RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W FPS1P23900 669 aa7.78□□□□□ -1.16
MSP1YGR028W YIR042CP40586 236 aa7.78□□□□□ -1.16
MSP1YGR028W SYT1Q06836 1226 aa7.78□□□□□ -1.16
MSP1YGR028W CDC45Q08032 650 aa7.78□□□□□ -1.16
MSP1YGR028W ADR1P07248 1323 aa7.78□□□□□ -1.16
MSP1YGR028W BSD2P38356 321 aa7.77□□□□□ -1.17
MSP1YGR028W NUG1P40010 520 aaKnown RBP7.77□□□□□ -1.17
MSP1YGR028W YFH7P43591 353 aa7.77□□□□□ -1.17
MSP1YGR028W ADE12P80210 433 aaKnown RBP7.77□□□□□ -1.17
MSP1YGR028W HEH2Q03281 663 aa7.77□□□□□ -1.17
MSP1YGR028W HPF1Q05164 967 aa7.77□□□□□ -1.17
MSP1YGR028W APC11Q12157 165 aa7.77□□□□□ -1.17
MSP1YGR028W RPS19AP07280 144 aaKnown RBP7.76□□□□□ -1.17
MSP1YGR028W RPS19BP07281 144 aaPredicted RBP7.76□□□□□ -1.17
MSP1YGR028W SEC18P18759 758 aaKnown RBP7.76□□□□□ -1.17
MSP1YGR028W RRT6P53117 311 aaPredicted RBP7.76□□□□□ -1.17
MSP1YGR028W ACK1Q07622 623 aaPredicted RBP7.76□□□□□ -1.17
MSP1YGR028W NCL1P38205 684 aaKnown RBP7.75□□□□□ -1.17
MSP1YGR028W BOL3P39724 118 aa7.75□□□□□ -1.17
MSP1YGR028W NIT1P40447 199 aa7.75□□□□□ -1.17
MSP1YGR028W YIL092WP40497 633 aa7.75□□□□□ -1.17
MSP1YGR028W JJJ3P47138 172 aa7.75□□□□□ -1.17
MSP1YGR028W YNL193WP53870 558 aa7.75□□□□□ -1.17
MSP1YGR028W CUS1Q02554 436 aaPredicted RBP7.75□□□□□ -1.17
MSP1YGR028W INM2Q05533 292 aa7.75□□□□□ -1.17
MSP1YGR028W PTK1P36002 662 aaPredicted RBP7.74□□□□□ -1.17
MSP1YGR028W APM2P38700 605 aa7.74□□□□□ -1.17
MSP1YGR028W YNG2P38806 282 aaKnown RBP7.74□□□□□ -1.17
MSP1YGR028W ATG1P53104 897 aa7.74□□□□□ -1.17
MSP1YGR028W YOR296WQ08748 1289 aa7.74□□□□□ -1.17
MSP1YGR028W PSF3Q12146 194 aa7.74□□□□□ -1.17
MSP1YGR028W RRI2Q12348 645 aa7.74□□□□□ -1.17
MSP1YGR028W MDL2P33311 773 aa7.73□□□□□ -1.17
MSP1YGR028W ISW1P38144 1129 aa7.73□□□□□ -1.17
MSP1YGR028W GIP1P38229 639 aa7.73□□□□□ -1.17
MSP1YGR028W KEL1P38853 1164 aaKnown RBP7.73□□□□□ -1.17
MSP1YGR028W FUN12P39730 1002 aaKnown RBP7.73□□□□□ -1.17
MSP1YGR028W FIR1P40020 876 aa7.73□□□□□ -1.17
MSP1YGR028W HXT8P40886 569 aa7.73□□□□□ -1.17
MSP1YGR028W ACF4P47129 309 aa7.73□□□□□ -1.17
MSP1YGR028W SPO1P53541 631 aa7.73□□□□□ -1.17
MSP1YGR028W RPN7Q06103 429 aaKnown RBP7.73□□□□□ -1.17
MSP1YGR028W PFK2P16862 959 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
MSP1YGR028W TRK2P28584 889 aa7.72□□□□□ -1.17
MSP1YGR028W APE3P37302 537 aaKnown RBP7.72□□□□□ -1.17
MSP1YGR028W GLO3P38682 493 aaKnown RBP7.72□□□□□ -1.17
MSP1YGR028W NSG2P53898 299 aa7.72□□□□□ -1.17
MSP1YGR028W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
MSP1YGR028W SMC1P32908 1225 aa7.71□□□□□ -1.18
MSP1YGR028W MOT2P34909 587 aaKnown RBP7.71□□□□□ -1.18
