RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C HMLALPHA2P0CY09 210 aa15.13■□□□□ 0.01
SHU1YHL006C CLB5P30283 435 aa15.13■□□□□ 0.01
SHU1YHL006C FOL2P51601 243 aaKnown RBP15.13■□□□□ 0.01
SHU1YHL006C YGL138CP53122 345 aa15.13■□□□□ 0.01
SHU1YHL006C YGR273CP53329 174 aa15.13■□□□□ 0.01
SHU1YHL006C FKS1P38631 1876 aaKnown RBP15.12■□□□□ 0.01
SHU1YHL006C TVP38P36164 337 aa15.12■□□□□ 0.01
SHU1YHL006C ISW1P38144 1129 aa15.12■□□□□ 0.01
SHU1YHL006C INP51P40559 946 aaKnown RBP15.12■□□□□ 0.01
SHU1YHL006C TVP23P38962 199 aa15.11■□□□□ 0.01
SHU1YHL006C HMF1P40037 129 aaKnown RBP15.11■□□□□ 0.01
SHU1YHL006C YKE2P52553 114 aa15.11■□□□□ 0.01
SHU1YHL006C HUL5P53119 910 aa15.11■□□□□ 0.01
SHU1YHL006C GDE1Q02979 1223 aa15.11■□□□□ 0.01
SHU1YHL006C OYE2Q03558 400 aaKnown RBP15.11■□□□□ 0.01
SHU1YHL006C TSR3Q12094 313 aaKnown RBP15.11■□□□□ 0.01
SHU1YHL006C CAD1P24813 409 aaKnown RBP15.1■□□□□ 0.01
SHU1YHL006C RPN10P38886 268 aaKnown RBP15.1■□□□□ 0.01
SHU1YHL006C BNI5P53890 448 aaKnown RBP15.1■□□□□ 0.01
SHU1YHL006C AIM33Q04516 312 aa15.1■□□□□ 0.01
SHU1YHL006C ESS1P22696 170 aa15.09■□□□□ 0.01
SHU1YHL006C OPY1P38271 328 aa15.09■□□□□ 0.01
SHU1YHL006C YML020WQ03722 664 aa15.09■□□□□ 0.01
SHU1YHL006C GPI13Q07830 1017 aa15.09■□□□□ 0.01
SHU1YHL006C YDR034W-BQ6Q5X2 51 aa15.09■□□□□ 0.01
SHU1YHL006C CIT3P43635 486 aa15.08■□□□□ 0
SHU1YHL006C SRO9P25567 434 aaKnown RBP15.07■□□□□ 0
SHU1YHL006C ALD5P40047 520 aaKnown RBP15.07■□□□□ 0
SHU1YHL006C UBP10P53874 792 aaPredicted RBP15.07■□□□□ 0
SHU1YHL006C CRD1Q07560 283 aa15.07■□□□□ 0
SHU1YHL006C VPS1P21576 704 aaKnown RBP15.06■□□□□ 0
SHU1YHL006C AFT1P22149 690 aa15.06■□□□□ 0
SHU1YHL006C IRE1P32361 1115 aa15.06■□□□□ 0
SHU1YHL006C SAS3P34218 831 aa15.06■□□□□ 0
SHU1YHL006C BRL1P38770 471 aa15.06■□□□□ 0
SHU1YHL006C YEL025CP39991 1188 aa15.06■□□□□ 0
SHU1YHL006C SAD1P43589 448 aa15.06■□□□□ 0
SHU1YHL006C PSP2P50109 593 aaKnown RBP15.06■□□□□ 0
SHU1YHL006C SVF1Q05515 481 aa15.06■□□□□ 0
SHU1YHL006C YLR407WQ06070 228 aa15.06■□□□□ 0
SHU1YHL006C PGK1P00560 416 aaKnown RBP15.05■□□□□ -0
SHU1YHL006C ORC6P38826 435 aa15.05■□□□□ -0
SHU1YHL006C GAA1P39012 614 aa15.05■□□□□ -0
SHU1YHL006C JHD1P40034 492 aa15.05■□□□□ -0
SHU1YHL006C GPD2P41911 440 aaKnown RBP15.05■□□□□ -0
SHU1YHL006C DSE4P53753 1117 aa15.05■□□□□ -0
SHU1YHL006C PHM6Q05637 104 aa15.05■□□□□ -0
SHU1YHL006C ILV1P00927 576 aaKnown RBP15.04■□□□□ -0
SHU1YHL006C CDC6P09119 513 aa15.04■□□□□ -0
SHU1YHL006C POA1P38218 177 aa15.04■□□□□ -0
SHU1YHL006C ZPR1P53303 486 aaKnown RBP15.04■□□□□ -0
