RNA–Protein interactions for RNA: YJR092W

BUD4, Transcript of Anillin-like protein involved in bud-site selection, yeast

Gene BUD4, Length 4,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD4	YJR092W	CCL1	P37366	393 aa		3.21	□□□□□ -1.9
BUD4	YJR092W	TPS3	P38426	1054 aa	Known RBP	3.21	□□□□□ -1.9
BUD4	YJR092W	RGA1	P39083	1007 aa		3.21	□□□□□ -1.9
BUD4	YJR092W	HMF1	P40037	129 aa	Known RBP	3.21	□□□□□ -1.9
BUD4	YJR092W	SWM2	P40342	146 aa		3.21	□□□□□ -1.9
BUD4	YJR092W	EEB1	Q02891	456 aa		3.21	□□□□□ -1.9
BUD4	YJR092W	YLR297W	Q05899	129 aa		3.21	□□□□□ -1.9
BUD4	YJR092W	CDC73	Q06697	393 aa		3.21	□□□□□ -1.9
BUD4	YJR092W	EFG1	Q3E705	233 aa	Known RBP	3.21	□□□□□ -1.9
BUD4	YJR092W	AI4	P03878	556 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	PCT1	P13259	424 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	ARG8	P18544	423 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	SUI2	P20459	304 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	VMA4	P22203	233 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	PEP3	P27801	918 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	SLI15	P38283	698 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	VPS41	P38959	992 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	RPN3	P40016	523 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	YER156C	P40093	338 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	SPR3	P41901	512 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	DAN4	P47179	1161 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	VID30	P53076	958 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	ZPR1	P53303	486 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	SPE3	Q12074	293 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	CDC25	P04821	1589 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	MST1	P07236	462 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	TIF1	P10081	395 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	GFA1	P14742	717 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	NTH2	P35172	780 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	CRG1	P38892	291 aa	RIP-Chip data	3.2	□□□□□ -1.9	not detected
BUD4	YJR092W	SOL4	P53315	255 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	SUB2	Q07478	446 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	RIP-Chip
BUD4	YJR092W	TUM1	Q08686	304 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	NOT5	Q12514	560 aa	Predicted RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	KDX1	P36005	433 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	JNM1	P36224	373 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	ADE17	P38009	592 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	ECM21	P38167	1117 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	RTS1	P38903	757 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	YMR147W	P40218	223 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	RIC1	P40395	1056 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	OSW7	P43611	510 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	YNL108C	P53929	270 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	DOS2	P54858	310 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	YML119W	Q03208	357 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	SMD2	Q06217	110 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	BDF2	Q07442	638 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	YOR296W	Q08748	1289 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	YVC1	Q12324	675 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	RPS19A	P07280	144 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	RPS19B	P07281	144 aa	Predicted RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	APL1	P27351	700 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	VTC2	P43585	828 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	KAP114	P53067	1004 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	YGL140C	P53120	1219 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	LSG1	P53145	640 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	BET4	Q00618	327 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	CWC21	Q03375	135 aa	Known RBP	3.2	□□□□□ -1.9
BUD4	YJR092W	OPT2	Q06593	877 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	YOL098C	Q12496	1037 aa		3.2	□□□□□ -1.9
BUD4	YJR092W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
BUD4	YJR092W	PMS1	P14242	873 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	CKA2	P19454	339 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	RTG2	P32608	588 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	YIL092W	P40497	633 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	GCN20	P43535	752 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	YFR018C	P43599	363 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	RTA1	P53047	317 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	NHP10	Q03435	203 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	YMR226C	Q05016	267 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	YPR097W	Q06839	1073 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	ADY3	Q07732	790 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	SLX4	Q12098	748 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	RAD59	Q12223	238 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	NUP145	P49687	1317 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	CMD1	P06787	147 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	POL30	P15873	258 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	CKI1	P20485	582 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	YJU3	P28321	313 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	MCD4	P36051	919 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	APL6	P46682	809 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	MAL11	P53048	616 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	SRT1	Q03175	343 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	RRB1	Q04225	511 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	HFD1	Q04458	532 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	MED1	Q12321	566 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	DBP3	P20447	523 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	RPL8B	P29453	256 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	ATP7	P30902	174 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	SWI3	P32591	825 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	SEC66	P33754	206 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	MUM2	P38236	366 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	MNN11	P46985	422 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	YNL144C	P53907	740 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	RRP6	Q12149	733 aa	Known RBP	3.19	□□□□□ -1.9
BUD4	YJR092W	LSO1	Q3E827	93 aa		3.19	□□□□□ -1.9
BUD4	YJR092W	PRP16	P15938	1071 aa	Predicted RBP	3.18	□□□□□ -1.9
BUD4	YJR092W	SEC21	P32074	935 aa	Known RBP	3.18	□□□□□ -1.9
BUD4	YJR092W	NDI1	P32340	513 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms