RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A CTH1P47976 325 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A SNU71P53207 620 aaKnown RBP2.32□□□□□ -2.04
YLR035C-AYLR035C-A NSI1Q12457 570 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A SAP155P43612 1002 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A CIT3P43635 486 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A EEB1Q02891 456 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A TDA5Q06417 326 aaKnown RBP2.32□□□□□ -2.04
YLR035C-AYLR035C-A BRE4Q07660 1125 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A CMP2P14747 604 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A DBP2P24783 546 aaKnown RBP2.32□□□□□ -2.04
YLR035C-AYLR035C-A SMY2P32909 740 aaKnown RBP2.32□□□□□ -2.04
YLR035C-AYLR035C-A EBP2P36049 427 aaKnown RBP2.32□□□□□ -2.04
YLR035C-AYLR035C-A OYE3P41816 400 aaPredicted RBP2.32□□□□□ -2.04
YLR035C-AYLR035C-A TYW3P53177 273 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A VTS1Q08831 523 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
YLR035C-AYLR035C-A YRM1Q12340 786 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A ENA1P13587 1091 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A PPH3P32345 308 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A SAH1P39954 449 aaKnown RBP2.31□□□□□ -2.04
YLR035C-AYLR035C-A ENA2Q01896 1091 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A VPS72Q03388 795 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A YDR306CQ06640 478 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A RTT10Q08924 1013 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A YPL066WQ12194 479 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A ENA5Q12691 1091 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A ADP1P25371 1049 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A DUT1P33317 147 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A WRS1Q12109 432 aaKnown RBP2.31□□□□□ -2.04
YLR035C-AYLR035C-A YLL054CQ12244 843 aa2.31□□□□□ -2.04
YLR035C-AYLR035C-A GAS1P22146 559 aaKnown RBP2.3□□□□□ -2.04
YLR035C-AYLR035C-A TSR4P25040 408 aa2.3□□□□□ -2.04
YLR035C-AYLR035C-A ECM16Q04217 1267 aaKnown RBP2.3□□□□□ -2.04
YLR035C-AYLR035C-A SPO20Q04359 397 aa2.3□□□□□ -2.04
YLR035C-AYLR035C-A APL1P27351 700 aa2.3□□□□□ -2.04
YLR035C-AYLR035C-A VPS16Q03308 798 aa2.3□□□□□ -2.04
YLR035C-AYLR035C-A SVF1Q05515 481 aa2.3□□□□□ -2.04
YLR035C-AYLR035C-A MSB1P21339 1137 aaKnown RBP2.3□□□□□ -2.04
YLR035C-AYLR035C-A YSC84P32793 468 aa2.3□□□□□ -2.04
YLR035C-AYLR035C-A ALT1P52893 592 aa2.3□□□□□ -2.04
YLR035C-AYLR035C-A NOG1Q02892 647 aaKnown RBP2.3□□□□□ -2.04
YLR035C-AYLR035C-A YPR196WQ06595 470 aa2.3□□□□□ -2.04
YLR035C-AYLR035C-A VMA4P22203 233 aaKnown RBP2.29□□□□□ -2.04
YLR035C-AYLR035C-A ASF1P32447 279 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A YKL107WP34251 309 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A NNK1P36003 928 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A RDH54P38086 958 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A NOP2P40991 618 aaKnown RBP2.29□□□□□ -2.04
YLR035C-AYLR035C-A FOL2P51601 243 aaKnown RBP2.29□□□□□ -2.04
YLR035C-AYLR035C-A YPR071WQ12346 211 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A CDC34P14682 295 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A HXT13P39924 564 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A TIM54P47045 478 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A HXT17P53631 564 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A HXT15P54854 567 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A XYL2Q07993 356 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A OPI10Q08202 246 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A YOR352WQ08816 343 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A NAP1P25293 417 aaKnown RBP2.29□□□□□ -2.04
YLR035C-AYLR035C-A LYP1P32487 611 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A SFB2P53953 876 aa2.29□□□□□ -2.04
YLR035C-AYLR035C-A CYC1P00044 109 aaPredicted RBP2.28□□□□□ -2.04
YLR035C-AYLR035C-A GRX1P25373 110 aaKnown RBP2.28□□□□□ -2.04
YLR035C-AYLR035C-A PGM1P33401 570 aaKnown RBP2.28□□□□□ -2.04
YLR035C-AYLR035C-A GRX7P38068 203 aa2.28□□□□□ -2.04
YLR035C-AYLR035C-A TIF4631P39935 952 aaKnown RBP2.28□□□□□ -2.04
YLR035C-AYLR035C-A CNN1P43618 361 aa2.28□□□□□ -2.04
YLR035C-AYLR035C-A BI4P03879 638 aa2.28□□□□□ -2.04
YLR035C-AYLR035C-A STE5P32917 917 aa2.28□□□□□ -2.04
YLR035C-AYLR035C-A VBA5P36172 582 aa2.28□□□□□ -2.04
YLR035C-AYLR035C-A YBR184WP38299 523 aa2.28□□□□□ -2.04
YLR035C-AYLR035C-A RPS0BP46654 252 aaKnown RBP2.28□□□□□ -2.04
YLR035C-AYLR035C-A DUS3Q06053 668 aaKnown RBP2.28□□□□□ -2.04
YLR035C-AYLR035C-A HRK1Q08732 759 aaKnown RBP2.28□□□□□ -2.04
YLR035C-AYLR035C-A SVS1Q12254 260 aa2.28□□□□□ -2.04
YLR035C-AYLR035C-A PEX7P39108 375 aa2.27□□□□□ -2.05
YLR035C-AYLR035C-A ALR2P43553 858 aa2.27□□□□□ -2.05
YLR035C-AYLR035C-A SPS1P08458 490 aa2.27□□□□□ -2.05
YLR035C-AYLR035C-A PAM1P37304 830 aaKnown RBP2.27□□□□□ -2.05
YLR035C-AYLR035C-A AIM3P38266 947 aaKnown RBP2.27□□□□□ -2.05
YLR035C-AYLR035C-A CDC53Q12018 815 aaKnown RBP2.27□□□□□ -2.05
YLR035C-AYLR035C-A RAD4P14736 754 aa2.27□□□□□ -2.05
YLR035C-AYLR035C-A ARE1P25628 610 aa2.27□□□□□ -2.05
YLR035C-AYLR035C-A PRP43P53131 767 aaKnown RBP2.27□□□□□ -2.05
YLR035C-AYLR035C-A SIW14P53965 281 aa2.27□□□□□ -2.05
YLR035C-AYLR035C-A UGA2P38067 497 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A YRO2P38079 344 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A GNP1P48813 663 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A INP52P50942 1183 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A HOS3Q02959 697 aaKnown RBP2.26□□□□□ -2.05
YLR035C-AYLR035C-A YDL177CQ12257 170 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A GLT1Q12680 2145 aaKnown RBP2.26□□□□□ -2.05
YLR035C-AYLR035C-A COQ4O13525 335 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A CLN2P20438 545 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A AAR2P32357 355 aaPredicted RBP2.26□□□□□ -2.05
YLR035C-AYLR035C-A HUL5P53119 910 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A BUD21Q08492 214 aaPredicted RBP2.26□□□□□ -2.05
YLR035C-AYLR035C-A SAM35P14693 329 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A SRP40P32583 406 aaPredicted RBP2.26□□□□□ -2.05
YLR035C-AYLR035C-A CCC2P38995 1004 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A SIP5P40210 489 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 197.4 ms