SHU1YHL006C RET3P53600 189 aa15.04■□□□□ -0
SHU1YHL006C RIF1P29539 1916 aa15.04■□□□□ -0
SHU1YHL006C RME1P32338 300 aaKnown RBP15.03■□□□□ -0
SHU1YHL006C RSC8P43609 557 aaKnown RBP15.03■□□□□ -0
SHU1YHL006C CSM3Q04659 317 aa15.03■□□□□ -0
SHU1YHL006C SMY2P32909 740 aaKnown RBP15.02■□□□□ -0
SHU1YHL006C NAF1P53919 492 aaKnown RBP15.02■□□□□ -0
SHU1YHL006C CBP3P21560 335 aa15.01□□□□□ -0.01
SHU1YHL006C UBC1P21734 215 aaKnown RBP15.01□□□□□ -0.01
SHU1YHL006C GUA1P38625 525 aaKnown RBP15.01□□□□□ -0.01
SHU1YHL006C BRE2P43132 505 aa15.01□□□□□ -0.01
SHU1YHL006C ENT3P47160 408 aa15.01□□□□□ -0.01
SHU1YHL006C MDR1P53258 950 aa15.01□□□□□ -0.01
SHU1YHL006C DIP5P53388 608 aa15.01□□□□□ -0.01
SHU1YHL006C CNM67P53865 581 aaKnown RBP15.01□□□□□ -0.01
SHU1YHL006C MFM1Q02783 413 aa15.01□□□□□ -0.01
SHU1YHL006C PGM1P33401 570 aaKnown RBP15□□□□□ -0.01
SHU1YHL006C CUS1Q02554 436 aaPredicted RBP15□□□□□ -0.01
SHU1YHL006C CEX1Q12453 761 aa15□□□□□ -0.01
SHU1YHL006C RNR2P09938 399 aaKnown RBP14.99□□□□□ -0.01
SHU1YHL006C SWI6P09959 803 aa14.99□□□□□ -0.01
SHU1YHL006C SUP45P12385 437 aaKnown RBP14.99□□□□□ -0.01
SHU1YHL006C CDC48P25694 835 aaKnown RBP14.99□□□□□ -0.01
SHU1YHL006C MSS51P32335 436 aa14.99□□□□□ -0.01
SHU1YHL006C SUV3P32580 737 aa14.99□□□□□ -0.01
SHU1YHL006C YHL017WP38745 532 aa14.99□□□□□ -0.01
SHU1YHL006C ATG32P40458 529 aa14.99□□□□□ -0.01
SHU1YHL006C CTF18P49956 741 aa14.99□□□□□ -0.01
SHU1YHL006C TRS120Q04183 1289 aa14.99□□□□□ -0.01
SHU1YHL006C YMR084WA2P2R3 262 aa14.98□□□□□ -0.01
SHU1YHL006C THR4P16120 514 aaKnown RBP14.98□□□□□ -0.01
SHU1YHL006C NCR1Q12200 1170 aa14.98□□□□□ -0.01
SHU1YHL006C CLN3P13365 580 aa14.97□□□□□ -0.01
SHU1YHL006C GSY1P23337 708 aa14.97□□□□□ -0.01
SHU1YHL006C BUD6P41697 788 aa14.97□□□□□ -0.01
SHU1YHL006C MCM6P53091 1017 aaKnown RBP14.97□□□□□ -0.01
SHU1YHL006C YGR035CP53222 116 aa14.97□□□□□ -0.01
SHU1YHL006C SLK19Q08581 821 aaKnown RBP14.97□□□□□ -0.01
SHU1YHL006C HSP82P02829 709 aaKnown RBP14.96□□□□□ -0.01
SHU1YHL006C FUB1P25659 250 aa14.96□□□□□ -0.01
SHU1YHL006C STT3P39007 718 aaKnown RBP14.96□□□□□ -0.01
SHU1YHL006C DED1P06634 604 aaKnown RBP14.95□□□□□ -0.02
SHU1YHL006C FIS1P40515 155 aa14.95□□□□□ -0.02
SHU1YHL006C SPO74P45819 413 aa14.95□□□□□ -0.02
SHU1YHL006C RPC31P17890 251 aa14.94□□□□□ -0.02
SHU1YHL006C ACF4P47129 309 aa14.94□□□□□ -0.02
SHU1YHL006C DCS2Q12123 353 aa14.94□□□□□ -0.02
SHU1YHL006C GET3Q12154 354 aaKnown RBP14.94□□□□□ -0.02
SHU1YHL006C EFT1P32324 842 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms