBX2YML013W KOG1P38873 1557 aa7.26□□□□□ -1.25
UBX2YML013W HPC2Q01448 625 aa7.26□□□□□ -1.25
UBX2YML013W PAM1P37304 830 aaKnown RBP7.25□□□□□ -1.25
UBX2YML013W BRN1P38170 754 aa7.25□□□□□ -1.25
UBX2YML013W SPT6P23615 1451 aaKnown RBP7.25□□□□□ -1.25
UBX2YML013W HSL1P34244 1518 aa7.25□□□□□ -1.25
UBX2YML013W TFB3Q03290 321 aa7.24□□□□□ -1.25
UBX2YML013W PSD2P53037 1138 aaKnown RBP7.23□□□□□ -1.25
UBX2YML013W YTA7P40340 1379 aa7.22□□□□□ -1.25
UBX2YML013W IES2P40154 320 aa7.22□□□□□ -1.25
UBX2YML013W DIT2P21595 489 aa7.21□□□□□ -1.25
UBX2YML013W RRN6P32786 894 aa7.2□□□□□ -1.26
UBX2YML013W MAK21Q12176 1025 aaKnown RBP7.2□□□□□ -1.26
UBX2YML013W PRI1P10363 409 aa7.2□□□□□ -1.26
UBX2YML013W SSA4P22202 642 aaKnown RBP7.19□□□□□ -1.26
UBX2YML013W SIS2P36024 562 aa7.19□□□□□ -1.26
UBX2YML013W NUG1P40010 520 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 94.1 ms