MSP1YGR028W BOI1P38041 980 aaKnown RBP7.71□□□□□ -1.18
MSP1YGR028W SNF3P10870 884 aa7.7□□□□□ -1.18
MSP1YGR028W PAM1P37304 830 aaKnown RBP7.7□□□□□ -1.18
MSP1YGR028W NCS6P53088 359 aa7.7□□□□□ -1.18
MSP1YGR028W RBA50Q04418 439 aa7.7□□□□□ -1.18
MSP1YGR028W MSN1P22148 382 aa7.69□□□□□ -1.18
MSP1YGR028W SSF1P38789 453 aaPredicted RBP7.69□□□□□ -1.18
MSP1YGR028W QDR1P40475 563 aa7.69□□□□□ -1.18
MSP1YGR028W GIN4Q12263 1142 aa7.69□□□□□ -1.18
MSP1YGR028W PMA1P05030 918 aaKnown RBP7.68□□□□□ -1.18
MSP1YGR028W RAD2P07276 1031 aa7.68□□□□□ -1.18
MSP1YGR028W TRL1P09880 827 aaKnown RBP7.68□□□□□ -1.18
MSP1YGR028W RAD53P22216 821 aa7.68□□□□□ -1.18
MSP1YGR028W ADP1P25371 1049 aa7.68□□□□□ -1.18
MSP1YGR028W GCD7P32502 381 aaPredicted RBP7.68□□□□□ -1.18
MSP1YGR028W SUT1P53032 299 aaKnown RBP7.68□□□□□ -1.18
MSP1YGR028W UFD2P54860 961 aa7.68□□□□□ -1.18
MSP1YGR028W TY1A-DR2Q03964 440 aaKnown RBP7.68□□□□□ -1.18
MSP1YGR028W PPM2Q08282 695 aa7.68□□□□□ -1.18
MSP1YGR028W YBL113CQ7M4S9 792 aa7.68□□□□□ -1.18
MSP1YGR028W MSC7P38694 644 aa7.67□□□□□ -1.18
MSP1YGR028W NTA1P40354 457 aa7.67□□□□□ -1.18
MSP1YGR028W SGD1Q06132 899 aa7.67□□□□□ -1.18
MSP1YGR028W GRX7P38068 203 aa7.66□□□□□ -1.18
MSP1YGR028W KTR3P38130 404 aaPredicted RBP7.66□□□□□ -1.18
MSP1YGR028W RSC2Q06488 889 aa7.66□□□□□ -1.18
MSP1YGR028W PIF1P07271 859 aa7.65□□□□□ -1.18
MSP1YGR028W KNS1P32350 737 aaPredicted RBP7.65□□□□□ -1.18
MSP1YGR028W YBL028CP38202 106 aa7.65□□□□□ -1.18
MSP1YGR028W ERP5P38819 212 aa7.65□□□□□ -1.18
MSP1YGR028W YRB30P53107 440 aaPredicted RBP7.65□□□□□ -1.18
MSP1YGR028W NCB2Q92317 146 aa7.65□□□□□ -1.18
MSP1YGR028W DUR1,2P32528 1835 aaKnown RBP7.64□□□□□ -1.19
MSP1YGR028W GPM1P00950 247 aaKnown RBP7.64□□□□□ -1.19
MSP1YGR028W TUB2P02557 457 aaKnown RBP7.64□□□□□ -1.19
MSP1YGR028W RPB10P22139 70 aa7.64□□□□□ -1.19
MSP1YGR028W RAD55P38953 406 aa7.64□□□□□ -1.19
MSP1YGR028W ACA1P39970 489 aa7.64□□□□□ -1.19
MSP1YGR028W PIP2P52960 996 aa7.64□□□□□ -1.19
MSP1YGR028W YNR040WP53736 256 aa7.64□□□□□ -1.19
MSP1YGR028W PRS1P32895 427 aaKnown RBP7.63□□□□□ -1.19
MSP1YGR028W KTR2P33550 425 aa7.63□□□□□ -1.19
MSP1YGR028W GRS1P38088 690 aaKnown RBP7.63□□□□□ -1.19
MSP1YGR028W STM1P39015 273 aaKnown RBP7.63□□□□□ -1.19
MSP1YGR028W YGL242CP53066 181 aa7.63□□□□□ -1.19
MSP1YGR028W YLR225CQ05948 407 aaKnown RBP7.63□□□□□ -1.19
MSP1YGR028W AI1P03875 834 aa7.62□□□□□ -1.19
MSP1YGR028W NAB2P32505 525 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19 RIP-Chip
MSP1YGR028W MAC1P35192 417 aa7.62□□□□□ -1.19
MSP1YGR028W IRS4P36115 615 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms