RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W YML119WQ03208 357 aa5.18□□□□□ -1.58
ABF1YKL112W MSH6Q03834 1242 aa5.18□□□□□ -1.58
ABF1YKL112W YDR338CQ05497 695 aa5.18□□□□□ -1.58
ABF1YKL112W YLR352WQ06479 807 aa5.18□□□□□ -1.58
ABF1YKL112W SWA2Q06677 668 aa5.18□□□□□ -1.58
ABF1YKL112W YRM1Q12340 786 aa5.18□□□□□ -1.58
ABF1YKL112W RRP36Q12481 300 aaPredicted RBP5.18□□□□□ -1.58
ABF1YKL112W YGR161W-CQ3E744 92 aa5.18□□□□□ -1.58
ABF1YKL112W THR4P16120 514 aaKnown RBP5.17□□□□□ -1.58
ABF1YKL112W ACE2P21192 770 aa5.17□□□□□ -1.58
ABF1YKL112W PUF4P25339 888 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
ABF1YKL112W POL4P25615 582 aa5.17□□□□□ -1.58
ABF1YKL112W RME1P32338 300 aaKnown RBP5.17□□□□□ -1.58
ABF1YKL112W PAH1P32567 862 aa5.17□□□□□ -1.58
ABF1YKL112W BEM4P39011 633 aa5.17□□□□□ -1.58
ABF1YKL112W DAK2P43550 591 aa5.17□□□□□ -1.58
ABF1YKL112W DAS1P47005 663 aa5.17□□□□□ -1.58
ABF1YKL112W YGL082WP53155 381 aa5.17□□□□□ -1.58
ABF1YKL112W FOL1P53848 824 aa5.17□□□□□ -1.58
ABF1YKL112W RAD33Q04231 177 aa5.17□□□□□ -1.58
ABF1YKL112W NUM1Q00402 2748 aa5.16□□□□□ -1.58
ABF1YKL112W TOM70P07213 617 aaKnown RBP5.16□□□□□ -1.58
ABF1YKL112W WHI3P34761 661 aaKnown RBP5.16□□□□□ -1.58
ABF1YKL112W APL2P36000 726 aaPredicted RBP5.16□□□□□ -1.58
ABF1YKL112W STV1P37296 890 aa5.16□□□□□ -1.58
ABF1YKL112W FMP10P40098 244 aa5.16□□□□□ -1.58
ABF1YKL112W RAD26P40352 1085 aa5.16□□□□□ -1.58
ABF1YKL112W BTN2P53286 410 aa5.16□□□□□ -1.58
ABF1YKL112W ZDS2P54786 942 aa5.16□□□□□ -1.58
ABF1YKL112W RPN4Q03465 531 aa5.16□□□□□ -1.58
ABF1YKL112W SGD1Q06132 899 aa5.16□□□□□ -1.58
ABF1YKL112W ESF1Q06344 628 aaKnown RBP5.16□□□□□ -1.58
ABF1YKL112W HIM1Q06674 414 aa5.16□□□□□ -1.58
ABF1YKL112W RRG1Q12167 365 aaPredicted RBP5.16□□□□□ -1.58
ABF1YKL112W WHI5Q12416 295 aa5.16□□□□□ -1.58
ABF1YKL112W MST1P07236 462 aa5.16□□□□□ -1.58
ABF1YKL112W ARG8P18544 423 aa5.16□□□□□ -1.58
ABF1YKL112W SRP54P20424 541 aaKnown RBP5.16□□□□□ -1.58
ABF1YKL112W RAD27P26793 382 aa5.16□□□□□ -1.58
ABF1YKL112W BUD14P27637 709 aa5.16□□□□□ -1.58
ABF1YKL112W PEX6P33760 1030 aa5.16□□□□□ -1.58
ABF1YKL112W YLF2P38746 405 aa5.16□□□□□ -1.58
ABF1YKL112W RRF1P38771 230 aa5.16□□□□□ -1.58
ABF1YKL112W CCT3P39077 534 aaKnown RBP5.16□□□□□ -1.58
ABF1YKL112W SWD1P39706 426 aa5.16□□□□□ -1.58
ABF1YKL112W IES5P40060 125 aa5.16□□□□□ -1.58
ABF1YKL112W BUD6P41697 788 aa5.16□□□□□ -1.58
ABF1YKL112W HOP2P53187 214 aa5.16□□□□□ -1.58
ABF1YKL112W PEX8P53248 589 aa5.16□□□□□ -1.58
ABF1YKL112W RTC4P53850 401 aa5.16□□□□□ -1.58
ABF1YKL112W YDR286CQ05530 114 aa5.16□□□□□ -1.58
ABF1YKL112W ATG38Q05789 226 aaKnown RBP5.16□□□□□ -1.58
ABF1YKL112W ORM2Q06144 216 aa5.16□□□□□ -1.58
ABF1YKL112W RTP1Q12751 981 aa5.16□□□□□ -1.58
ABF1YKL112W TIF1P10081 395 aaKnown RBP5.15□□□□□ -1.58
ABF1YKL112W MEF1P25039 761 aa5.15□□□□□ -1.58
ABF1YKL112W KCC4P25389 1037 aa5.15□□□□□ -1.58
ABF1YKL112W KIP2P28743 706 aa5.15□□□□□ -1.58
ABF1YKL112W TPD3P31383 635 aa5.15□□□□□ -1.58
ABF1YKL112W AFG2P32794 780 aa5.15□□□□□ -1.58
ABF1YKL112W ASH1P34233 588 aa5.15□□□□□ -1.58
ABF1YKL112W JNM1P36224 373 aa5.15□□□□□ -1.58
ABF1YKL112W RTG3P38165 486 aa5.15□□□□□ -1.58
ABF1YKL112W MNN1P39106 762 aa5.15□□□□□ -1.58
ABF1YKL112W VAC8P39968 578 aa5.15□□□□□ -1.58
ABF1YKL112W ULP1Q02724 621 aa5.15□□□□□ -1.58
ABF1YKL112W VPS20Q04272 221 aa5.15□□□□□ -1.58
ABF1YKL112W UTP14Q04500 899 aaKnown RBP5.15□□□□□ -1.58
ABF1YKL112W UTP13Q05946 817 aaKnown RBP5.15□□□□□ -1.58
ABF1YKL112W YLH47Q06493 454 aa5.15□□□□□ -1.58
ABF1YKL112W PGS1P25578 521 aa5.15□□□□□ -1.59
ABF1YKL112W PSO2P30620 661 aa5.15□□□□□ -1.59
ABF1YKL112W UTP18P40362 594 aaPredicted RBP5.15□□□□□ -1.59
ABF1YKL112W SPR3P41901 512 aa5.15□□□□□ -1.59
ABF1YKL112W SET4P42948 560 aa5.15□□□□□ -1.59
ABF1YKL112W VTC4P47075 721 aa5.15□□□□□ -1.59
ABF1YKL112W ATP22P50273 684 aaPredicted RBP5.15□□□□□ -1.59
ABF1YKL112W UBX2Q04228 584 aa5.15□□□□□ -1.59
ABF1YKL112W SPO20Q04359 397 aa5.15□□□□□ -1.59
ABF1YKL112W AOS1Q06624 347 aa5.15□□□□□ -1.59
ABF1YKL112W STE11P23561 717 aa5.14□□□□□ -1.59
ABF1YKL112W EFB1P32471 206 aaKnown RBP5.14□□□□□ -1.59
ABF1YKL112W RRN3P36070 627 aa5.14□□□□□ -1.59
ABF1YKL112W SET2P46995 733 aaKnown RBP5.14□□□□□ -1.59
ABF1YKL112W POL32P47110 350 aa5.14□□□□□ -1.59
ABF1YKL112W ALR1Q08269 859 aa5.14□□□□□ -1.59
ABF1YKL112W MSC6Q08818 692 aaKnown RBP5.14□□□□□ -1.59
ABF1YKL112W CBP1P07252 654 aa5.14□□□□□ -1.59
ABF1YKL112W RAM2P29703 316 aa5.14□□□□□ -1.59
ABF1YKL112W MTC2P34246 357 aa5.14□□□□□ -1.59
ABF1YKL112W UBP13P38187 747 aa5.14□□□□□ -1.59
ABF1YKL112W SMC3P47037 1230 aa5.14□□□□□ -1.59
ABF1YKL112W ALF1P53904 254 aa5.14□□□□□ -1.59
ABF1YKL112W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
ABF1YKL112W CWC21Q03375 135 aaKnown RBP5.14□□□□□ -1.59
ABF1YKL112W ECM30Q06673 1274 aa5.14□□□□□ -1.59
ABF1YKL112W YIL002W-AQ3E7Z5 69 aa5.14□□□□□ -1.59
ABF1YKL112W FLO1P32768 1537 aa5.13□□□□□ -1.59
ABF1YKL112W TOR2P32600 2474 aaKnown RBP5.13□□□□□ -1.59
ABF1YKL112W PEX18P38855 283 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms